KEGG   Lates calcarifer (barramundi perch): 108876778
Entry
108876778         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ribosome biogenesis protein BMS1 homolog
  KO
K14569  ribosome biogenesis protein BMS1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108876778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcf03009]
    108876778
Ribosome biogenesis [BR:lcf03009]
 Eukaryotic type
  90S particles
   GTPase
    108876778
SSDB
Motif
Pfam: RIBIOP_C AARP2CN GTP_EFTU MMR_HSR1 AAA_22 RNA_helicase AAA AAA_16 nSTAND3 AAA_18
Other DBs
NCBI-GeneID: 108876778
NCBI-ProteinID: XP_018522026
Position
Unknown
AA seq 1204 aa
MDGKVKEQKRHQAKHSGPKAQKKLKKQGGSTEEDECKRNPKAFAVQSAVRMAKTFHRAQD
IKTKKHHIPLVDRTPLEPPPVVIVVVGPPKVGKSTLIRCLIKNFTRQKMGDICGPVTIVS
GKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMGV
LTHLDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFISVM
KFRPLVWQTSHPYVLVDRMEDLTDPERVRTDPKCDRTVSLYGYLRGTHLKNKGQVHVPGV
GDFQVSDVNFLPDPCPLPDAQKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDLPANHVN
QQQEEVRPTTELVQSLIDTHATLDAKMAASKVSLFSGSVTLDPTDIEQQSGEKEGPHEKQ
VWDPNTQRERRAVVFTEEEEEEDAVTGSSDEEDDNSEDSEQEKEADEEDDNLSTFLKDAR
ARSERTEKTAPPVKRQRVEEEMLVFADSEDDLEMSEEESEEKGQSGRAGDSGHCSEEDEE
ETEDEEEEDDDQESDDESVEEEGAALMEQTASESEEEGEKGTLKWKEGLQQKASEAFLRH
QEAAPNLRKLVYGSVVEADDSEEDKEELGGLFRVSRPQKSKKFKANAVDCSRFIPDTSHN
WDLEEMLNSIRDCFVTGKWEESQDAATLLKEDEELYGDFEDLETGEVHKGQTGLQDQAEN
SEKDDDNDDEAEESLVKVDDEEVQKNKRLDKKRRLKERFDAEYDDGDATYFDDLKEEMQK
QAELNRAEFEDVDDETRVQYEGFRPGMYVRLEISSIPCEFVINFDPHYPVILGGLGSSEG
NIGYLQMRLKKHRWYERILKTRDPLILSLGWRRFQTIPLYHIEDHNGRHRLLKYTPQHMH
CGASIWGPITPQGTGFLAVQSVAGTKANFRIAATGVVLDLDKSVTVVKKLKLIGYPYKIF
KNTCFIKGMFNTVLEVAKFEGASVRTVSGVRGQIKKALSTPPGAYRATFEDRLLMSDIVF
LRSWYPVSVPQLYNPVTSLLLPVGQKDNWAGMRTMGQLKHDLGIRNKPNADSLYKPIVRG
QRHFNPLHIPKELQKSLPFKSKPKQQQSKGKTPRDLQRPSVIREPHERKVAALLHALSTV
HNYKRKKAHMVQHAKHKEFLQQKGKQEEAKLKRQKEARKKLYRVMGQMDRKKLRSSLKGA
PQED
NT seq 3615 nt   +upstreamnt  +downstreamnt
atggacgggaaggtgaaggagcagaagcgacatcaggccaaacacagtggaccgaaggca
cagaagaagcttaagaagcagggaggctcaacagaggaggatgaatgcaaacgaaacccc
aaagcatttgcagttcagtctgctgtccgcatggccaagaccttccacagggcccaggac
ataaagaccaagaaacatcacatcccccttgtggaccgaactccccttgaacctcctcca
gtcgtgattgtggttgttggcccccccaaggtgggaaaaagcacccttatccgctgcctg
atcaaaaacttcacccggcagaagatgggggacatatgtggacctgtgaccattgtctct
ggaaagaagcggcgccttactttcatggagtgtaacaatgacataaacactatgattgac
cttgctaaagtagctgacttggttttgatgctgatcgatgccagctttggctttgagatg
gagacttttgagttcctcaacatctgtcaggtacacggctttcctcgtatcatgggtgtg
ctgactcatttggattcattcaagaacaacaagacactgaggaagacaaagaaaaacctc
aaacatcgcttctggacagaggtctaccagggagccaagctgttctatctgtctggtatg
gtgtatggtgaatatcagactcaggaagtgaagaacctgggccgtttcatttctgtcatg
aagttccgtcctctggtgtggcagacctcccatccctatgtgttggtcgaccgtatggag
gacctgactgacccagagagggtgagaacagacccaaagtgtgaccggactgtgtcactc
tatggttacctgagagggacacatttgaaaaacaaaggccaggtccatgtcccaggtgta
