KEGG   Lates calcarifer (barramundi perch): 108873760
Entry
108873760         CDS       T04895                                 
Symbol
brwd1
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108873760 (brwd1)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     108873760 (brwd1)
SSDB
Motif
Pfam: WD40 Bromodomain NBCH_WD40
Other DBs
NCBI-GeneID: 108873760
NCBI-ProteinID: XP_018517571
UniProt: A0A4W6D148
Position
LG21:complement(5574627..5596185)
AA seq 2272 aa
MAKNRNTSLLESELYYLISRFLTTGPCRRAAEVLASELEEYQLLPRRLDWLGNEHPRTYE
DVVAANRHIAPDHLLQICKQIGPLLDKEVPSCVPGVHSLLGSGKQSMLRTPKDCDSVWFK
ASSYAALHRGRPPERPLNCKNPPPLVKVHRGRELTGVHRFSSINPVSNYEHMRLHRRILG
HLSAVYCIAFDRTGLRIFTGSDDCLVKIWSSFDGRLHSTLRGHSAEITDLAVNYENTLIA
AGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFAKGSKRYMLSTGTDATVCFWQWD
VNNINFSDRPHKFTERPRPGVQTVCSSFSPGGIFLATGSTDDVIRIYYLGSGSPEKISEL
HEHTDKVDSIQFCHSGERFVSGSRDGTARIWKLHQRQQWRCILLNMSATLPGAEALSEEE
SYFKPKVTMVAWDRHDNTVITAVNNHLLKVWNSYTGQLLHILKGHEAEVFVLEPHPFDPR
IILSAGHDGNVFIWDLLRGTNTQHYFNMIEGQGHGAVFDCKFTPDGQRFACTDSHGHLLI
FGFGSSKPYEKLPDQVFFHTDYRPLIRDANGFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RYQRLVPGRENIAAEHLVPQLGYVATSDGEVVEQVISQQTAEHEEVTVRRSSLLDEAIRQ
LQEQQDRQNQPGTESAPGAGVGPEGQAEAQGPALAPAPSTPRRVSVNDRADVQSPPNVGL
RRSGQVEGVRQMHQNAPRSQMATERDLQAWRRRVVVPELAPSSYRDQEDIRTAKGDEEVA
LYNAKKRRIIYSSCRDDSDDEPPTSKRGHSRGDTMDFIDLSCEEGEETASSEVHTEDNEL
DGSELESSNDEEEWNSDSSSHTSSEYSDWTADAGINLQPSTPLSSRKRVRRRLSTSEEEE
EENEEEEEKQQQSDEDEKPGKKSKEKAKKAKNKSPRRPKARPSINREVSNEFRPSPWITD
VIPRKSPFVPQMGDEVIYFRQGHEAYVEAVSRNELYPINLDKQPWKKMELRDQEFVKITG
IKYEVCPPTLCCLKLTLIDHGTGKITDKSFSVKYHDMPDVIDFLVLRQSYDEALRRNWQP
NDRFRSVIDDAWWFGTIVCQEPYQPEYPDSLFQCFKVRWDNGETEKLSPWDVEPIPDDAQ
QPETEGGGIPVTADEMSELMYKPLPGEWGERSRDEECERIIAGIDQLITVEIAAPFSGPV
DLVQYPTYCTVIAYPTDLGTIRLRLMHRFYRRLSALIWDARYIAHNARTFNEPRSKIAHS
AKIITNVLQKFVNNPSCTDIMEIYNAVEEMDDDEEDEDTEAPGTSAGHRLRQRSVEVVPD
RDAWKEQCKNLLNYIFQCEDSEPFRQPVDPQNYPDYHDIIDTPMDFGTVKRTLEEDHYEN
PIELCKDTRLIFANAKAYTPNKRSKIYSMTLRLSAFFEDKIRTIISEYKTAVKSSDRLRR
SQRFRKKMQQQDQPTATTSQKRAAVKTQEKVESTSVTKSTSAKVSVPERARRSRSSSSGH
SSSEDDSVSKAASSTPESDSESEPSESEEEKRPGSSRHHQRRQKARVTRGNCGKQRKKVA
ESDSEEEEEEEEEEEEEEEEFDSEGEEGEDGEVSSQSSGRRYPSRSKNSRSTRLTRNSAA
ADRKRTEGRAEMNGHSSRSSRRERRHHQDSDRATSQGSDREEEEVTGRRSLKRKTARAAV
NKIKLLEASDEDYEEEEKPTRSSSRLRHTARASKRTAVIQSSSDSDGGPSTRGSRNMKES
GRESKDEGDGNDSDASSSSQNQQNGDTRSNKQRTSRQAAKTKGNDTLSHVNGHSEKHHKS
DSNSEQEETAEESSGEAEEEEEEEEEEQVAVSRKPSRSTATTPARKKRITSEEEEEEVED
TERRVTRHKPPVSSDEEDKDHSSQKHPHQNGRNVEEVIHKDSKKKSKVSPSKSQDKQKSA
