KEGG   Lacticaseibacillus paracasei ATCC 334: LSEI_1054
Entry
LSEI_1054         CDS       T00407                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
lca  Lacticaseibacillus paracasei ATCC 334
Pathway
lca03420  Nucleotide excision repair
lca03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    LSEI_1054
   03430 Mismatch repair
    LSEI_1054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lca03400]
    LSEI_1054
Enzymes [BR:lca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LSEI_1054
DNA repair and recombination proteins [BR:lca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LSEI_1054
   MMR (mismatch excision repair)
    Other MMR factors
     LSEI_1054
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 Viral_helicase1 AAA_30 AAA_11 AAA_12 EVE Terminase_6N ResIII
Other DBs
NCBI-ProteinID: ABJ69848
UniProt: Q03AC4
Position
1035001..1037256
AA seq 751 aa
MVMDAALKGMNDKQSEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKHVNPWNILAI
TFTNKAAREMRERVGKLVDAEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKSILGAISSAKNELVDPQTYANEQANSPFTKVVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDKETLAFYQRKFRYIHVDEYQDTNEAQYQLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKQDYPKAQVILLEQNYRSTKTILSAANDVI
QNNQNRQAKTLWTENREGDKITYYRAQSETDEAIFVIRRIEAEIADNHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPEDDMSFNRIVNEPKR
GIGNTSVEKLEAFANEHDWSLLEAAANAELSPIAGKARGQLAKFGKMIQQLGTRRKDLNV
TKMMQAILEDSGYLSTLRAAHNLEADTRIENLEELLSVTQGFDSRYQPENEDSDIFVDFL
AELALLSDQDDVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRASMDESELEEE
RRLAYVGITRAKQKLYLSNAYGRMLYGQRQNNPASRFIEEINPDLLEVIGTTQPKSDIPF
INRTDRAFSSPYSRHAAQKTATPVTVQAAPTTGAGKTSWEAGDKVKHRKWGTGTVVKVTG
TGDDQELDIAFKDNGIKRLLAAFAPIVKVAS
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggtaatggatgccgcattaaagggtatgaatgataagcaatctgaggcggtgttggcg
actgaagggccagtgctgattatggctggtgccggttcaggcaagacacgggtattgact
catcggattgcttatttagttgaagaaaagcacgtcaatccatggaacatccttgccatc
acgtttacaaataaggccgcccgtgagatgcgcgagcgagtcggcaagttggttgatgct
gagattgcgcgcgatatttgggtctcaacgttccatgcgctctgtgtccgaattttacga
cgcgacattgacaagctgggctataaccgtgcctttacgattgctgatcctgctgagcaa
ctgacgctagtgaagcatattttggctgatttcaatcttgatccaaagcgctacgatcct
aaatccattttaggtgctatttcgagcgctaaaaatgaactcgtggatccacaaacttat
gccaatgaacaggctaacagtcctttcaccaaagttgtggcgcaggtttatgcggaatat
caaaagcgtctgcgcagtgatcaggcattggactttgatgatctcatcatgcagaccatc
gtgctttttgaaaaagacaaagaaacattggcattctaccagcgtaagttccgctacatt
catgttgacgaatatcaggacactaacgaagcgcaataccagctcgtgcatatgttggca
gaaggctaccataatttatgtgtggttggtgatgccgaccagagcatttatggctggcgt
ggtgccaatatgcagaatattttggatttcaaacaagactatccaaaggcgcaagtcatt
ttgcttgagcagaattatcggtcaactaaaactattttgagtgcggccaatgatgtgatt
cagaacaatcagaatcgccaagccaaaacgttatggacggaaaatcgcgaaggcgacaag
attacctattaccgcgctcaaagcgaaactgatgaagctatttttgtcattcgccgaatt
gaagcagagatcgctgataatcatcgcaaatatggtgattttgcgattttgtaccgaacc
aatgcgcagtcgcgggcgattgaagaagcgtttgtgaagtccaatattccatataaaatg
gttggcgggcataagttctatgatcgcaaggaaattcgcgatgcgctagcgtatttccga
ttagtggtcaatccggaagacgatatgagttttaatcgaattgtcaatgaaccaaaacgc
ggtattggcaacacaagcgttgagaagttagaggcctttgccaatgagcatgactggtcc
ttgctggaagcagcggcgaatgctgaactcagtccgattgctggtaaagctcgcggacag
ttagctaagttcggtaaaatgatccagcagctgggtacacggcgaaaagatctaaacgtg
accaagatgatgcaggcaattcttgaggatagtggctatttatcaacactgcgagcggct
cacaatctggaagccgatacccgcatcgaaaacttagaagaattgctttcggtgacccaa
ggattcgattcccggtatcagccggaaaatgaagacagcgacattttcgttgattttctg
gctgaactggcgctgttatcggatcaggatgacgttgaagaagatgcacaagaagttacc
ttgatgaccttgcacgctgctaaaggactggaatttccggttgtctttttagtggggatg
gaagaaggactctttccattaagtcgggcttccatggatgaaagcgagctcgaagaggaa
cggcgcttagcttatgtcggcattacccgcgccaaacagaagctgtatctgtccaatgcc
tatggccggatgctgtatggtcaacggcaaaacaatcctgctagccgtttcattgaagaa
attaatcctgacttgttggaagtcattggcactacccagccaaaaagtgacattccattt
attaatcgtactgatcgcgcattcagctcgccgtatagccgccacgctgctcaaaaaaca
gcaacacccgttactgtgcaagccgcgccaacaacaggtgcaggcaaaaccagttgggaa
gctggcgacaaggtgaagcatcgcaagtgggggactggtaccgtggtgaaagtcacgggt
accggcgatgatcaagaactcgatattgcttttaaagacaacggcatcaaacgactgcta
gctgcctttgctccaattgtcaaagtggcatcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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