ggagactttcaggtgtcagatgtgaacttcctacccgacccgtgtcctctgccagatgct
cagaagaagagagcactgaatgagaaagaacgtctgctctacgcacccatggctggagtt
gggggggttgtgtatgacaaagatgctgtgtatatcgatcttcctgccaaccatgtaaat
cagcaacaggaggaggtgcgacccaccacagagctggtccagtctcttattgacacacat
gccaccttggatgcaaagatggctgccagtaaagtttctttgttcagtggctctgtcacc
ctggacccgactgacattgagcagcagagtggagaaaaggagggtcctcatgagaagcag
gtctgggatcctaacactcagagagagaggagggcggtggtcttcactgaggaggaggaa
gaggaagatgctgtcactggttccagtgatgaagaggatgacaacagtgaggacagtgag
caggagaaggaagcggacgaagaagatgataacctttctacatttctcaaagatgcaagg
gccagatctgaaaggacagaaaaaactgccccaccagtgaagagacagagggtagaggag
gaaatgctggtgttcgctgacagtgaagatgacctggagatgagtgaggaggagagtgaa
gagaaggggcagtctgggagagcaggagactctggacactgttctgaggaggatgaagaa
gagactgaagatgaagaagaggaagatgatgatcaagagtcagatgatgaatcagtggaa
gaggagggtgctgcactgatggaacaaacagcaagtgagagtgaggaggagggagagaag
gggactctgaagtggaaggagggtctgcagcagaaagcgtcagaggcatttctacggcac
caagaagctgcccccaatctgagaaaattggtttatggttcagttgtagaggcagatgac
tctgaagaagataaagaggagttggggggcctgtttcgagtcagtcgccctcaaaagagc
aaaaagttcaaggcaaatgctgtggactgttcccgcttcatccctgacacctcccacaac
tgggacttggaggagatgttaaactccatcagggactgctttgtaacagggaagtgggag
gaaagccaagatgcagccacactactgaaagaagacgaggagctgtacggtgactttgag
gatttggaaacaggagaagtccacaagggacaaactgggctgcaggatcaggctgagaat
agtgagaaggatgatgataacgatgatgaagctgaggagagtctggtgaaggtggatgat
gaggaggtccagaagaacaagcgtctggataagaaacgcagactaaaggagagatttgat
gcagaatatgatgacggagatgctacgtactttgatgacctgaaggaggagatgcagaaa
caggctgagctgaacagggcagagtttgaggatgtggacgatgagaccagagtgcagtat
gaaggcttccgtccaggaatgtatgtcagattagaaatctcctctatcccctgtgaattt
gtcatcaactttgatccccattacccagtcatccttggcggtctgggctccagtgaaggc
aacataggatacctgcagatgcgacttaagaaacaccgctggtacgagcgcatcctgaaa
acacgggaccccctcatcctgtccttaggctggaggcgcttccagaccatccctctctat
cacatcgaggatcacaacggacgccaccgcctgctcaaatacactccacagcacatgcac
tgtggagcctccatctggggtcccatcacaccacagggcactggtttcctggctgttcag
tcagtagcaggaactaaagctaatttccgtattgcagccacaggagtggtcctggatctg
gataaatcagtgactgtagtgaagaaactcaaactcatcggttatccctacaagatcttc
aagaacacatgcttcattaagggcatgttcaacacagtgctagaggtggcgaaatttgaa
ggtgcttctgtgcgaacagtgtcaggggtcagaggtcagatcaagaaggcgttgtctaca
ccaccaggagcttacagagccacgtttgaggaccgcctgcttatgagtgacattgtgttc
ctgcgttcctggtatccagtgtccgttcctcagctctacaaccctgtcacctctctgttg
ctgcctgttggtcagaaggacaactgggcaggcatgaggaccatggggcagctcaaacat
gatctgggcatccgtaacaaacccaacgctgactctctgtacaagccgatagtccgaggc
caaaggcatttcaaccccctccacattccgaaggagctccagaagtccctgcccttcaag
agtaaacccaaacagcagcaatccaaaggaaagacacccagagacctgcaacgccccagt
gtgatcagagagccccacgagagaaaggtggcggccctgctccatgctcttagcacagtt
cacaactacaagaggaagaaagcccacatggtgcagcatgccaaacacaaggagttcctg
cagcagaaggggaaacaggaggaggccaagctgaagagacagaaggaggcacgtaaaaaa
ctgtaccgtgtcatgggccagatggaccggaagaagctcaggtccagtctgaagggggcg
ccacaggaggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (62)   

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