KEGG   Lates calcarifer (barramundi perch): 108873537
Entry
108873537         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase gamma-like
  KO
K16667  receptor-type tyrosine-protein phosphatase gamma [EC:3.1.3.48]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108873537
Enzymes [BR:lcf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     108873537
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    108873537
SSDB
Motif
Pfam: Y_phosphatase Carb_anhydrase fn3 DSPc Y_phosphatase3 PTPlike_phytase
Other DBs
NCBI-GeneID: 108873537
NCBI-ProteinID: XP_050930729
Position
LG12:8524684..8933472
AA seq 1428 aa
MWRLLQSCFRCWWIFSLILPAYVLLWADCHPAALTGSQARSQTLTHGLRRATSGGTRLRR
AATEETYWAYSGIYGPDEGWASAYPECKERNQSPINIVDQDTKVSTEYQELTLEGFDVES
SNKTSMKNTGKTVAIMLKDDYFVRGAGLPGRFKAEKVEFHWGPSNGSEGSEHSINGRRYP
VEMQIYMYNSDDFDSLSAALREKRIIAAMAVFFQVGGKDNPAVDPIIHGLKGVVHHEKET
FLEPFVLKDLLPSSLGSYYRYTGSLTTPPCSKVVEWIIFSRPIYVSYKQLEAFYSIFTTE
QQDHVKSVEYLRSNFRPIQSLDNRHVFKSAVKDAWIPDLTDSASGPYGTEASKVCSSAPI
NMKVQHVNGSALVVRWARPEVTYHPPILHFLVSYSWTAHDDSYEETHLTDAKHKLEAVIS
PVSPDVLYLFRVQAVCMNDMRSDFSQSMLFRANTTRIFEGTRIVKTGMPTVSPASSADMA
PISSGSSTWTSSGIPFSFVSMATGIGPSSSGSQATVASVVTSTLLAGLGFSGGVISSFPS
SVWPSRAPTHNPTSTHQTTEPSKDAXASAVTTAAAKDNSEAGGEDRDSCKGQGEDGEREG
EDKDEEEEEDEKDEKKEKKGSGHVGKAGLKDRSAAMSKPPSETPDSSAKGKKQTEPDPPK
MTHGVEDQLEVYTHSPHDSNPTTTSEAANEIATFPAPSDSAATLRPSAGRDKKHWPFSIH
TVRPSAVTNLTGQARPGSGAGLGRVEWLAPLAVVSTLTFLCLVLLLAVLVYWRRCFQTAH
FYVEDSDSPRVVPNETIPIIPIPDDMDAIPVKHFIKHISELYSNNQHGFSEDFEEVQRCT
ADMKITSEHSNHPDNKHKNRYINIVAYDHSRVKLRLLAGKDSKHTDYINANYVDGYNKPK
AYIAAQGPLKSTFEDFWRMVWEQNTGVIVMITNLVEKGRRKCDQYWPTENSEEYGNMVVT
LKSTKVHACYTVRCFTLRNTKVKKGGKGNPKARAQNERTVLQYHYTQWPDMGVPEYTLPV
LTFVRRSSAAQMPDMGPMLVHCSAGVGRTGTYIVIDSMLKQIKDKSTVNVLGFLKHIRTQ
RNYLVQTEEQYIFIHNALMEAILGKETEVAASQLHSYFTSITTPGHSGQTHLDKQFKLVT
QCNVRFTECFNAQKECNKEKNRNSSVVPSERARVSLAPLPGIKGTDYINASYIMGYYRSN
EFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPANHGLAEDEFVYWPSQEEAMNCEAFTVT
LISKDRLCLSNEEQISIHDFILEATQDDYVLEVRHFQCPKWPNPEAPISSTFELINIIKE
EAATRDGPTIVHDELGAVSAGMLCALTTLSQQLESEGAVDIYQVAKMINLMRPGVFTDID
QYQYLYKALLSLVSTKENSLGLLARNINGTMVSMSDQSDQAESLESLV
NT seq 4287 nt   +upstreamnt  +downstreamnt
atgtggaggctactgcaatcatgttttcgctgctggtggattttctctctcattttgcca
gcctacgtgctcctgtgggccgactgtcatcctgcagcactaacgggaagccaagccagg
tctcaaacccttacccatggccttcgcagagccacatctggtgggacacgactccggaga
gctgccaccgaggagacctactgggcctactcaggtatatatgggccagacgagggctgg
gcgtcggcctaccctgaatgcaaagagagaaaccagtcaccaataaatattgtggaccag
gataccaaagtatccacggagtatcaggaactgacactggaaggctttgatgtggaatct
tctaataagacatctatgaagaacaccggcaaaacagtggccattatgttgaaggatgat
tactttgttcggggagcaggcctaccagggagatttaaggcagaaaaagttgagtttcat
tggggtccaagcaacggatccgaggggtctgaacatagcatcaacggccgacgttaccct
gtggagatgcagatctacatgtacaactcagatgacttcgacagcctcagcgcagcgctc
agggagaagaggatcatcgcagccatggctgtgttttttcaggtgggagggaaggacaat
cctgctgtcgaccctataatccatggcctgaagggtgtggtccatcatgaaaaagagact
ttcctggagccatttgtactgaaggacctgctgccatcctctctgggaagttattatcgc
tacaccggctctctgacaactccgccctgcagtaaggtggtagagtggatcatcttcagt
aggcctatctacgtctcatacaaacagttggaggctttctactcaatttttaccacagag
cagcaggaccatgtgaagtcagtggagtatctgcgcagcaacttcaggcccatccaaagc
ttggataatcgccatgtcttcaagtcagcagtcaaagatgcctggatacccgacctgact
gacagtgccagtggaccatatggcacagaggcttccaaagtgtgcagcagtgctcctatc
aacatgaaggtgcagcatgtgaacggcagcgctctggtggtccgctgggcccgtccagag
