KEGG   Lates calcarifer (barramundi perch): 108878244
Entry
108878244         CDS       T04895                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K isoform X1
  KO
K12886  heterogeneous nuclear ribonucleoprotein K
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108878244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108878244
Spliceosome [BR:lcf03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108878244
SSDB
Motif
Pfam: KH_1 ROKNT KH_2 KhpA-B_KH MOEP19 DJ-1_PfpI
Other DBs
NCBI-GeneID: 108878244
NCBI-ProteinID: XP_018524251
UniProt: A0A4W6GAM0
Position
LG13:complement(8404940..8418403)
AA seq 436 aa
METEIEQQEETSFSNTETNGKRPAEDADEQKSFKRSRNSDEMVELRILLQSKNAGAVIGK
GGKNIKALRTDYNASVSVPDSSGPERILSISADIETVGEILLKIIPTLEEYQQYNGMDFD
CELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKTERVVE
CIKTMLELISEAPIKGRAQPYDPNFYDETYEYGGFTMMFEERGGGRRLMGGFQMRGGRSG
GGDRGFDRMPSSRGGRGPMPPSRRDYEEMSPRRGPPLPHPSRVGRGSGRGRNMPMGHPHR
GGEDRYYDSYRGSDDRSTDRRGRPDRYSDNMSGGGYDNSSSWDSYQSGGRGSYNDMGGPV
ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA
QYLLQNSVKQYSGHLL
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggagacagaaattgaacagcaagaagagacttcattcagcaacacagagactaacggt
aagcgccctgctgaggatgcagatgagcagaaatcattcaagcgctctaggaactcggac
gagatggttgagcttcgcatcctcctgcagagcaaaaatgcaggagctgtaataggaaag
ggtggcaaaaacatcaaagctctccgtacagactacaatgccagtgtgtcagtcccagac
agcagtgggcctgagcgcatcctgagcatcagtgctgacatcgagacagttggagagatc
ctgctgaagattatccccacactggaagagtaccagcagtacaatggtatggattttgac
tgtgagctgcgtctgctgatccaccagagccttgctggctcaatcatcggagtgaaagga
gccaagatcaaggagctccgggagaatacaaagaccagcatcaagctgtttcaggagtgc
tgtcctcagtcaacagaccgggtagtgctggttggcggtaaaacggagcgggtggtggag
tgtatcaagactatgctggagctcatttctgaggctcccataaaaggccgtgcacagccc
tatgaccccaacttctatgacgaaacatatgaatatggtggattcaccatgatgtttgaa
gagagggggggtggccgcaggctaatgggagggttccaaatgcgcgggggcagatctggt
ggtggagaccgtgggtttgaccgaatgccctcaagcagagggggacggggacccatgcct
ccttcccgtcgggattatgaagagatgagcccccgccgaggtcctcctctacctcaccca
agtagagtcggcaggggcagtggccgtggacgcaacatgcccatggggcacccacacaga
ggaggagaagatcgttactatgactcgtaccgtggctcagatgacaggtcaaccgacaga
agaggcagaccggatcgctatagcgataacatgagtggaggaggatatgacaacagttct
tcctgggatagctaccagtcaggtggacgtggctcctataatgacatgggtggtcctgtc
atcaccacacaagtgacgatccctaaagatctggctggctctatcattggtaagggaggc
cagcggatcaaacagatccgccatgagtctggagcctccattaaaatcgatgagcctctg
gagggttctgaggaccggatcatcaccattactggcacccaggatcagatccagaacgcc
cagtaccttctacagaacagtgtgaagcagtactctggtcatttgctgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (47)   

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