KEGG   Lates calcarifer (barramundi perch): 108875296
Entry
108875296         CDS       T04895                                 
Symbol
washc4
Name
(RefSeq) LOW QUALITY PROTEIN: WASH complex subunit 4
  KO
K18465  WASH complex subunit 7
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108875296 (washc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108875296 (washc4)
Membrane trafficking [BR:lcf04131]
 Protein recycling
  Others
   WASH complex
    108875296 (washc4)
SSDB
Motif
Pfam: WASH-4_N WASH-7_mid WASH-7_C DUF3456
Other DBs
NCBI-GeneID: 108875296
NCBI-ProteinID: XP_018519624
Position
LG10:complement(18635678..18646814)
AA seq 1171 aa
MAVETIAPDWEFDRFDDGSQKIHTEVQLKNYSKFLEEYTSQLKGIEEALDDSIGDVWDFT
LDPIALKLLPYEQSSLLELIKTDNKVLNKVITVYAALCSEVKKLKYEAETKFYNGLLYYG
EGVSDTSVVEGESQIQMGRFISFLQELSCFVSRCYEVVVNIVHQLAALYSSSKGATKIIE
SSGVHFQIVYEHLGELLVVLLTLDEIMENHGTLKDHWKMYKRLLKSVHHNPGKFSIPEDK
LKPFEKLLLKLEGQLLDGMILQSCVEQRFDDPGEGVAVAKNGAFAEEFAFNIRTIFTSVE
SKIGEPSEIDQRDKYAGVCGLFVLHFHIFRSVDKKFYKALLDVCKKVPAVTLTANIIWFP
DTFLIAKVPAAAKLMDKKSLQAIRAQRDTYLQQRAQTLTKDVQSYYVFVTSWMMKMESIL
SKDHKSDKLADDLNSRCNVFVQGILYAYSISTIIKTTMNMYMSMQRPMTKTSVKALCRLV
ELLKAVEHTFHRRSMVVADSVSHITQQLQSQALNAIGTAKKRVISDKKYSEQRLDVLSSL
VLAENALSGPSTKERRLVVSLALCVGTQLKTFKDEELLPLQLVLKKLDLISELRERVKLQ
CDCSFLYWHRAVFPIYLDDVYDNAVDAARIHYMFSALRDSVLSMLYAKHMELCDQLLESY
DKEIMDVFKEHLLDKLCKEIEKDLRLSVHTHLKLDDRNPFKVGMKDLAHFFSLKPIRFFN
RFIHIKAYVTHYLDKTFYNLTTVALHDWATYSEMRNLATQRYGLTMTEAHLPSQTLEQGL
DVLEIMRNIHVFVSRYLYNLNNQIFIEKASNNKHLNTINIRHIANSIRTHGTGIMNTTVN
FTYQFLRKKFYIFSQFMYDEHIKSRLIKDIRFFRETKDQSDQKYPFERAEKFNRGIRKLG
ITPDGQSYLDQFRQLISQIGNAMGYVRMIRSGGLHCCSSAIRFVPDLEDIVNFEELVKEE
GLSEETQRAASVLDSVLGDLTSNSAEGTEYFKMLVAVFAPEFRSAKNMHLRNFYMIVPPL
TVNFVEHSISCKEKLNKKNKSGAAFTDDGFAMGVAYILKLLDQYLEFDSLHWFQAVRDKY
KKEMNAVVKEQNVQSASQDEKLLQTMNLTQKRLDIYLQEFELLHFSLSSARIFFRADKTA
AEETQEKKDKEEAAKAGGASDGSTPTDPASK
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggctgtagaaaccatcgcacctgactgggagtttgaccgttttgacgacggttcacaa
aagatacacacagaggtccaactgaagaactacagcaagttcctggaggagtacacatct
caactgaagggtatcgaggaggctctcgatgactccattggagatgtgtgggacttcacc
ctggaccccattgcgctgaagcttctcccgtatgagcagtcgtccttactggagttaatt
aaaacagacaacaaggttctgaacaaagtcatcacagtatatgcagcactctgcagtgaa
gtgaagaagctcaagtatgaagctgaaaccaagttctataatggcttattgtactatgga
gaaggagtgtctgacaccagtgttgttgaaggagagtcccagattcagatgggtagattc
atctcattcctacaggaactgtcctgctttgtgtcaagatgttatgaagtggtggtcaac
attgtccaccagctggctgccctctacagcagcagcaagggtgcaacaaaaatcattgag
tcgtcaggtgtccatttccagatcgtatacgaacaccttggggagttgttagtggtactg
ctcacacttgatgagattatggaaaatcatggcacactaaaagatcactggaagatgtat
aaaaggttattgaaatcggtacaccataaccctgggaaattttccatccctgaagataag
ctgaaaccatttgagaagcttctgctcaagctggagggacagctgctggatggcatgata
ctgcagtcctgtgtggagcagaggtttgatgatcctggggaaggagtagctgttgccaaa
aacggtgccttcgctgaggagttcgccttcaacattcgcaccatattcaccagtgttgag
