KEGG   Lacticaseibacillus paracasei LC2W: LC2W_1784
Entry
LC2W_1784         CDS       T01956                                 
Symbol
appD
Name
(GenBank) ABC transporter, ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
lce  Lacticaseibacillus paracasei LC2W
Pathway
lce02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lce00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LC2W_1784 (appD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lce02000]
    LC2W_1784 (appD)
Transporters [BR:lce02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    LC2W_1784 (appD)
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N AAA_22 AAA_29 nSTAND3 RsgA_GTPase NB-ARC AAA_16 nSTAND1 DUF87 AAA_23 NACHT MobB Sigma54_activat GTP_EFTU_D2 AAA_33 AAA_25 NTPase_1 AAA_15
Other DBs
NCBI-ProteinID: AEA54116
UniProt: K6QPF8
Position
complement(1733404..1734426)
AA seq 340 aa
MDKPEDLLLDVQHLHTGFRLGDDYYDAVDDVSITLRKDEILAIVGESGSGKSTLATSIIG
LHDPRNTKVTGDILYNNLNLVGLNEALFDRIRGKDIGMIFQDPLAALNPLMRIGEQIEET
LVYHTKMNKEERESRVLELLNQVGIPNPERTARSYPHELSGGMRQRIVIAIAIACKPPII
IADEPTTALDVTIQAQILDLLEDIQREMHSGIILITHDLGVVAETADRVAVMYAGQIVES
GSVMDVFKHPTHPYTRSLLRSMPQTDSDDDELHVIQGVVPSLKNMQIEGCRFAARIPWIP
ASAHEEHPIMHEVGPDHFVQCTCYKDFYFPDDEQAAEKGE
NT seq 1023 nt   +upstreamnt  +downstreamnt
ttggataaacctgaagatttgctgctggatgtgcaacatctgcacacgggattcagactc
ggagacgactattatgatgcggtcgatgatgtcagcatcacgttacgaaaagatgagatc
ttagctattgttggcgaatcgggttctggtaaaagtactttggcaaccagtattatcggc
cttcatgatccgcgcaatacgaaggtcactggcgatattttgtacaacaatcttaatctt
gttggcttgaatgaggccctttttgaccgaattcgtggcaaagatattggcatgatcttt
caagatccattggctgctttgaacccattgatgcggattggtgagcagattgaagaaaca
ctggtctatcacactaagatgaacaaagaagagcgtgaaagtcgcgtcttggaattactg
aaccaagttggtattcccaaccctgagcgaacggcacgttcatatccgcacgaattgtca
ggcggtatgcggcagcggattgtgattgccattgcgattgcctgcaaaccaccgattatc
atcgctgacgaaccaacaactgctttggatgtgacgattcaggcccaaatcctggatctg
ttggaagacatccaacgggaaatgcattctggcattattttaattacgcatgatcttggt
gttgttgctgaaacggccgatcgtgtggcagttatgtatgcgggccaaattgttgaaagt
ggttcggtaatggatgttttcaagcatccaacgcacccatacacgcgcagtttacttcgc
tccatgccacagacagattcagatgacgacgaattacatgtcattcaaggcgttgtgcca
tcattgaagaatatgcagatagaaggttgtcggtttgcggctcggattccttggattcct
gcatcagcccatgaagagcatccgatcatgcacgaagttggccctgatcactttgttcag
tgtacctgctacaaggacttctatttcccggatgacgaacaagcagctgaaaaaggtgag
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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