KEGG   Levilactobacillus brevis ATCC 367: LVIS_1633
Entry
LVIS_1633         CDS       T00406                                 
Name
(GenBank) NAD-dependent DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
lbr  Levilactobacillus brevis ATCC 367
Pathway
lbr03030  DNA replication
lbr03410  Base excision repair
lbr03420  Nucleotide excision repair
lbr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LVIS_1633
   03410 Base excision repair
    LVIS_1633
   03420 Nucleotide excision repair
    LVIS_1633
   03430 Mismatch repair
    LVIS_1633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbr03032]
    LVIS_1633
   03400 DNA repair and recombination proteins [BR:lbr03400]
    LVIS_1633
Enzymes [BR:lbr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     LVIS_1633
DNA replication proteins [BR:lbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LVIS_1633
DNA repair and recombination proteins [BR:lbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     LVIS_1633
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LVIS_1633
   MMR (mismatch excision repair)
    DNA ligase
     LVIS_1633
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LVIS_1633
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT zf-NADH-PPase RNA_pol_A_CTD
Other DBs
NCBI-ProteinID: ABJ64709
UniProt: Q03Q13
Position
complement(1597430..1599460)
AA seq 676 aa
MTDKPIKTLTVEQAAEEAADLRPQLLEWGKQYYEADAPSVEDDVYDRVYARLVALETAFP
EIVTPDSPTQRVGGSSRSDLPKVTHDIPMLSLGDVFSLDELTEFDERLRGNVDTPFDYNC
ELKIDGLAISLRYENGKFVQGSTRGNGQIGEDITANLKTIKSIPQTLSRPLTIEVRGECY
MPKAAFLALNERREAAGQAPFANPRNAAAGSLRQLDTRVTADRQLATFMYNVADYEPLTT
RTQSGLLDELAELGFTTNATYRVAHDMADVAAYIETYQAQRTELAYGIDGIVIKANDLPL
QRSLGATVKVPRWAIAYKFPPEEVQTRVLDIEWTIGRTGVVTPTAIMEPVALAGSTVARA
SLHNPDYLIAKDIRIGDTVLLHKAGDIIPEISQYVAAKRPAEAKAYVIPTTCPSCGAELV
HLDDEVALRCINPRCPAQLAEGMNHFASRNAMNIAGLGPQIVAQLFDRNLVQDVADLYRL
TTDQLLTLDKFGEKSAQNLLTAIDNSRNNSLERLLFGLGIRHVGAKAARSLAAAFGDMAS
LMAADSEQISAIDTVGGIIADSVVTYFANTQVHELVAKLQAVGVNMTYTSGTPATNSTSE
FTGKRVVLTGKLQELTRPQATEWLEQHGATVTGSVSKKTDLLIAGEAAGSKLAKAQSLDV
PVWNEAQLQAAMDETK
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgactgataagcccattaagacgctaaccgtggagcaggctgccgaggaggccgctgac
ttacgcccacaattattagagtgggggaagcagtactacgaagcggatgccccatctgtc
gaagacgacgtgtatgatcgcgtgtatgctcgattggtggccttagaaacggcctttcca
gaaattgttacgccagactcaccaacgcagcgagttggcggtagttcgcgaagtgatttg
cctaaggtcactcacgatattccaatgctgtcattaggcgatgttttctcactcgatgaa
ctaacagaatttgatgaacgactacgaggcaacgtggatacaccatttgattataattgt
gaattaaaaatcgatggcttagcgatttcgttgaggtatgagaatggtaagtttgtccaa
ggctcaacccgaggcaacgggcaaattggagaagatattacggctaatctgaagacgatt
aagtctattccccaaacgcttagtcggccactgacaatcgaagtgcgcggtgaatgttat
atgcctaaggccgcctttctggcgttaaatgagcgacgagaggcagcggggcaggcccca
tttgctaatccgcgaaatgcggcggccgggagcctacgccaactcgatacgcgtgtgaca
gctgatcggcaattagccacgtttatgtataacgtggccgactatgagccactgaccacg
cggacgcaaagtggtttgttggatgaattggccgaactcgggtttacgactaatgccact
tatcgagtagcccatgatatggcggacgtggctgcttatatcgaaacgtatcaagcacag
cgaacggaattggcctacggaattgatggtattgtgattaaggcaaatgatttgccctta
cagcgttccctgggagcgaccgtgaaagttccgcggtgggcaattgcgtataaatttccg
ccggaagaagtgcagacccgggtgttagacattgaatggaccattggccgaacgggtgtg
gttacgcccacggccattatggaacccgtggcattagctgggagtacggtggctcgcgca
tcgttgcataatccagattatttgattgctaaggatattcgcatcggggatacggtgttg
ttgcataaagcaggcgacattatcccggaaatttcgcaatatgtggcggcaaagcgtccg
gctgaagcgaaagcctatgttattccgacgacttgcccatcctgtggagctgaattggtt
catttagatgacgaagtggccttacgctgtattaatccccgctgtccagcccagttggcc
gaagggatgaaccactttgcttcccgaaatgcgatgaacattgcgggactgggtccacaa
attgtggcccagctcttcgatcgaaatttggttcaggatgtggctgatttgtatcggcta
acgaccgatcaattattaactttagataaatttggggagaagtcggcccaaaacctcttg
acagccattgataatagtcgcaataattcattagaacgtttgctatttggtttgggcatt
cgccatgtgggagctaaagctgcccgatcattggcagcagcgtttggtgatatggcgagt
ttaatggccgctgacagtgagcagatctccgcgattgatacagtggggggcatcattgct
gatagtgtggtcacctactttgctaatacgcaggtccatgaactggttgctaaactacaa
gccgttggggtcaatatgacttataccagtgggacacccgccaccaattcgacgagtgaa
tttacgggtaagcgggtggttctaacgggaaagttacaagagttgacgcgtccacaagca
actgaatggttagaacaacacggtgcgacagtgaccggcagtgtgtctaagaagactgat
ctgctgattgctggtgaagcggccggtagtaagctagccaaagctcagtcactcgacgtt
cccgtgtggaatgaagcgcaattgcaagcagccatggatgaaacgaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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