tcaaagataggtgaaccttcagagatagaccagagagataaatacgccggcgtctgtggt
ctctttgtgcttcattttcacatcttcaggagcgtcgataaaaagttctacaaggcactg
cttgatgtctgtaaaaaggttccagccgtcacactgactgctaacatcatctggtttcct
gacacttttctcatcgctaaggtcccagctgcagctaaactgatggataagaaaagtcta
caggccatcagagcgcagagagacacctacctgcaacagagagctcagacactaacaaag
gatgttcagtcctactacgtgtttgtaacctcttggatgatgaagatggagtccatcttg
tccaaggaccataaaagtgacaagttggcagacgacctgaacagcaggtgtaatgtgttt
gtacagggtatcctgtatgcgtacagcatcagcaccatcatcaagaccacaatgaacatg
tacatgtcgatgcagcggcccatgaccaagacgtccgtcaaagcgctctgtcgactggtt
gaattgcttaaggctgtggagcacacatttcaccggcggtctatggttgtagccgactcc
gtgtctcacatcactcagcagctgcagtcacaggccctgaacgccatcggcacagccaag
aaacgggtgatctccgacaagaagtacagtgagcagcggctggatgtgctgtcgtccttg
gtactggcagaaaatgccctcagtggacccagcacaaaggagcgacgccttgttgtgtct
ttggctctgtgtgtcggcacacagctgaaaactttcaaagatgaggagctgcttccactg
cagcttgtgctgaagaaactggatctaattagtgaactgcgtgagagggtcaagctgcag
tgtgactgtagttttctttactggcatcgagctgtgtttcccatctacctagatgatgtg
tacgacaacgccgtggacgcagcacgaatacactacatgttcagtgcactgagggacagt
gtgctgtccatgttgtacgccaaacacatggagttgtgtgaccagctgctggagagctac
gacaaggagatcatggacgtgtttaaagagcacctgctggacaagctgtgtaaggagatt
gagaaggacctgcgtctctctgtccacacccacctcaagctggacgacaggaaccctttc
aaagttggcatgaaggatctggcccactttttctccctcaaacccatccgattcttcaac
cgctttatccatatcaaagcctatgtgacccactacctggacaaaactttctacaacctg
accactgtggctctgcatgactgggccacctacagtgagatgagaaacctcgctacacag
cgttatggactcacaatgacagaggcacacctgcccagccagactctggagcagggtttg
gatgttctggagatcatgaggaacattcatgtttttgtttcacgctacctttataacctc
aacaaccagatcttcatagagaaggcaagtaacaacaagcacttgaataccatcaacatc
cgtcacattgccaactccattcggacccacggcacaggcattatgaacaccaccgtgaat
ttcacctaccagttcctgcggaagaagttttatatcttcagccagtttatgtacgatgaa
cacatcaagtccaggctcatcaaggacatccgcttcttcagagaaacaaaggaccagtct
gatcagaagtatccatttgagcgagcagagaagtttaaccgtggcatcagaaagctgggc
atcactcctgacggacagagctacctggaccagttcagacagctcatcagccagattggt
aacgccatgggctatgtgcgtatgatccgctctggaggcctccactgttgcagcagtgct
atcaggtttgttcctgacctggaggatattgtcaactttgaggagctggtgaaggaggag
ggactgtcagaggagactcagagagctgccagtgtcctagattcagtgttgggagatctg
accagtaactctgcagaggggacggagtacttcaagatgctggtggcagtgtttgcaccg
gagtttcgcagtgccaagaatatgcacctgaggaacttctacatgattgtacccccactg
actgtgaatttcgtggagcactccatcagctgcaaagagaaactcaacaagaaaaacaaa
agtggagccgcttttacagatgatggttttgctatgggcgtggcgtacatcctgaagcta
ctggaccagtatctggagttcgactctctgcactggttccaggccgtcagagataagtac
aagaaagagatgaatgcagtggtgaaggagcaaaacgtccagtctgccagtcaggatgaa
aaattgctgcagactatgaacctcacccagaagaggctggacatctacctgcaggagttc
gagctgctccacttctccttaagcagcgccaggatcttcttcagagcggacaagactgca
gccgaggagactcaggagaagaaggataaagaagaagctgccaaagcaggaggtgcgtca
gacggctccaccccgactgaccctgcctccaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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