gtcacttaccatccacccatcctccacttcctggtgtcctacagctggacagcccacgac
gacagctatgaggagacacatctcaccgacgccaaacataaactggaggctgttatatct
cctgtctcccctgatgtactgtacctgtttcgagtccaggccgtctgcatgaatgacatg
cgcagtgacttcagccagagcatgctcttcagagcaaataccaccaggatatttgaggga
acgaggattgtgaaaactggaatgccaacagtctctccagcctcctcagccgacatggct
cccatttcctctggctcatctacctggacttcttcaggcatccccttctccttcgtctcc
atggcgacaggcattggcccgtcctccagtggtagtcaggcaacagtggcatccgtggtg
accagcaccttactggctgggctgggcttcagcggcggtgtcatctcctccttccccagc
tctgtttggccaagcagagcaccgacccataatcccacctctacacaccagaccaccgag
ccctccaaagatgcanccgcctccgctgtcacaacagctgcagccaaagataacagtgaa
gctgggggtgaggacagggacagctgcaagggtcaaggagaggatggagagagggaggga
gaggataaggatgaagaggaggaagaagacgagaaagatgagaagaaggagaagaaagga
tcaggacatgtgggcaaagcagggttgaaagacaggagtgcagccatgagtaagccgccc
agtgagacacctgactcctctgcaaaggggaaaaaacagactgaaccagatccacctaaa
atgacacatggtgtagaagaccaactggaggtgtatacccacagtccacatgactctaat
cccactaccacctcagaggcagccaatgaaatagcaacattccctgctcccagtgactct
gcagcgacactcagacccagcgcagggagagacaagaagcactggcctttctcaatccac
actgtccgtccgagtgcagtgaccaatctaaccggccaagcaaggcctgggtctggggca
ggactgggccgtgtggagtggctggcacctttggcggtagtctcaactctaaccttcctc
tgcctcgtcctcttgctggctgttctagtctactggaggcgctgtttccagacagctcat
ttctatgtggaagacagtgattcacccagggtggtgcccaatgagacgatccctatcatc
cccatcccagatgacatggacgccattccagtcaagcacttcatcaaacacatctctgaa
ctctactcaaataaccaacatggattctctgaagattttgaggaggttcaacggtgcact
gctgatatgaagatcacgtcagagcactccaaccaccctgacaacaagcacaagaacaga
tacatcaacatagtggcctatgaccacagcagggtgaagctaaggctgctggctgggaag
gactccaaacacaccgactacatcaatgccaactatgtggatggttacaataagcctaaa
gcctacattgcagcccagggacctctcaagtccacctttgaggacttttggcggatggtg
tgggagcaaaatactggtgtcattgtcatgatcaccaacttagtggagaaagggcggaga
aaatgtgaccagtactggccgacagagaacagtgaagagtatggcaacatggtagtcaca
ctgaaaagcaccaaagttcatgcctgctacactgtccgctgtttcacactgcgcaacact
aaagtgaaaaagggtgggaaggggaaccctaaggcacgggcccagaatgaacggacagtg
ctccagtatcattacacccagtggccagacatgggtgtcccagagtacaccctgcccgtt
ctcacctttgtccgtaggtcctcagccgcccagatgcctgatatgggaccgatgcttgtt
cactgcagtgccggagtgggtcgcacagggacgtacatcgtcattgacagcatgctgaag
cagatcaaagacaagagcacagttaatgtactcggcttcctcaaacatatacgcacccag
cgcaactacctagtccagacagaggagcagtacatcttcatccacaatgccttgatggaa
gctattttggggaaggagacagaagtggcagccagccagcttcatagctacttcaccagc
atcacaacaccaggacacagtggccagacacatctggacaaacagttcaagctggtaaca
cagtgcaatgtcagattcacggaatgcttcaacgctcagaaggagtgcaacaaagagaaa
aatcgaaattcctccgtggtgccatcggagcgagcgagggtcagcctagcaccattgcct
ggcatcaaaggcaccgattacattaatgcctcttacatcatgggttactaccggagtaat
gaattcataattacccagcatcctctgccccataccacaaaagacttttggagaatgatc
tgggaccacaatgcacaaattattgtcatgctgcctgccaaccatggactggcagaggat
gagtttgtgtactggcccagtcaggaggaggccatgaactgcgaggctttcactgtcacc
ctcatcagtaaagaccggctctgtctgtccaacgaggaacagatcagcatccatgacttc
atcctcgaagctacacaggatgactatgtattagaggttcgtcacttccagtgtcccaag
tggccaaaccctgaggcacccatcagcagcacctttgagctcatcaacatcattaaagag
gaggcagccacccgtgatggaccaaccatcgtccacgatgagttgggagcagtgtcagct
ggcatgttgtgtgccctcaccaccctgtctcagcagctggagagcgaaggcgccgtcgat
atctatcaagtggccaagatgatcaacctcatgaggccaggagtcttcacagacattgac
cagtaccagtacctatacaaagccctgcttagcctcgtcagcaccaaggagaacagcttg
ggacttctggccaggaacattaacgggaccatggtgtccatgtccgaccagtctgaccag
gcagagagcttggagtcgttggtgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (41)   

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