KEGG   Levilactobacillus brevis ATCC 367: LVIS_0505
Entry
LVIS_0505         CDS       T00406                                 
Name
(GenBank) Superfamily II DNA and RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
lbr  Levilactobacillus brevis ATCC 367
Pathway
lbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LVIS_0505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbr03019]
    LVIS_0505
   03009 Ribosome biogenesis [BR:lbr03009]
    LVIS_0505
Enzymes [BR:lbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     LVIS_0505
Messenger RNA biogenesis [BR:lbr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     LVIS_0505
Ribosome biogenesis [BR:lbr03009]
 Prokaryotic type
  rRNA helicases
   LVIS_0505
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 AAA_30 CMS1 Helicase_RecD AAA_19 NAGidase CobA_CobO_BtuR
Other DBs
NCBI-ProteinID: ABJ63663
UniProt: Q03T09
Position
539511..541082
AA seq 523 aa
MKFKELGLSEDLLKAITSVGYEEATPIQAETIPMVLAGQDVIGQAQTGTGKTAAFALPIL
EKIDKSNENVQALVVSPTRELAIQTQEEIYKLGRTERANVQVVYGGADIRRQIKSLKNHP
QVVVGTPGRLLDHIRRHTLKLDHVQMLVLDEADEMLNMGFLDDIEDIIKQLPEERQTMLF
SATMPPEIKRVGVQFMKDPKHVKIKAKELTTDLIDQFYVRSRDFEKFDVMTRFFDVQSPD
LTIVFTRTKRRVDEIASGLEARGYNAAGIHGDLTQKRRTQIMNDFRHGKLDILVATDVAA
RGIDINDVTHVYNYDIPQDPDSYVHRVGRTGRAGKHGVSMTFVTPNEMDYLREIEKLTKV
RMLPLKPPSDEEAFVSQLGAAKETIADLVNKADKEKYAKAAESLLNEYDAEDLVAALLSD
VTKDDNNQVPVKITPERPLPKRGGKRHGGGGYHHGGGNRRGGNGGGGYRGGHRSSDRHGN
DRGHGSRNHDSRNHSDNRSHRSNNGGGRRNEGGSRGFTIRKKD
NT seq 1572 nt   +upstreamnt  +downstreamnt
ttgaagtttaaagaactgggtctctctgaagacctacttaaagcaattacgtcagtaggt
tacgaggaagcgaccccaattcaagccgagacaattccgatggttttagccggccaagat
gtgattggtcaggcacaaaccggtaccgggaagactgcggccttcgccttaccaattttg
gaaaaaattgataagagtaacgaaaatgttcaagcgctggttgtctcaccaacacgggaa
ttggctatccaaacccaagaagaaatttacaagttaggccggactgaacgggctaacgtg
caagttgtctatggtggcgctgatattcgtcgtcagattaaatccttaaagaatcacccg
caagtggttgttgggaccccgggtcggttattggatcatattcggcggcacacgttgaag
ttagaccacgtacaaatgttggtcttggacgaagccgatgaaatgttaaacatgggtttc
ttagacgatattgaagatattatcaaacaattgccagaagaacgtcaaacgatgctgttc
tctgcaacgatgccgcctgaaatcaaacgggttggtgtccaattcatgaaggaccctaag
catgtgaagatcaaggctaaggaattaaccacggacttgattgaccaattctacgtgcgt
tctcgtgatttcgaaaaatttgatgtcatgacgcggttctttgacgttcaatcaccagat
ttgacgatcgtctttacccggacaaaacggcgggtagatgaaattgccagtggtttggaa
gcccgcggctataacgctgctgggattcatggggatttgacgcagaagcgccggacccaa
atcatgaacgacttccgtcacggtaagttggatatcttagtggcaaccgatgttgctgcg
cgggggattgatattaacgatgtcacccacgtttataactacgatattccacaagatccc
gatagttatgttcaccgggttggccggactggccgtgccgggaagcatggggtttccatg
acgtttgtgacaccaaacgaaatggactacttgcgtgaaatcgaaaagctgacaaaggtg
cggatgttacctttgaagccaccttcggatgaagaagcgttcgtcagccaattgggtgct
gcgaaggaaaccattgctgacctggtcaacaaggcggataaggaaaagtatgctaaggca
gctgaaagcttgctaaacgaatacgatgccgaagacttagttgcggcgctcttgagtgat
gtcacgaaagatgacaataaccaagtacccgttaagatcacgccagaacgaccattgcct
aagcgcggtggcaaacgtcacggcggtggcggctaccatcatggcggtggcaatcgtcgc
ggcggtaatggcggtggcggttaccgtggtggacaccgttcttcagatcgtcatggtaat
gatcgtggccatggttcacgcaaccatgactcacgtaaccatagtgataaccggagtcac
cgaagcaacaatggcggtggtcggcgtaacgaaggtggtagccgcggcttcaccattcga
aagaaagactag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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