KEGG   Lates calcarifer (barramundi perch): 108878511
Entry
108878511         CDS       T04895                                 
Symbol
tubb2b
Name
(RefSeq) tubulin beta-2b chain
  KO
K07375  tubulin beta
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108878511 (tubb2b)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    108878511 (tubb2b)
  09142 Cell motility
   04814 Motor proteins
    108878511 (tubb2b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108878511 (tubb2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108878511 (tubb2b)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108878511 (tubb2b)
   04147 Exosome [BR:lcf04147]
    108878511 (tubb2b)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108878511 (tubb2b)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108878511 (tubb2b)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108878511 (tubb2b)
  Exosomal proteins of colorectal cancer cells
   108878511 (tubb2b)
  Exosomal proteins of bladder cancer cells
   108878511 (tubb2b)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 108878511
NCBI-ProteinID: XP_018524812
UniProt: A0A4W6G6E4
Position
LG13:22129777..22132389
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPSYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcatcttcaagccggccagtgcggaaaccagattggtgccaagttt
tgggaggtgatcagtgatgagcatggtattgacccaacgggtacgtaccatggtgacagt
gacctgcagcttgacaggatcaatgtctactacaatgaagcctcaggcggtaaatatgtg
ccccgtgctgttctggttgatttggagccagggactatggactctgtgaggtctggacct
tttggccaggtcttcagaccagacaactttgttttcggccagagtggtgctggcaacaac
tgggctaagggtcactacactgagggtgcagagctggtagactcggtcctggatgtggtg
agaaaagaggcagagagctgtgattgcctgcagggcttccagctcacacactccctgggt
ggtggtacaggctctggtatggggaccctgctcatcagcaagatccgcgaagagtaccct
gaccgaattatgaacaccttcagcgtggtgccttccccaaaagtgtcagacacagtagtt
gagccctataatgccacactctcagtccaccagcttgtagaaaacacagatgagacctac
tgcattgacaacgaggccctatatgacatctgtttccgcaccctcaaactcacaacccct
tcatatggtgacctgaaccacttggtctctgccaccatgagcggtgtcaccacctgcctc
aggtttcccggacagctcaatgctgacctgcgcaaattggctgtaaacatggtgccattc
ccccgtctgcacttcttcatgccaggctttgctcccctcacaagcagaggcagccagcag
tacagatcactcactgtgccagagctcacccagcagatgttcgatgccaagaacatgatg
gctgcttgcgacccacgtcacggccgctacctgactgtggccgccatcttccgtggccgc
atgtccatgaaggaggtggatgagcagatgctgaatgtgcagaacaagaatagcagctac
tttgttgaatggatccccaacaacgtcaagactgcagtctgcgacattcctccacgtggc
ctcaagatggctgccaccttcattggcaacagcacagccattcaggagctgtttaagcgc
atttctgagcagttcacagctatgttcaggcgcaaagctttcctccactggtacaccggt
gagggtatggatgagatggagttcacagaggcagagagcaacatgaacgacctggtctcc
gagtaccagcagtaccaggatgctactgctgaggaggagggagagtttgaggaggagggt
gaggaggagctggcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (709)   
   KEGG ORTHOLOGY (1)   
   RefGene (705)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (730)   

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