KEGG   Leishmania braziliensis: LBRM_27_1230
Entry
LBRM_27_1230      CDS       T01113                                 
Name
(RefSeq) putative intraflagellar transport protein IFT88
  KO
K16474  intraflagellar transport protein 88
Organism
lbz  Leishmania braziliensis
Brite
KEGG Orthology (KO) [BR:lbz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lbz03037]
    LBRM_27_1230
Cilium and associated proteins [BR:lbz03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   LBRM_27_1230
SSDB
Motif
Pfam: TPR_16 TPR_2 TPR_19 TPR_1 TPR_12 TPR_6 TPR_7 TPR_14 TPR_8 ANAPC3 TPR_11 TPR_17 TPR_9 TPR-S DUF4919 DUF2989
Other DBs
NCBI-GeneID: 5416743
NCBI-ProteinID: XP_001565882
UniProt: A4HFN8 A0A3P3ZA03
Position
27:complement(469479..471911)
AA seq 810 aa
MNSNDEDIYAAFQTPDIGSNPWTTSTNPFEAPPQEAMSGNPLMQAPPSQWGRAGMGSAWG
VPGSRMGAVGCGLSGAARPMTSNRAVGFRSTNAGGAAVLFDPTGQARMTNMTMGPAPPLK
KRSENSQEEELAEMEKQVNKLIEESAMLALQKDYGAALEKAKDAGKLERSLCKKREQYGF
VEQINVDLTYAVHFNLAVQYQNHQLYTEALNTYNLIIRNVQFPQAGRLRVNMGNIYLAQQ
NYLLAIKMYRKVLDETPTAGKELRYHLCRNIANAFVKLGQYRDAANSYETVVEGNGDVNA
TYNLILCYYALGETEQMKRTFTRLTNCRLTGLDSEEDFEEEEKWKDVLVDDGLSRMRKER
HARYLKYIITAARLIAPVLHKDWCVGYDYIISQLRNYEMRDPTSHVASELEMCKNLNYLK
HKRYQEAINGLKEFEKKDKSLRARAATNLAYLYFLEGDYDSGEQYSDLSLGANQYNAKAL
VNKGNFSFVKKDYDKAKELYNKALAVEADNVEAIYNLGLAAKKLGLYEEAVRTFKRMQAL
VDSNEVLYQIADLSDLVGDPSALEWFNRLIGRVPTDPNALARIGSLYARDGDDVQAFHYY
LEAYRYYQVNMDVISWLGAYFVKNEVYDRAVQFFERASHIQPQEVKWQLMVASCHRRRGD
YVQAKRLYEQLHRKYPDNVECLNYLVQLCKDAGLNEEANEWFKTMKKVERQQIHSSSSSV
GGESGDDEGDSSLEGGSNIHAHRRRTSGTVAPDTAVAGRRAGGGAAADRDFSTGLSDDDI
VDGKAKQNGSKGLKKVKDSDSDDEINLPGI
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgaacagcaacgacgaagatatctacgcggccttccagacgccggatatcgggtcgaac
ccatggacgacgagcacaaacccgtttgaagccccaccgcaggaggctatgagtggcaac
cccctcatgcaggccccgccttcgcagtggggacgggcaggcatgggctccgcctggggt
gtaccgggcagccgcatgggtgcggtgggctgcggtctctccggcgccgcgcgacccatg
acgtccaaccgcgccgtcggtttccgaagcacgaacgccggcggtgctgccgttctcttt
gaccccactggtcaagctcgcatgacaaacatgacgatgggcccagcccctccgctgaag
aagcggagtgagaacagtcaggaagaggagctggctgagatggagaagcaggtgaacaag
ctgatcgaggagagcgccatgctggctctgcagaaggactacggcgcagccctcgagaag
gccaaggatgccggcaagctggagcggtcactatgcaaaaagcgcgagcagtacgggttc
gtcgagcagatcaatgtcgaccttacctacgcagtgcacttcaacttggcggtccagtac
caaaaccatcagctgtacactgaggctctcaacacgtacaacctcatcattcgcaacgtg
cagtttccgcaagctggccgcttgcgggtgaacatgggcaacatctaccttgcgcagcag
aactacctcttagccatcaagatgtaccgcaaggtgctggacgagacgccgaccgcgggc
aaagagctccgctaccacctctgccgcaatatcgccaacgcgtttgtgaagctgggccag
tacagggacgctgcgaacagctatgagacagtggtagagggcaacggcgacgttaatgcc
acgtacaacctcattttgtgctactacgcgctgggagagacggagcagatgaagcggacg
ttcacgcgcctcacaaattgtcgcctcacggggctcgacagcgaggaggactttgaagag
gaggagaagtggaaggacgtcttggtggacgacggtctgagccgcatgcgcaaggagcgc
catgccaggtatctcaagtacatcatcacagcggctcgcttgattgctccagtactgcat
aaggactggtgcgtcggctacgactacatcatctcccagttgcgcaactacgagatgcgc
gacccgacctcgcatgtggcgagtgagctggagatgtgcaaaaacctgaactacctcaag
cacaagcgctatcaggaggcaatcaacggcctgaaagagttcgagaagaaggacaagagc
ctccgagcacgggcggccacgaacctggcgtacctctacttccttgagggtgactacgac
agcggggagcaatacagcgacctcagcctcggcgcgaatcagtacaacgccaaggcactc
gtgaacaaaggtaacttttcctttgtcaagaaggactacgacaaggcgaaggagctgtac
aacaaggccctggcggtagaggctgacaacgtggaggccatctacaacctcggcttggcc
gccaagaagctagggttgtacgaggaggcggtgcgcacgttcaagcgcatgcaggcgctc
gtcgacagcaacgaggtgctctaccagattgctgacctcagcgaccttgtcggcgacccg
tcagcgctggagtggttcaaccgcctcattggtcgtgtgccgacggacccgaacgcgctg
gcccgcatcggctccctctacgcccgcgacggcgacgatgtgcaggcgttccactactac
ctggaggcctaccgctactaccaggtgaacatggacgtcatttcatggctcggcgcgtac
ttcgtgaagaacgaagtctacgatagggcggtacagttcttcgagcgagcctcgcatatt
cagccccaggaggtgaagtggcagctgatggtggcctcttgccaccgccgccgcggtgac
tacgtgcaggcgaagcggctgtacgagcagttgcaccgcaaataccctgacaatgtcgaa
tgcctcaattacttggtgcagctctgcaaggacgctggtctcaacgaggaggccaacgag
tggttcaagacaatgaagaaagtggagcggcagcagatccacagtagcagtagcagtgtc
ggcggtgagagcggcgacgacgaaggcgactcttccctcgagggcgggagcaacatccac
gcccatcgccgccgcacaagtggcacggtcgcgcccgatacggcagtggcgggccgccga
gcaggcggtggtgctgcggccgacagagacttttccactggcctctccgacgacgacatt
gttgatggaaaagccaagcagaatggatcgaagggtttgaagaaggtgaaggacagcgac
tcggacgatgaaatcaacctgcccggcatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (27)   

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