KEGG   Lates calcarifer (barramundi perch): 108875147
Entry
108875147         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin-like
  KO
K05689  cadherin 1, type 1, E-cadherin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04371  Apelin signaling pathway
lcf04514  Cell adhesion molecules
lcf04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    108875147
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108875147
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108875147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108875147
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108875147
   04090 CD molecules [BR:lcf04090]
    108875147
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    108875147
Cell adhesion molecules [BR:lcf04515]
 Cadherins
  Major cadherins
   108875147
CD molecules [BR:lcf04090]
 Proteins
  108875147
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_3 RibLong TM_ErbB1 CcmD
Other DBs
NCBI-GeneID: 108875147
NCBI-ProteinID: XP_018519385
Position
LG10:complement(14902653..14908035)
AA seq 850 aa
MQRLGSLPFEQSSRSGPEDQSGDGGGQICRVSLLKEMMGNSTTFRLLFLLCHIQCLAVLA
AAGIQPRCSHNFSKNENLRNKNLENNSNMGFEQLSTIEFPQVSGVLKRMKREWVIPPIGF
PENDRGPFPKYMVKIKSSNEEKVAITYKITGPGTDQPPEGVFTIDRRSGVLYVTQPLDRE
KIAKYTLWAHAMNEGNKAEEPMELIINVIDQNDNAPQFTQNPFYGKVSESAAVGDPVIKV
TAVDKDDPHTNNAIIRYRIITQMPQWPKEDMFMINPVSGMISVVAGGLDRETHPEYKLTI
QVADMEGEGLAATCTVIISITDNNDNAPQFTVSSISTSVPENEVGVEVIRLRVTDEDEDG
SPNANTKYSIIKGNKGGEFNITTGSNKMEGVITTAKELDFESIPIFTLLVVVMNEVPFSW
AVSTSTATVEVAVVDKNEPPVFSPAEIHVRVSEDVKVGSSVAILRAKDPDTARTQSVRYK
LDKDLARWLSVDEDTGLVKVKHSMDRESHHVKDDKYTVLILGYDNDTVPATGTGTLVVTL
LDVNDHHPVIKQRKAHLCNKDPFPALLDIMDLDGPGHAGPFIVELQGDHRINWTISTNST
NNVAALAPKRELSPGDYHVLMRIYDVGALHQDSTLDVEVCQCEGAFSTCFIPHSAPQTHV
SSLATSVLGAVFCLLVLLLLLLLLLRRRRRSEKDAPLLEDIPRDNIFHYNEEGGGEEDKE
YDLSQLHRGLDNRPEVLCTDVFPTVQSRPRYRLQIQANEEIGKYIEDNMHAANNDPTAPP
YDSLLVFDHEGVGSEAGSLSSINSSDQDEEQDYQSLNHWGPRFSRLADLYTGGIEEDNDA
ETLPGKTEWV
NT seq 2553 nt   +upstreamnt  +downstreamnt
atgcaaagactcggcagtctgccatttgagcaaagcagcagatccggtccagaggatcag
tctggtgacggtgggggacagatctgtagggtttctttactgaaggagatgatggggaac
agcacaacatttaggttgctgtttttgctgtgccacattcagtgtttggctgttctggca
gcagcagggatccaaccacgctgcagtcacaacttctctaagaatgaaaacctgagaaac
aagaatcttgagaacaactctaacatgggctttgagcagctctccaccattgagtttcca
caagtgtctggcgttctgaaacgcatgaagagggagtgggttattccaccaattggcttt
ccagaaaatgacagaggtccattccccaagtacatggtgaagattaaatctagcaatgag
gaaaaggtggcgataacctacaagatcactggaccagggactgatcagccccctgagggt
gtttttaccattgatcggcgatctggggtgctgtacgtgacgcagccgctggacagggag
aagatagccaaatacaccctgtgggcccacgcaatgaatgagggcaataaggctgaggag
cccatggagctcattatcaatgtcattgaccagaatgacaatgctccacaattcactcag
aaccctttctacggcaaagtgagcgaaagcgctgcagttggtgaccctgtcataaaggta
acagcagtggataaagatgacccacacacaaacaatgcaataattaggtatcggataatc
actcaaatgcctcagtggcccaaagaggatatgtttatgataaacccagtgagtggaatg
atcagtgtggtggcaggtggactggacagagagactcacccagagtacaagctgaccatt
caagttgctgatatggagggggaggggctagcagccacctgcaccgtgatcattagcatc
actgacaacaacgataatgctccacaattcaccgtctcatctatatccacatcagtccct
gagaatgaagtcggagtggaggtaataaggctaagggtcactgacgaggatgaggatgga
tctccaaacgccaacactaaatattccataatcaaaggcaacaaggggggagagttcaac
atcaccacaggttccaataaaatggagggagtcatcaccacagccaaggagctggatttt
gagagcattcccatctttactctgctggtggtagtgatgaacgaggtgccgttttcctgg
gccgtgtctacctcaacagccacagtcgaggtagcagttgtggacaagaacgagcctccc
gttttcagtccagcggagatccacgtgagggtctcagaggatgtgaaagtagggagttct
gtggccatcctcagagcgaaggacccagacacagccaggacacagagcgttagatataaa
ctcgacaaagacctcgccaggtggctgagtgttgatgaagacacaggattagtcaaagtt
aaacacagcatggacagagaatcccatcatgttaaagacgacaaatacacagtcctaatt
ttgggttacgacaatgacactgtcccagctacagggacgggtactctggttgtgacttta
ttggatgtgaatgaccatcatcctgtgatcaagcagaggaaagcccatctatgcaacaag
gacccttttcccgccctgctggacataatggacctagacggaccaggtcatgctggacca
ttcattgtggagcttcaaggagatcacaggatcaactggactattagcaccaattccaca
aacaatgtggcagccctggcccccaaacgggagctctcacctggagactatcatgtgctc
atgcgtatctatgatgttggtgcgctccaccaagacagcacactggatgtggaggtgtgc
cagtgtgaaggggctttttccacctgctttatcccacactctgcccctcagacgcatgtt
tcttctctcgcaacctcagtcttgggagcagttttttgtcttctggtgctgcttctgctg
ctgctgctgttgttacgaaggaggaggaggtcggagaaggatgccccccttcttgaagac
atacccagagacaacatatttcactataatgaggagggaggaggtgaagaagacaaggag
tatgacctgagccagcttcacagagggctggataaccgtcctgaggtcctctgcactgat
gtgtttcctactgttcagagtcgccctcgctaccgcttacaaatccaggccaatgaggag
attggcaagtatattgaagataacatgcatgctgccaacaacgaccccacagctcctcct
tatgactctctcctggtgtttgaccatgaaggtgttggctctgaggcaggttcgctcagt
tccattaactcctcagatcaggatgaggagcaggactatcagagcctgaatcactggggg
ccacgtttcagcaggttggctgacctgtacacaggtgggatagaggaggacaatgatgca
gaaacattgccaggaaaaacagaatgggtctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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