SANKLDGAESDELSDSPKRSSPRKTRLKKDKEREEESNHSSEEIEVETKTRRSARNKSKS
KRPHGGTSASESSEQEYKPKRKSRRKRSTGSSDEESDNSDNTSNRRLSLRALPKKKYISD
NSFSEEDSASVSQGKQRNGNKTATASREDKYNKRESNRTSPSETRNQLSSKRKRIYTSDS
EDGEEEREEPVSKNNKNGRSGSSKRPKRESKQGDDNSNEEDTSSQSDSSEEDEEDVGRSR
GGKRNARKPKHKRKESYSSSNHSSYSESEQSSSASENSLASSGSHSSPKRRSHKRSGIGE
RTASRQLRQRRRRAASDEEEDSDEAYNSKPQRKTRVNTRNRGKRTVNYHDSE
NT seq 6819 nt   +upstreamnt  +downstreamnt
atggccaaaaatcggaacacttcgctccttgagtcggagctctattacttgatttctcgt
ttcctaacaacgggtccatgtcggagagcggctgaggtcctggcgagcgaactggaggaa
tatcagctcttgcccaggagactggactggcttggaaacgagcacccgagaacatatgaa
gatgtggttgcagccaacagacacattgcaccagaccatttgctacagatatgtaagcag
attggaccacttcttgacaaagaggtgccgtcatgtgtcccaggtgtacattctctcctg
gggtccggaaaacagtcgatgcttaggaccccgaaagactgcgacagtgtgtggtttaaa
gcttcatcatatgcagcccttcaccggggcagaccaccagagaggcctttgaactgcaag
aaccctccacccttagtgaaggtgcatcgagggagagagctgacgggagtgcatcgcttc
agctccatcaatcctgtcagcaactatgagcacatgcgactgcataggcggatcctgggg
catctgtctgcagtgtactgtatcgcatttgatcgcaccggtctcaggatcttcacaggc
tcggatgactgtttggtgaagatttggtcttcgttcgatggaaggcttcattcgacgttg
cgaggacactctgcagaaatcacagacctggcagttaattatgagaacacgctaattgcc
gccggaagctgtgacaagaccatccgtgtgtggtgccttcgtacctgtgcccctgtggct
gtgctgcaggggcacagtggatccattacctcccttcaattctcaccgtttgccaagggc
tcaaaacgttacatgctgtccactggaactgatgctacggtctgcttctggcagtgggac
gtcaacaacatcaacttcagtgatcggccacataaatttacagagcggccaaggccagga
gttcagactgtgtgctcctcattcagtccaggtgggatattcttagcaacaggaagtacc
gacgatgtcatcagaatatattacttgggaagcggcagtccagaaaagatatcagagctc
catgagcacacggacaaagttgatagcatccagttttgccactcaggtgaaaggtttgtg
agcggaagtcgtgatgggacagcacggatctggaagctccatcagcggcagcaatggagg
tgcatcttgctcaacatgtccgccactcttccaggtgctgaagcattgagtgaagaggaa
agctacttcaaacccaaagtcaccatggtagcgtgggatcgccatgacaatacagtcatc
acggctgttaacaaccatctcctcaaagtgtggaactcctacacaggacagctgctacat
atccttaaaggccatgaggctgaggtgtttgtcctggaaccgcacccttttgacccaaga
ataatcctatctgctggccatgatgggaatgtcttcatatgggatctgctgcgggggacg
aacacacagcactactttaacatgattgagggtcagggtcacggagccgtgttcgactgc
aaattcactcccgatggccaacgtttcgcctgcacagactctcacggccatctgctcatc
tttggcttcggcagttccaagccatacgagaagcttccagaccaggtgttcttccacaca
gactataggccgctgatccgggacgccaacggctttgtgttggatgaacaaacacagcag
gcaccccatctcatgcccccgcccttcttggtggacgtggatggaaatcctcatccaccg
aggtaccagcgtcttgttccagggagggagaacattgctgctgaacacctggttccgcag
ctgggatacgtagccaccagtgatggcgaggtggtggagcaggtgatcagccagcagact
gcagagcatgaggaggtcacggtaagacgcagcagccttctggatgaggccatccgacag
ctccaggagcaacaggaccgacagaaccagcctgggacagagtcagcaccgggtgctgga
