KEGG   Lates calcarifer (barramundi perch): 108877950
Entry
108877950         CDS       T04895                                 
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcf03032]
    108877950 (top1b)
Enzymes [BR:lcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     108877950 (top1b)
DNA replication proteins [BR:lcf03032]
 Eukaryotic type
  DNA Topoisomerases
   108877950 (top1b)
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc
Other DBs
NCBI-GeneID: 108877950
NCBI-ProteinID: XP_018523731
UniProt: A0A4W6F5H7
Position
LG6:16001435..16014411
AA seq 768 aa
MSGDHGHGGSQVNSGSKGSDSHKHKDKHKDKEHRHKDHKKDKEREKFKHSNSEHKEHSEK
KHRDKEKLRHSDGSSDKHREKHKEKDKDKERRREEKIKSSDVDKPKKEKENGYVRDMSPA
AIKSEPEEDNGFYPSPHHKNSKREYDDEEFEFKPKKVKTEHDKKAKKRKHEYEEDEEDED
IKPKKKTKDKKVTEGKKAKKEEEEKWKWWEEERYTDGSKWRFLEHKGPVFAPPYEPLPGN
VKFYYDGKPMKLSALAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKSKITDL
NKCNFSEMNEYFKAQSEARKQMSKEEKQKIKEENERLLQEYGFCIMDNHKERIGNFRIEP
PGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLASWT
ENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRNQYRDDWKSKEMRIRQRAV
ALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPKMDDQEYVVEFDFLGKDSIRY
YNKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASIT
LQQQLKELTCPDDSIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQNQ
LSAARKQLKAAKADHKASHDEKSKKAVEVKRKAVQRIEEQLMKLQVQATDREENKQIALG
TSKLNYLDPRISVAWCKKYGIPIEKIYNKTQREKFAWAIDMAEKDYEF
NT seq 2307 nt   +upstreamnt  +downstreamnt
atgagcggagatcatggacatggaggctctcaggtcaattctggatctaaaggaagcgac
tctcacaaacataaagacaagcacaaagacaaggaacacagacacaaagatcacaagaaa
gacaaggagcgagagaaattcaagcacagcaacagcgaacataaggagcactctgagaag
aaacacagagacaaagagaagctgaggcacagcgacggcagctcagacaagcacagggaa
aaacataaagagaaagacaaggacaaagagaggaggagagaagagaagatcaaatcatct
gatgtagacaagcctaaaaaggagaaagaaaatggatatgtaagagacatgagcccagct
gccattaagagtgagccggaggaagacaacggcttctacccatctccccatcacaagaac
tccaagcgagagtacgatgatgaagaatttgaattcaagcccaaaaaagtgaagacagaa
catgacaaaaaggcaaagaagaggaaacatgagtatgaagaagatgaggaggatgaggac
atcaagcccaaaaagaagacaaaagacaaaaaggtaacagaaggaaagaaagccaaaaaa
gaagaagaggagaagtggaaatggtgggaggaggagagatatactgatggctccaaatgg
cgcttccttgaacataaaggtccagtgtttgcacctccctacgaacccctgcctggcaac
gtcaaattttactatgatggtaagcccatgaaacttagtgctcttgcagaggaggtagca
acattttttgctaagatgttggaccacgagtacaccactaaggacatcttcaggaagaac
ttctttaaggactggaggaaggaaatgacatcagaggagaagtcaaagatcaccgacctg
aacaagtgcaacttcagtgagatgaatgagtacttcaaggcccaatcagaggctaggaaa
cagatgtccaaagaggagaaacagaaaatcaaagaggagaatgagaggctcctccaggag
tacggcttctgcatcatggacaaccacaaggagaggattggaaacttccgcattgagccg
ccgggcctcttccgaggacgaggtgaccatccgaagatgggcatgctgaagcgccgcatc
agacctgaagatatcattattaactgtagcaaggactccaagcaccctaaacctccccca
gggacaaaatggaaggaggttcgtcatgataacaaggtgacctggctggcgtcttggact
gagaacatccagggctccatcaagtacatcatgttgaatcctagctccaggatcaagggg
gagaaggactggcagaaatatgagaccgcccgacggttgaagaagtgtgtggatcgcatc
cgaaaccaatatagagacgactggaaatcaaaagagatgaggatcaggcagagagcagtg
gcactgtatttcatagacaagctggcgctgagggcgggtaacgaaaaggaggaaggtgag
acagcagacacggttggctgttgctcactgcgggtggagcacatcaaactgtatcccaag
atggacgaccaggagtacgtggtggagtttgatttcttgggaaaagactccatccgctac
tacaacaagatccctgtggagaaaagggttttcaaaaaccttcagttgtttctggagaac
aagcagccagaagacgacctctttgaccgactgaatacttccattctgaataaacactta
caggagctgatggatggactgacagccaaggtctttcgtacctacaacgcctccatcacc
ctgcaacagcagcttaaggaacttacctgccctgatgacagcatcccagctaagatcctg
tcatacaaccgtgccaaccgggcagtggcaatcctctgtaaccaccagagagctccgccc
aaaacatttgagaagtccatgcaaaaccttcagaccaagattgacgagaaacaaaatcaa
ctgtctgcagccaggaagcagctgaaggccgccaaggctgatcacaaggcttcccatgat
gagaagagcaaaaaggctgtggaggtgaagcgcaaagctgtccagaggatagaggagcag
ctgatgaagctccaggtgcaggccacagacagagaggagaacaagcagattgctctgggc
acctccaagctcaactacctggatccacgcatctctgttgcatggtgcaagaaatatggc
attcccatcgagaagatctacaacaaaacccagagagagaagtttgcctgggccatcgac
atggctgagaaggactacgagttttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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