KEGG   Leptolyngbya boryana: LBWT_10620
Entry
LBWT_10620        CDS       T04848                                 
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
lbo  Leptolyngbya boryana
Brite
KEGG Orthology (KO) [BR:lbo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lbo03009]
    LBWT_10620
Enzymes [BR:lbo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LBWT_10620
Ribosome biogenesis [BR:lbo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LBWT_10620
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 TRAM Methyltransf_25 MTS Methyltransf_15 Met_10 DOT1 PrmA Methyltransf_11 RrnaAD QRPTase_C Methyltransf_4 Methyltransf_12 PCMT Methyltransf_32 TPMT N6_N4_Mtase Ubie_methyltran
Other DBs
NCBI-ProteinID: BAS55156
Position
1177290..1178690
AA seq 466 aa
MPTQLDTSFSDNTTEWRQGELLEVTITDLSDRGDGVGRAGSRVVFVPDTVTGDRALVRLM
HVKPNLAHAKLYKLLEASPHRIRPGCIVADKCGGCQWQHVDYDYQREAKRNQVVQALERI
GGFRNIAVDPVLNVSEPLHYRNKSTYPLGSSNTRQVQAGYYQKGTHQIVNLNQCPIQDER
LNPLLAEVKQDIQQQGWRIYDEKYHRGQLRHLALRIGQRTGEILLTLITADPDLPNLEEQ
AQEWLQRYENLVGVSLNVQRDRTNAIFGSETHCIAGQPFLSERFANLTFHIRPDTFFQVH
TEQTEALLNIVLEQLNLQGDETFVDAYCGIGTMTLPIAQRVKTAIGLEIQPEAIEQAQQN
ASLNGIENVRFEVGAVEKVLQSLEIHPDLVMLDPPRKGCNATVLETLRQQKPKQIVYVSC
NAATLARDLKLLCADDAYQLIRVQPADFFPQTAHVECAAFLNRVEE
NT seq 1401 nt   +upstreamnt  +downstreamnt
gtgcccacacaattagacacatcattcagcgataacactacggaatggcggcaaggtgaa
ttgctggaagtcacgattaccgatttgagcgatcgcggtgatggagtaggtcgcgcaggc
tcacgggtcgtctttgtgcccgatacggtcaccggcgatcgcgctttagtccgattgatg
cacgtcaagccgaatcttgctcatgcgaagttatacaaactcctcgaagcttcgccccat
cggattcgacccggctgtattgttgctgacaagtgcggcggctgtcagtggcagcatgtc
gattatgactatcaacgagaagcgaaacggaatcaggtcgttcaggcattagagcgaatt
ggcggatttcgtaacattgcagttgatcccgttctgaatgtgagcgaacctctgcactat
cgcaacaaatcgacttatccactcggaagttccaacacgcgacaagttcaagcgggatac
tatcaaaaaggcacgcatcagattgtaaatctgaatcagtgcccgattcaggatgagcga
ttgaatcctttactggctgaagtcaaacaggacattcagcagcagggatggcgaatctat
gatgagaaatatcatcgcggtcaattgcggcatttagccttaagaattgggcagcgcaca
ggtgaaatcttgctgacgttgattacggctgatccagacttgccgaatttagaagagcag
gctcaggaatggctgcaacgctatgagaatttagtcggtgtgtcgctgaatgtacagcgc
gatcgcacgaatgccatttttggttcagagacacattgcatcgcaggtcagcctttcctc
tcagaacgattcgcaaatctgacgttccacatccgacccgatactttctttcaagtccat
actgaacaaactgaagctttgttaaacattgttttggaacagttaaacttacaaggtgac
gaaacatttgttgatgcttattgtggaattggaacaatgactttaccgatcgcacaacgt
gtcaaaactgcgatcggattagaaattcaaccggaagcgattgaacaagctcaacagaac
gcaagtttgaatggaatcgagaacgtcagatttgaagtgggagcggttgaaaaagtttta
caatcgcttgagattcatccggatttagtcatgctcgatccacctcgtaaaggatgtaat
gcaactgttttggagacgcttcgacaacagaaacctaagcaaattgtttacgtcagttgt
aatgctgcgacattagcacgagatctgaaattgttatgtgcagatgatgcctatcaactg
atacgggttcagcctgcggactttttcccgcagacggctcatgttgaatgtgctgctttt
ttaaaccgagtggaggagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (27)   

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