KEGG T04754: AYR52

Loigolactobacillus backii: AYR52_04005

Entry

AYR52_04005       CDS       T04754

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

lbt Loigolactobacillus backii

Brite

KEGG Orthology (KO) [BR:lbt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbt03032]
    AYR52_04005
   03400 DNA repair and recombination proteins [BR:lbt03400]
    AYR52_04005
Enzymes [BR:lbt01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AYR52_04005
DNA replication proteins [BR:lbt03032]
Prokaryotic type
  DNA Topoisomerases
   AYR52_04005
DNA repair and recombination proteins [BR:lbt03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AYR52_04005

SSDB

Motif

Pfam:

Topoisom_bac zf-C4_Topoisom Toprim Toprim_4 Toprim_2

Other DBs

NCBI-ProteinID:

ANK59481

UniProt:

A0A192H412

Position

885957..888035

AA seq 692 aa
MAYKNLVIVESPSKAKTIEKYLGRNYKVVASLGHIRDLPKSKMGVDVENDYEPHYISIRG
KGDTIKNLKKYAKKAERVYLASDPDREGEAIAWHVSHILGLDPKDKNRVTFNEITKDTVK
NAFKEPRSIDMDLVDAQQARRIMDRLVGYSISPLLWKKVKKGLSAGRVQSIALKIIIDRE
NEIKAFKPEEYWTIDSQFKKGTYKFDASFYGLNGKKLALSNEDAAKDILQRIKPRANFDI
TKVTKRERKRFPQAPFTTSSLQQEAVRRLNFRTRKTMMVAQQLYEGINLGGRQGSVGLIT
YMRTDSTRVSHIARHEASEFLHANYGEEYAALKIRKTKNPEGAQDAHEAIRPSSVKRTPK
SLEGVLNKDQMKLYKLVWSRFLASQMTPAILDTMAVTIEQNGVTYRANGSKMKFAGFTKV
YDAPGNQDKKDNMLPDLVEGDHVKLVKNDPNQHFTQPPARYSEATLIKTLEENGVGRPST
YAPTIETIQRRYYVRLITKRFEPTELGEIVNKIIVEFFPDIVNIDFTAGLENDLDSIEEG
KTKWIKVVDEFYQPFEKEVTSAESKIEKVQIKDELAGFNCDICGAPMVIKLGRYGKFYAC
SRFPDCRNTKAIVKEIGVVCPTCHKGQVVERKSKKNRIFYGCSRYPECDFVTWDKPVGRD
CPKDGHYLVEKKIKGGKQVICPNGDYEEAVQK

NT seq 2079 nt +upstreamnt +downstreamnt
atggcctataaaaacctcgtgatcgtggaatcaccgtctaaagccaagacgattgaaaag
tatttaggccgtaactataaagtagttgccagcctcggccatattcgtgatttaccaaaa
agtaaaatgggtgtggacgttgaaaatgattacgaaccacactacatctctattcgcggt
aaaggcgataccattaaaaatttaaaaaaatacgctaaaaaagcggagcgcgtctaccta
gcatctgatcctgatcgtgaaggtgaggccattgcctggcacgtttcccatattttaggt
ttagacccaaaggataaaaatcgggtaacttttaacgagattactaaagacaccgtcaaa
aatgcctttaaggaaccccgtagcattgatatggacctagttgacgcccagcaggcacgg
cgaattatggatcgcctagttggctattcaatttcaccgctattgtggaaaaaggttaaa
aaaggcctaagtgccggccgcgtccaatcaattgcactgaaaataattattgatcgagaa
aacgaaattaaggcgtttaagcccgaagaatactggacgattgattcacagttcaaaaaa
ggcacgtataaatttgacgccagtttctacggtttaaacggtaaaaagttagctttaagt
aatgaggatgctgccaaggatatcttacagcggattaaaccgagagctaattttgacatt
accaaagtaactaagcgggagcgcaaacgttttccccaagcaccatttacaaccagttca
ctgcaacaagaagcagttcggcgtttgaatttccggacccggaaaacgatgatggtggct
cagcagctgtatgaaggcattaatttgggtggtcgtcaaggcagtgttggtttaattacc
tatatgcgaactgattccactcgagtttcgcatattgcccgccatgaggccagtgagttt
ttacacgctaactatggtgaagaatacgcggccctgaagattcgtaaaaccaagaatcca
gagggcgcccaagatgcccatgaagcgattcggccttcgtcagttaagcggacaccaaag
agcttagagggcgttttgaataaagatcagatgaagctgtataagttagtctggtcacgt
tttttggccagtcaaatgacaccggctattttagatacgatggccgttaccatcgagcaa
aatggtgtcacctaccgggcaaatggctctaagatgaagtttgctggtttcactaaggtt
tatgatgcacctggtaatcaggataaaaaagataatatgctgcctgatttagttgaaggc
gaccacgttaaattagttaaaaatgatcccaatcagcattttacccagccaccggcacgt
tattctgaagcaaccttgattaaaactttggaagaaaacggtgttggccgaccatcaacc
tacgcaccaacaattgaaacgattcaacggcgttattacgtcaggttgatcaccaaacgt
tttgaaccaactgaattaggtgaaattgttaataagattattgtcgaattcttccccgat
attgttaacattgattttactgctggtttagaaaatgatttggatagcattgaagaaggc
aagacgaagtggattaaggtggtggatgaattttaccaaccatttgaaaaagaggtcact
tccgccgaatctaagattgaaaaagttcaaatcaaggacgaattagcgggctttaactgt
gatatttgtggcgcaccaatggtcatcaaattaggccgttacggtaagttctacgcctgc
agtcgtttccctgattgccgtaataccaaggccatcgtcaaagaaatcggcgttgtttgt
ccgacctgccataagggtcaagttgtcgaacgtaaatcaaagaaaaaccgaattttctat
ggttgcagtcgttatcctgagtgcgattttgtgacttgggataagccagttgggcgtgat
tgtccgaaagacggtcattacttagttgaaaagaaaattaaaggcggcaaacaagttatt
tgtccaaacggtgattatgaagaagccgttcaaaaatag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF

DBGET integrated database retrieval system