KEGG   Lates calcarifer (barramundi perch): 108876619
Entry
108876619         CDS       T04895                                 
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X1
  KO
K04505  presenilin 1 [EC:3.4.23.-]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04310  Wnt signaling pathway
lcf04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108876619 (psen1)
   04330 Notch signaling pathway
    108876619 (psen1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108876619 (psen1)
Peptidases and inhibitors [BR:lcf01002]
 Aspartic peptidases
  Family A22: presenilin family
   108876619 (psen1)
SSDB
Motif
Pfam: Presenilin
Other DBs
NCBI-GeneID: 108876619
NCBI-ProteinID: XP_018521769
Position
LG19:complement(20404641..20417347)
AA seq 487 aa
MANNAEDIENNMQNQQQSNGSPEPAQQPQEAGVTRVRSRGGSGAEGGGGGGGGRGGSGGG
NGSGPEQNGQPPAARAPRVVETEEDEDEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSV
SFYTQNDGQRLIYTPFPEDTDTVAQRALNSILNATIMITVIIVMTLVLVLLYKYRCYKVI
QGWLFLSSLLLLFFFSYIYLKEVFKTYNVAMDYFTLAVIIWNFGVVGMMCIHWKGPLRLQ
QAYLIMISALMALVFIKYLPEWTAWLILAVISVYDLLAVLCPKGPLRILVETAQERNEPI
FPALIYSSTMVWLVNMADTDRPKRNSTEAASPQQETQQAVASPAPSSPSQDDGGFTPSWV
SQQEHQLGPLQTTEETRREIQQLPSARPPVEDDDEERGVKLGLGDFIFYSMLVGKASAAA
SGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATDNLVRPFMDKL
ALHQFYI
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcgaacaatgcagaggatattgaaaacaatatgcagaaccaacagcagtccaacggg
tcccctgaacctgcccagcagccacaagaggctggggtgaccagagtgcggtcaagggga
ggctcaggagctgagggaggaggaggtggaggaggaggaagaggaggcagtggaggtggc
aacggtagcggaccggagcagaacggacagcctcccgctgcccgtgctcctcgtgtggtg
gagactgaagaggacgaagatgaagagttgaccttgaaatatggggccaagcatgtcata
atgctgttcgttcccgtaaccctctgcatggtggtggttgtggcaaccataaagtctgtc
agcttctacacccagaatgacgggcagagattgatctacacaccgttccctgaagacaca
gacacagtagcacagagagccctaaactccatcttgaacgccaccatcatgatcactgtg
atcatcgtcatgactttggtgctggtgctgttatacaagtaccgctgctacaaggtgatc
caaggctggctcttcctctcctctctcctcctgctgttcttcttctcctacatctacctc
aaagaggtttttaagacctacaatgtggccatggactacttcaccctggcggtaataatt
tggaacttcggagtggtgggcatgatgtgtattcactggaaaggacctctgcgactccag
caggcctacctcatcatgatcagcgccctcatggccctggttttcatcaagtacctgcca
gagtggactgcctggcttatattagctgtcatatcagtctatgatttgttagcggtgctc
tgtcccaaagggcctctgaggatcctggtggagacggctcaggagaggaacgaacccatc
ttcccagctctcatctattcttctacaatggtgtggcttgtcaacatggccgacacagac
aggccaaagaggaactcaacagaagcagcttcgcctcaacaggagacccaacaggctgtg
gcgtctcctgccccctccagtccgtcacaggacgacggaggcttcaccccctcctgggtc
agccagcaggagcaccagctgggacctctccagaccacagaggagaccaggcgggagatc
cagcagttgccctctgctcgtcctcctgttgaagatgacgatgaagagaggggcgtcaag
ctcgggctcggagacttcatcttctacagcatgctggtgggaaaggcctcagccgcagcc
agcggcgactggaacaccacgctcgcctgctttgtagccatcctcattggcctgtgtctg
accctgctcctcctcgccatcttcaagaaagcgctccccgctctgcccatctccattttt
tttggcctggtcttctacttcgccacagacaacttggtacggccctttatggacaagctg
gcgctacaccagttctacatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system