gtagggccagaggggcaagcagaggcacagggcccagccttggcaccagcaccaagcaca
ccacgcagagtgtctgtgaatgatcgagcagatgtgcagtcacctcctaatgtcggcctg
cgccgcagtggacaggtggagggcgtccggcagatgcaccagaatgctcctcgcagccag
atggccactgagagagacctgcaggcctggagacgcagggtggtggtgcctgaactggca
cccagcagctacagggaccaggaggacatccgaacagccaaaggagacgaggaggtggct
ctgtacaatgcaaagaagagacgcattatctacagtagctgccgagatgattcagatgat
gagcctcccacttctaagcgaggccacagccgcggtgacacgatggatttcattgacctg
tcatgtgaagagggagaagagaccgcaagctcagaggtacacactgaggacaatgaattg
gatgggagtgaactggagtcgtccaatgatgaggaggagtggaacagtgacagctcaagc
cacacatccagcgagtactcagactggacggcagacgctggtatcaacctgcagccctcc
acccccttgtcgtcacggaaacgagtgcggcgcagactcagcacctccgaagaggaggag
gaagagaatgaggaagaggaggagaagcagcagcagagtgatgaggatgaaaaacctggg
aaaaaaagcaaagagaaggccaagaaggcaaagaacaagtcacctcggcgtccaaaggcc
agaccatccatcaacagagaagtgtccaatgagttcagaccctcaccatggatcactgat
gtcatccccaggaagtctccttttgttccccaaatgggcgatgaggtgatctactttcga
cagggacatgaagcctatgttgaggcggtgagccggaatgaactgtacccaatcaactta
gacaaacagccctggaagaaaatggagctgcgggaccaagagtttgtgaagatcactggg
atcaaatatgaagtctgccctccaacactctgctgtctgaagctcactcttattgaccat
ggcactggcaaaatcacagacaagtcgttctctgtcaagtatcacgacatgccagatgtt
atagatttcctggttttgaggcaaagctatgatgaggcactccgtcgaaactggcaacca
aacgacaggtttcgctcagtaatagatgatgcctggtggtttgggaccatcgtctgtcag
gagccttaccagccagaatatcctgacagtctcttccagtgtttcaaagtcagatgggac
aacggagaaactgagaaactgagtccttgggatgtggagcctattccagatgatgctcaa
cagccagagacagagggaggtggtatccctgtgacagcagatgagatgagcgagctgatg
tacaaacctctgccaggggagtggggggagaggagcagggacgaggagtgtgaacgcatc
atcgctggcatcgaccagctcatcaccgttgagattgcagctcccttctctggtcctgtg
gacttggtccagtatcccacctactgtactgtgatcgcctatcctactgatctgggaacc
atcagactgagactcatgcacagattctacagacgcctctcagcattaatttgggatgcc
aggtatattgcacataacgcccgcactttcaatgagccaaggagcaagattgcccactct
gcaaaaatcatcacaaatgtcctccagaaatttgtcaataatccaagctgcacagatatc
atggagatttacaatgctgttgaggagatggatgatgatgaagaggatgaggatacagaa
gcaccaggaacctcagctggacaccggttacgtcagcgttctgtagaggtggtgccagac
agagacgcctggaaggaacagtgcaagaatcttcttaactacatatttcagtgtgaggac
tcagaaccgttcagacagcctgtggatcctcagaactatccagactaccatgacattatc
gatacacccatggactttggcacagtgaaaaggaccctggaggaggaccactatgaaaac
cctatagagctttgcaaagacacccgcctaatatttgccaatgctaaagcctacacaccc
aataaacgctccaagatttacagtatgactttgcgactctcggccttcttcgaggacaaa
atcagaacaatcatatctgaatacaaaactgctgtgaagagcagtgatagactccgtcgc
agtcagaggttccgcaagaaaatgcagcaacaggatcagcccactgccacaacaagtcaa
aagagggctgcagtcaaaactcaggaaaaagtggagtcgacgtcagtgaccaaatctacc
tcagccaaagtgtctgttcctgagagagccaggaggagtcgaagcagcagctcaggtcac
