KEGG   Lates calcarifer (barramundi perch): 108874647
Entry
108874647         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein jagged-1a-like
  KO
K06052  jagged-1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04330  Notch signaling pathway
lcf04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108874647
   04371 Apelin signaling pathway
    108874647
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:lcf04090]
    108874647
CD molecules [BR:lcf04090]
 Proteins
  108874647
SSDB
Motif
Pfam: EGF hEGF MNNL EGF_2 DSL DL-JAG_EGF-like JAG1-like_EGF2 EGF_CA DAG1 EGF_3 SID-1_RNA_chan FapA RCR
Other DBs
NCBI-GeneID: 108874647
NCBI-ProteinID: XP_050926875
Position
LG5:986189..1009276
AA seq 1243 aa
MTLTRSSVLLSLQLLLLSARIQVSSASGHFELQILSMQNVNGQLQTGACCDGPQDATDQR
CTVDECDTYFRVCLKEYQLKVSSAGPCSFGIAATPVLGGNSFSLRNSKSDKARIMLPFSF
AWPRSYTLIVEALDFNNDSSSSSVGGAVIEKAVHSGMINPGRQWQSLKHNGPVAQFHFQV
RLSCDEHYYGFGCNKFCRPRDDFFGHYECDHNGNKTCLEGWSGPDCNTAICRQGCSTEHG
SCKVPGECKCLYGWQGEYCDQCIPHPGCVHGSCVEPWQCLCDTNYGGQLCDKDLNTCGTR
QPCLNGGTCSNTGPDKYHCSCPDGFSGVNCQRADHACLSSPCVNAGSCVETSQGFECRCA
PGWTGPSCSINVDECLVNPCSHGGTCQDLVNGFRCICPPQWTGKTCLIDANECNDNPCVN
ANSCRNLIGGYFCECLPGWTGQNCDSNINDCRGQCQNGATCKDLVNSYKCVCAPGFTGEH
CDRDVDECSSGPCLNAGRCHDEVDGFHCLCPPGFSGSRCQLDIDYCLHRPCQNGGQCFNL
AADYVCQCPEDYDGRNCSRLKDHCRTTPCKVIDSCTVAVASNSTASGVRLISSNVCGPHG
RCRSHAGGQFSCECEEGFTGTYCHENINDCESAPCLNGGTCIDKVSQYQCICAEGWDGPT
CQNNIDDCSSAPCQNRGVCRDLVNDFYCECNNGWKGKTCHSRESQCDEETCNNGGTCYDE
GDAFKCLCAAGWDGATCNIAKNSSCLPSPCENGGTCVVDGDSFSCVCKEGWEGATCSHNA
NDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCSFGSTCVDEINGYR
CICPPGRTGPRCQEVTGRPCVVGELVALDGSRWDEDCNSCRCHNGRVTCTKLWCGPKPCS
LHSKTHSSECPAGQTCVAVQDERCFIKPCSNQGECWSPAHRAPPTARCHPESSCANVTFT
FNKDIMTKGVTVEQVCRDLRTLYVVQNLSSDSSVSMTCEPSLDANNEIHVAISTEDRRGG
TTFVKEITDRIMDLVSKRSANSSIISAIAEVRIQRRPSHNPNDYLVPLLVSVVIVVWALV
VASMLLWCVKRRRKQSAHTGVSTQASSSLAPATEDNNALHNSVSAAREQLNHIKNPIEKN
PPNHHQQQQQQHHHLLLHHHLYEDKNSVNAKIRKSDSSSQSDEEEVDKRLQKARFARAPP
AYSLVDWEERPPTXTTGKTPHWTSKQDNRQLQSQGVNRMEYIV
NT seq 3732 nt   +upstreamnt  +downstreamnt
atgaccctcacacggagctccgtcctcctcagcctgcagctcctcctgctctctgcccgc
atccaggtttcctcagcgtccggacactttgagcttcagattttgtcgatgcagaacgtt
aacgggcagcttcagaccggcgcctgctgcgacggaccccaggatgccacggatcagcgg
tgcacggtggacgagtgcgacacctactttcgggtgtgtctgaaggagtaccagctgaag
gtttcctccgccgggccctgcagctttggcatcgccgccacgcctgtactcggtgggaat
agcttttctttacgcaactccaagagcgacaaggccaggatcatgttgccgttcagcttc
gcgtggccgaggtcgtacacgttgatcgtggaagctttggacttcaacaacgactcgtcc
tcgagcagcgtcggcggggcggtgattgagaaagccgtccactcggggatgatcaacccc
ggccgtcagtggcagagcctgaagcacaacggccccgtggctcagttccacttccaggtc
cgcctcagctgtgacgagcactactacggcttcggctgcaacaagttctgccggccgcga
gacgacttcttcggtcactacgagtgcgaccacaacggcaacaagacgtgtctggagggc
tggtccggtccggactgcaacactgcgatctgcagacagggctgcagcacagaacatgga
tcctgtaaagtcccaggagagtgcaagtgtctgtacggctggcagggagagtactgtgat
cagtgtatccctcaccccggctgtgttcacggcagctgtgtggagccctggcagtgtctc
tgtgatacaaactatggaggacaactgtgtgacaaagatctgaacacgtgcgggacgcgg
cagccatgtttgaacggaggaacctgcagcaacacgggaccagacaaataccactgctcc
