KEGG   Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365: LBUL_1407
Entry
LBUL_1407         CDS       T00419                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lbu  Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Pathway
lbu03030  DNA replication
lbu03410  Base excision repair
lbu03420  Nucleotide excision repair
lbu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lbu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LBUL_1407
   03410 Base excision repair
    LBUL_1407
   03420 Nucleotide excision repair
    LBUL_1407
   03440 Homologous recombination
    LBUL_1407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lbu03032]
    LBUL_1407
   03400 DNA repair and recombination proteins [BR:lbu03400]
    LBUL_1407
Enzymes [BR:lbu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LBUL_1407
DNA replication proteins [BR:lbu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LBUL_1407
DNA repair and recombination proteins [BR:lbu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LBUL_1407
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LBUL_1407
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_2 XPG_I DUF6240
Other DBs
NCBI-ProteinID: ABJ58920
Position
complement(1318307..1320967)
AA seq 886 aa
MNKKLLLIDGNSVAFRAFFAMYQQLDKFKNPEGLHTNALYAFKNMLDVVLKQEDPSHILV
AFDAGKTTFRTAMYKDYKGGRDKTPAELSEQLPYLREMLKDMGIKSYELANYEADDIIGT
MAKKGAEAGYEVAVVSGDKDLTQLASDHVTVYVTKSGVTKLEAFTPDHMKEVNGVTPTEF
IDMKALMGDPSDNYPGVAKVGPKTASKLIQEYGSVENLYYHVDEMKKSKLKENLIAGKDN
ALLGKKLATIKCDSPVEVTLDDLSYEGSNVDDLRRFYEKMNFRRFLADLAQKGELTENKT
EVKKQDYVVLSADNLDQLPKAAEVTFYLAMFGDNYHLADFAGFALKIGGETFVSRDVFLL
QESPLKEMLEDSAVQKNVFDLKRTTYGLYRLGIKAEGLSFDLLLASYLVDNEKNSNDLGE
LVQGYDYYDLKTDLEVYGKGKNAKIPADDAVFFNHLAGKTAAIAALKDSLLKQLKDHEQD
DLYDSIELPTARVLAKMEMNGIKVQPSRLKELENDFAVRLKELEEKIYKEAGEEFNLNSP
KQLGVILFEKLGLPVIKKTKTGYSTSVEVLNQLKEQSPVVSDILEYRQISKIQSTYVKGL
LDVIDERDGRIHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPSSPDGYIYS
CDYSQIELRVLAHVSADPNMQEAFKTGYDIHAHTAMKIFHLSSVDEVTSLQRRRAKAVNF
GIVYGISDYGLSKNLDISRKQAKEFINEYFDQYPGIQAYMDWAVKDAREKGYAETIMHRR
RYLPDIHAKNFNVRSFAERTAINSPIQGSAADIMKIAMINMQKKLDELGLKTKMVVQVHD
ELIFDVPADELETIQKIVPSVMQAAVKLDVPLVADASWGHDWYEAK
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgaacaagaagttacttttaatcgatggcaattccgtggccttccgggcttttttcgcc
atgtaccagcagctggacaagtttaagaatccagaaggtctccacaccaacgccctctat
gcctttaagaacatgctggacgtggtcttgaagcaggaagacccaagccatatcctggtg
gcctttgacgctggcaagaccaccttcagaaccgccatgtataaagactacaagggcggc
cgggacaagactccggcagaactttccgaacagctcccttacctgcgggaaatgctcaag
gacatgggaatcaagagctacgaactggccaactatgaagccgacgacatcatcggcacc
atggctaaaaaaggagccgaagccggctatgaagtggccgttgtttccggggacaaggac
ttgacccaattggccagtgaccatgtcaccgtctacgtgaccaagtccggggtaactaaa
ctggaagccttcactccagaccacatgaaagaagtcaacggggtgaccccgactgagttc
atcgacatgaaggctttgatgggtgacccgtccgacaactacccaggcgtggccaaggtc
ggccccaagactgcctctaaattgatccaggaatacggcagcgtggagaacttgtattac
cacgttgatgaaatgaagaagtccaagctgaaggaaaacctgatcgccggcaaggacaat
gcccttttgggtaaaaagctggccaccatcaagtgcgacagcccggtggaagtgaccctt
gatgaccttagctatgagggcagcaatgtcgacgacctccgtcgcttctacgaaaagatg
aacttccgccgctttctggccgacttggcccaaaaaggggagttgactgaaaacaagacg
gaagttaaaaagcaggactatgtcgtgctcagtgctgataacttagaccagctgccaaag
gctgctgaagttactttctacctggccatgtttggcgacaactaccacctggctgacttc
gccggctttgccttgaaaatcggcggggaaactttcgtcagccgggatgtcttcctcttg
caggaaagtcccttaaaagaaatgttggaagattctgccgttcaaaagaacgtctttgac
ttaaaacggaccacttacggcctctaccggctggggattaaggctgaaggcttgtccttt
gacctgctcctggcttcttacctggttgacaatgagaaaaattccaacgacctgggtgaa
ctggtccaaggctacgactactatgacttaaagaccgacctggaagtctacgggaagggg
aagaatgccaagattccggcagatgacgcggtcttcttcaaccacctggctggcaagacc
gcggcgatcgcggctttgaaggacagtcttttaaagcagttaaaagaccatgagcaagat
gacctctacgattcaatcgaactgccaacggccagagtcctggccaagatggagatgaac
gggatcaaggtccagccttcccgcttgaaggaactagaaaacgactttgctgtccgttta
aaggaactggaagagaagatctacaaggaagccggggaagaattcaacctgaattcacca
aagcagctgggggtcatcctctttgaaaagctgggcttgccagtcatcaagaagaccaag
accggttactccacttcagttgaagtcttgaaccaattgaaagaacaaagcccggttgtc
agtgacatcctggaataccggcagatttccaagatccaatcaacctacgttaagggcctc
ttagacgtcatcgatgagcgtgacggccgcatccacacccgctacctgcagactttgacg
gcaactggccgcctgtcttcagttgaccctaacttgcagaacatcccaaccagaacggaa
gaaggtaagcagatcagaaaggcttttgtcccatcaagtccggatggctatatctactcc
tgcgactactcccaaatcgagctccgggtcctggcccatgtctcagccgacccgaacatg
caggaagccttcaagaccggctacgacatccacgcccacacggccatgaagatcttccat
ttaagcagcgttgacgaagtaacgtctttgcaaagacggcgggccaaggcggtcaacttt
gggatcgtctacgggatctctgactacggcctctccaagaacctggacatctcccgcaag
caggccaaggaattcatcaacgaatactttgaccaatacccaggcattcaggcctacatg
gactgggctgttaaagacgccagagaaaagggctacgcggaaaccatcatgcaccgccgc
cgctacctgccagatatccacgctaagaactttaatgtccgctctttcgcggaaagaacg
gcgatcaactccccaatccaagggtcagccgcggacattatgaagattgccatgatcaac
atgcaaaagaagctggatgaactgggattaaagaccaagatggtcgtccaggtccacgac
gaattgatctttgacgtaccagctgatgaactggaaacgatccagaagattgtcccgtca
gtcatgcaggcagctgttaagttggacgtgcctttagtcgctgacgccagctggggccat
gactggtatgaagcaaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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