agctcctcggaggacgactcagtctccaaagctgcttcgtcaacacctgagtctgacagt
gagagtgagccaagtgagtcagaggaggagaaacgtcctggttcctcaaggcaccatcag
cgcagacagaaagcaagagttacaagaggcaattgtggcaagcagaggaaaaaagttgca
gagagtgatagtgaagaggaggaagaagaagaggaggaggaggaagaggaggaggaggag
tttgacagtgaaggtgaagagggtgaggatggtgaagtgtcctcccagtcttcaggtcgt
cgctaccccagcaggagtaaaaacagcaggagtacacggctgaccagaaacagcgctgct
gcagacaggaaacggacagagggcagagcggagatgaacggtcacagcagccggtcgtct
cgcagggagagacgtcaccaccaggactctgacagagccacgtcgcagggctcggacagg
gaggaagaggaagtcacgggccgcaggtcactcaagagaaagacggcgagggcagctgtg
aataagatcaaactcctcgaggcatcagatgaagactatgaagaggaggagaagccaaca
cgaagcagcagccggcttcgccatacagcccgggccagcaaacgcactgcagtgatccag
agcagctcagattcagatggaggcccgtcaacacggggttctcggaatatgaaagaatca
ggtcgtgaatccaaggacgagggggatggaaatgacagcgacgcttcatcctcctcccag
aatcagcagaatggcgacacgaggtccaacaaacagaggacgtcaagacaagctgctaaa
acaaagggaaatgatactttgtcccatgtgaacggacacagtgaaaaacatcacaagtct
gatagcaactctgagcaggaggaaacggcagaggagagttcgggtgaagctgaggaggag
gaggaggaggaggaagaggaacaggtggccgtgtctcggaaaccttctagaagcacagca
accactccagccaggaaaaagaggattacaagtgaggaggaagaggaggaggtagaggac
actgaacgcagagtgacacgacacaaacctcctgtaagctcagacgaagaggacaaagac
cacagttcccagaaacacccacaccaaaacgggagaaatgtggaggaagtgatccacaag
gactctaagaaaaagagtaaagtttcaccatcaaaaagccaagacaaacaaaaatctgcc
tcagctaataaactggatggtgcagaatcagacgaactcagtgattctccaaagagatcc
agcccacgcaagacgagactgaaaaaagacaaagagcgtgaagaagaaagcaatcactcc
agtgaggaaattgaggttgaaacaaagacaaggcggtcagcacgaaacaaaagcaaatct
aaacggcctcatggtggcacctctgcttcagagagttctgagcaggaatacaaacccaaa
aggaagtcgaggaggaaacgctccaccggctcatcagacgaagagtcggataattcagat
aacacatcaaatagacggctgagtctccgagccctaccaaaaaagaaatacatcagtgac
aactctttttcggaggaagactctgcttctgtgagccagggtaaacagagaaacggcaac
aaaacagccacagcttctagggaggacaagtacaataagagagagtctaacagaacctct
cccagtgaaaccaggaatcagctgtcttccaagagaaaacgtatttacacctcagactct
gaagatggggaggaggagagagaggagccagtgtccaagaacaataaaaatggtaggtca
ggctcctcaaagcgtcccaaaagggaatccaaacaaggggatgataacagcaatgaggag
gacacctcttcccagtctgattccagcgaggaggacgaggaagatgtcggtcgttcacgg
ggcgggaagaggaacgcgaggaagccaaaacacaaacgaaaggaaagctacagcagcagc
aaccacagttcttactcggaaagcgagcagtcgtcttcagcctctgaaaactcattagcc
agctcagggtcccacagcagtccaaagaggagaagtcacaaacggtctgggatcggcgaa
aggactgccagccgccagctgaggcagcgccggcgacgggctgcctcagacgaggaggag
gacagcgacgaggcgtacaacagcaaaccgcagcgaaagacgcgtgtgaatacccggaac
cgggggaagcggacagtaaattatcacgacagcgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (101)   

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