tgtcccgacggcttctccggagtcaactgtcagagagcggaccacgcctgcctgtccagc
ccctgtgtgaacgccggcagctgtgtggagaccagtcagggttttgagtgtcgctgtgcc
cccggctggaccggaccctcctgctccatcaatgtggacgagtgtctggtgaacccctgc
agtcatggaggaacctgtcaggacctggtcaatggtttcagatgcatctgtcctcctcag
tggacggggaagacctgcctgatcgatgccaacgagtgtaacgacaacccctgcgtcaac
gccaactcctgcaggaatctgattggaggatacttctgcgagtgcctccccgggtggacg
ggccagaactgtgacagcaatatcaacgactgtcgcggtcagtgtcagaacggagcgacg
tgcaaggacctggtgaacagttataaatgtgtgtgtgctcctggtttcaccggcgaacac
tgtgaccgagacgtggacgagtgctccagcgggccctgcctcaacgccggccgctgccac
gacgaggtcgacggcttccactgcctgtgtccgcccgggttctcagggagtcgctgtcag
ttggacattgattactgcctccatcgtccgtgtcaaaatggcggccagtgtttcaacctg
gcggccgactacgtctgtcaatgtcctgaagactatgacggcaggaactgctcgcgcctg
aaggaccactgccgcaccacgccgtgcaaagtgattgacagctgcacggtggcggtggcg
tccaacagcacggcgagcggcgtgcgtttgatttcgtccaacgtgtgcggcccccacggg
cggtgtcggagccacgccggcggacagttcagctgcgagtgtgaggagggattcaccggg
acctactgccacgagaacattaacgactgtgagagcgccccctgtctgaacggaggcacc
tgcatcgataaagtcagtcagtatcagtgtatctgtgctgaaggctgggacggccccacc
tgccaaaacaacatcgatgactgcagctccgctccctgtcagaaccgcggcgtctgtcga
gatctggtcaacgacttctactgcgagtgtaacaacggctggaagggaaagacctgtcac
tccagagagagtcagtgtgacgaggagacctgtaacaacgggggcacctgctacgacgag
ggagacgccttcaagtgtctgtgtgccgccggctgggacggcgccacctgtaacatcgcg
aagaacagcagctgtctgccgagtccctgtgagaacggaggaacctgtgtggtggacgga
gactccttcagctgcgtctgtaaggagggatgggagggcgccacctgcagccacaatgcc
aacgactgcagccctcatccctgttataacagtgggacctgtgtcgatggagacaactgg
tatcgatgtgaatgtgctccggggttcgccggcccagactgcaggatcaacatcaacgag
tgccagtcgtcgccctgctccttcggctccacctgcgtggatgaaattaacggttaccgc
tgcatctgtccgccgggaagaaccgggccccgctgccaagaagtgacggggcggccctgc
gtggtcggggagctggtggctctggatggaagcaggtgggacgaggactgcaacagctgc
cgctgccacaatgggagagtcacctgcaccaagctctggtgtggacctaaaccctgcagc
ctccacagtaagactcacagctcagagtgtccggccggtcagacctgcgtcgccgtccag
gacgagcgctgcttcatcaaaccctgctccaaccagggggagtgctggagccccgcccac
cgggccccgcccactgccaggtgtcacccagagagcagctgcgccaacgtcaccttcacc
ttcaacaaggacatcatgaccaagggtgtgacggtggagcaggtttgtcgtgatctcagg
accctctacgttgtccagaacctgtcctcggattcctccgtctccatgacctgcgagccg
tcgctggacgccaacaacgagatccacgtggccatctcgacggaggaccggagggggggc
acgacgttcgtcaaggagatcacagacaggatcatggatctggtcagtaagaggagcgcc
aacagctccatcatcagcgccatcgccgaggttcgaatccagcgacgaccgagccacaac
cccaacgactacctggtgcccctgctggtttccgtggtgatcgtcgtctgggcgttggtg
gtggcctccatgttgctgtggtgcgtgaagaggcggaggaagcagagcgcccacacgggg
gtcagcacccaggcttcgtcgtcgttggcgccggcaacagaggacaacaacgccctccac
aacagcgtgagcgccgcccgcgagcagctcaaccacatcaagaaccccatcgagaagaac
ccgcccaaccaccaccagcaacaacagcaacagcaccaccacctcctcctccaccaccac
ctgtacgaggacaagaactctgtcaacgccaagatcaggaagtcagacagcagcagccaa
tcagacgaggaggaggtggataagaggctgcagaaggcgaggttcgccagggcgccaccg
gcgtactcgctggtcgactgggaggaacgaccccccaccnacaccacaggcaaaacccca
cactggactagtaaacaggacaacaggcagctgcagtcacagggcgtcaacaggatggag
tacatcgtatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (94)   
   KEGG ORTHOLOGY (1)   
   RefGene (90)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (114)   

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