KEGG   Lacticaseibacillus paracasei ATCC 334: LSEI_2903
Entry
LSEI_2903         CDS       T00407                                 
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification FAD-utilizing enzyme
  KO
K03495  tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
lca  Lacticaseibacillus paracasei ATCC 334
Brite
KEGG Orthology (KO) [BR:lca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lca03016]
    LSEI_2903
   03036 Chromosome and associated proteins [BR:lca03036]
    LSEI_2903
Transfer RNA biogenesis [BR:lca03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LSEI_2903
 Prokaryotic type
    LSEI_2903
Chromosome and associated proteins [BR:lca03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LSEI_2903
SSDB
Motif
Pfam: GIDA GIDA_C_1st GIDA_C FAD_oxidored FAD_binding_2 Pyr_redox_2 AlaDh_PNT_C Pyr_redox DAO ThiF HI0933_like Pyr_redox_3
Other DBs
NCBI-ProteinID: ABJ71611
UniProt: Q033L1
Position
complement(2888105..2890006)
AA seq 633 aa
MPDVKKFEAGTYDVIVVGAGHAGCEAALAAARMGQKTLLLTISLEMLAFMPCNPSLGGPA
KGIVVREIDALGGEMGKNIDRTYIQMRMLNTGKGPAVRALRAQADKAAYHRSMKHVIENT
PNLDLRQGLATEVLVENGQAVGIVAATGAMYRAKSVVLTAGTSSRGKIIIGELMYSSGPN
NSLPSIKLSENLEQLGFKLRRFKTGTPPRVNGNTIDFDKTEEQPGDKTPNHFSFTTPDSV
YLKDQLSCWMTYTNATTHQIIRDNLDRAPMFSGVIKGVGPRYCPSIEDKIVRFADKPRHQ
LFLEPEGRDTSEYYVGDFSTSMPEEIQLKMLHSVAGLEHAELMRAGYAIEYDVIEPWQLK
ATLETKVVDNLFTAGQMNGTSGYEEAAGQGIMAGINAALRAQGKGPFTLKRSDAYIGVMI
DDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLKPMGHELGLISDERYAEFLAKRQAIE
TELNRLNTTRLKPKDVNPWLEAHHYAPLKDGVLASDFLKRPEIDYQTMAQFLPDNPTLDH
RVIEQVEIQIKYAGYIAKEEASVAKLKRLEGKKIPLRINYAAINGLATEARQKLVKIQPE
TIAQASRISGVNPADVAILSVYIEQGRISKVAQ
NT seq 1902 nt   +upstreamnt  +downstreamnt
atgcctgatgtcaaaaaatttgaagccggtacctatgatgtcatcgttgttggtgctggt
cacgctggttgtgaggccgctttggcagccgcgcggatgggccaaaagacgttactattg
acgatcagcttggaaatgctggcgtttatgccgtgtaatccaagtctgggcggcccagcc
aagggaatcgtagtgcgtgaaattgatgcactcggtggtgaaatgggcaagaatattgat
cgaacatatattcagatgcggatgcttaacaccggcaagggcccagccgttcgtgcatta
cgggcccaggctgataaggcagcctatcaccgcagcatgaaacacgtgattgaaaacacg
ccaaatctggatctgcgtcaaggcctcgctactgaggtgctcgtcgaaaatggccaagct
gtcggtatcgtggcggcaactggcgcaatgtatcgggccaagagtgttgttttgaccgca
ggcaccagttctcgcggcaagattatcatcggtgagttgatgtacagttctggccctaat
aacagcctgccaagtatcaagctgtcagaaaatcttgaacagctcggcttcaaattgcgg
cgatttaaaaccgggactccgccgcgagtcaatggcaacaccatcgactttgataaaacc
gaggaacagcctggcgataagactccgaatcattttagcttcacgacgccggattcagtt
tatttgaaggatcagcttagttgctggatgacttacactaatgcaacgacccatcaaatt
attcgcgataatttggatcgggcgccaatgttttccggtgtgatcaaaggggttggcccg
cgctattgcccatcaattgaggataagatcgttcgttttgctgacaagccgcggcatcaa
ctgtttttagagccagaaggtcgcgatacctccgaatactatgtcggtgatttttcgact
tctatgccagaagaaattcaactgaaaatgctgcatagtgtggctgggttggaacatgcc
gaactcatgcgtgccgggtatgcaattgagtacgatgtgatcgagccatggcaactgaag
gccacgttagaaaccaaagtcgttgataatcttttcactgccggccagatgaatggtacc
agcggctatgaagaagcagctggccaaggcattatggctggcatcaatgcggcgttgcgt
gcccaaggcaaagggccgttcacgctcaagcgttccgatgcctatattggtgtgatgatt
gatgatttggtgactaagggcacgaatgaaccttatcgcctgttgaccagccgtgctgaa
tatcgacttttgttgcgccatgacaatgccgatctgcggctgaaaccaatgggccatgag
cttggtttaattagcgatgagcgctatgctgaatttttggcaaagcgtcaggccattgaa
actgaacttaaccggctgaatacgacccggttgaagcctaaagacgtgaatccatggcta
gaggcccatcattatgcgccacttaaggatggcgtcttggctagcgacttcctgaagcgg
ccggaaatcgactatcagacgatggcgcaattcttgccagataatccgactttggatcat
cgtgtcattgagcaggttgagattcaaattaagtatgctggctatattgcaaaggaagaa
gccagtgtcgccaaactgaagcgcctagaaggcaaaaagattccgctacgtattaactac
gcggccatcaatggtttggcaactgaagcacgtcagaagttggttaaaatccagccagaa
accattgcgcaggcgagtcgtatcagcggcgtcaatcctgctgatgtggcgattttgtca
gtgtacattgagcagggacgcattagtaaagtggcccaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

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