KEGG T00723: LCABL

Lacticaseibacillus paracasei BL23: LCABL_00050

Entry

LCABL_00050       CDS       T00723

Symbol

gyrB

Name

(GenBank) DNA gyrase, B subunit

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

lcb Lacticaseibacillus paracasei BL23

Brite

KEGG Orthology (KO) [BR:lcb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcb03032]
    LCABL_00050 (gyrB)
   03400 DNA repair and recombination proteins [BR:lcb03400]
    LCABL_00050 (gyrB)
Enzymes [BR:lcb01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LCABL_00050 (gyrB)
DNA replication proteins [BR:lcb03032]
Prokaryotic type
  DNA Topoisomerases
   LCABL_00050 (gyrB)
DNA repair and recombination proteins [BR:lcb03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      LCABL_00050 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

CAQ65137

Position

5048..7009

AA seq 653 aa
MTDKKETAEEKKDELAAEYDASQIQVLSGLEAVRKRPGMYIGSTSSQGLHHLVWEIIDNG
IDEALAGFATRIEVEVNPDNSVTVTDDGRGIPVDIQSKTGRPALETVYTVLHAGGKFGGG
GYKVSGGLHGVGASVVNALSTDLDVTVTRGGKRYYIDFIRGKVNTPMKVIGTAPEHEHGT
KVHFLPDPDIFTEIRTFDDKILTTRIRELAFLNKGLKLTFTDKRAATHEKLVFHYEGGLK
SYVDFLTEKKENLLQEPIYVEGQDKGITVEVALQYTNDYHSTLLTFANNIHTYEGGTHET
GFKTALTRVINDYARRSGALKDSDDPLSGDDVREGLTAVVSVKHPDPQFEGQTKTKLGNS
DARTVVDRTFSDHFNKFLMEHPADGKLIIDKAMLASKARLAAKRAREVTRKKSGLEISNL
PGKLADNTSKDPEISELFIVEGDSAGGSAKSGRSRLTQAILPIRGKILNVEKASMERILA
NEEIRTLFTAMGTGFGQDFDINKARYHKLIIMTDADVDGAHIRTLLLTLIYRYMRPVLDA
GYVYIAQPPLYRLRQGKMTQYIDSDEELQDILGQLPPSPKPEIQRYKGLGEMDANQLWET
TMDPDNRRLLRVSPKDAEAADGVFEMLMGDHVEPRRKFIEDNAVFVDPNNIDA

NT seq 1962 nt +upstreamnt +downstreamnt
gtgacggacaagaaagaaacggccgaagagaagaaggatgaactggcggctgagtatgat
gccagccagattcaagtactttcaggacttgaagcggttcggaagcgtccagggatgtat
attggctcgacaagcagccaaggcttgcatcatttggtctgggaaatcattgataacggg
attgatgaagcgctggctgggttcgcaacgcggattgaagttgaagttaacccagataat
agtgtgacggtaacagatgacggtcgcgggattccagtcgatatccagtctaaaaccgga
cggccagcacttgaaacggtttataccgttttacatgccggtggtaaattcggcggcggc
ggctacaaagtttccggtggcctacatggtgtcggggcatcagtcgtgaatgcgttgtcg
actgatttggacgtcacggttactcgtggtggcaaacgttactacattgactttattcgc
ggcaaggtgaacacgccgatgaaagtgattggcacggcaccggagcacgaacatggcacc
aaggttcattttctgcctgatccggacatttttaccgagattagaacattcgatgataag
atcctgaccaccagaattcgcgaactggctttcttgaacaagggtctcaagttgaccttt
accgacaagcgcgcggcaacgcacgagaagctggtgttccattacgaaggcggcctcaag
tcttacgttgactttttaactgagaaaaaagaaaacctgttacaagaaccgatttatgtg
gaaggacaagacaaaggcatcacggtggaagtcgcgttgcaatacaccaacgactatcac
agcaccttgttgacgtttgccaacaacatccatacgtatgaaggcggcacgcatgagacc
gggttcaaaacggcgctgacacgggtcattaatgattacgctcgccggtctggtgcgcta
aaagacagcgatgatccgttaagcggggatgatgttcgtgagggcttgacggcggttgtt
tccgtgaagcatccagatccgcagtttgaagggcaaactaaaaccaaattagggaactcg
gatgcccgaacggtggttgaccgtaccttctctgaccacttcaataagtttctcatggaa
cacccagctgatggcaagctaatcattgacaaagctatgctggccagcaaggcacgtttg
gcggctaagcgggcgcgtgaagtgacccggaaaaagagcgggttggaaatttcgaacctg
cctggtaaattggccgacaacaccagtaaggacccagagatctctgaattatttatcgtc
gaaggggattccgctggtggttctgccaaatcagggcgtagtcgcctgacgcaggccatt
ttgccaattcgtgggaaaattctgaatgtcgaaaaggcttcaatggaacgcatcttggcc
aatgaagaaattcgaaccttatttactgcgatgggtaccggttttgggcaggactttgat
atcaataaggctcgatatcacaaactgatcattatgaccgatgccgatgttgatggtgcc
cacattcggactttgttgctgacgttgatttatcgctacatgcggccagtgcttgacgct
ggctatgtctacatcgcacagccgccgttgtatcggttacgccaaggcaaaatgacgcaa
tatattgattccgatgaagaattgcaagacattctaggccagttgccgccgagtccaaag
ccagagattcagcgttacaaagggcttggggaaatggacgccaaccagctatgggagacg
accatggatccggataatcggcgcttactgcgggtatcgccaaaggatgccgaagctgca
gatggcgtttttgaaatgttgatgggtgatcatgttgaaccgcggcgtaaatttattgaa
gataacgctgtgtttgttgatccgaacaacattgatgcttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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