KEGG   Lates calcarifer (barramundi perch): 108878678
Entry
108878678         CDS       T04895                                 
Symbol
tcf7l1b
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
  KO
K04490  transcription factor 7-like 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04310  Wnt signaling pathway
lcf04520  Adherens junction
lcf04916  Melanogenesis
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108878678 (tcf7l1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    108878678 (tcf7l1b)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    108878678 (tcf7l1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108878678 (tcf7l1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108878678 (tcf7l1b)
Transcription factors [BR:lcf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    108878678 (tcf7l1b)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 108878678
NCBI-ProteinID: XP_018525127
UniProt: A0A4W6G744
Position
LG13:14755035..14788024
AA seq 581 aa
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENVSAERDLDDVKSSLVNESENNSSSSD
SEQAERRPQTRPDSESYEKTRDYFSEALRRQQDGGFFKSPHYPGYPFLMIPDLTNPYLSN
GSLSPSARTYLQMKWPLLDVPGSAGLKDSRSPTPGHLSNKVPVVQHAHHVHPLTPLITYS
NEHFSPGTPPSHLSPEILDPKTGIPRTPHPSELSPYYPLSPGAVGSIAHPLGWLMPQQGQ
HMYSIPPGGFRHPYPALAMNASMSSLVSSRFSPHMVTPPPHSLHQTGIPHPAIVSPAIKQ
EPSGDNISPSMHARKSPVPPKKEEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAI
NQILGRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRENKPDSKPE
DFSIRSKKQCVQYLPSEKMCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSL
TTKPEGRMHHHFSLPGKASGSTSSSSSSSSSSSSSSQPTISIPIGTSGSHSTTPILTRPI
PFTSLHPPMLSPPSPFHQAALHSHHALFQSQPLSLVTKPTE
NT seq 1746 nt   +upstreamnt  +downstreamnt
atgccacagctgaacggaggcggtggggacgatttgggtgccaatgatgaaatgatatcg
tttaaagacgaaggagagcaggaggaaaagatatctgagaatgtgtccgcggaaagggat
ttggatgatgtgaaatcctccttagtgaacgagtcggaaaacaacagcagctcctcagac
tcagagcaagcagagaggcgcccccaaaccagacccgactcagaaagttatgagaaaaca
agagactacttcagtgaagcactgagaaggcagcaagatggtggcttttttaagagccct
cactatcctggctacccgtttctcatgatcccagacctcaccaatccctacctatccaac
ggttcactgtcccccagtgcgagaacatacctgcagatgaaatggcctcttttggatgtt
cctggatctgcaggactaaaagactcccgctctccaacaccagggcatttatccaataaa
gtcccagtggtgcagcacgcccaccacgtccacccactgacgcccctcatcacctacagc
aatgaacacttctcccccggcacgccaccgtcacacctctccccggagatcctcgaccca
aagacaggtattccccggacacctcacccatcagagctctccccatattaccccctgtct
cctggtgctgtcggttccattgcacaccctctgggctggctcatgccacagcagggccag
cacatgtactccatccctccagggggattccgtcacccctatccagcgctagcaatgaat
gcatctatgtccagcttggtgtccagccgtttctctcctcacatggtgactccacctccg
cacagcctccaccagactggcattccccaccccgccatcgtctccccagccatcaagcag
gagcccagcggtgacaacatcagcccctcaatgcatgccaggaaatcccctgttcctccc
aagaaagaagaggacaagaagcctcatatcaagaagccgctgaatgctttcatgctgtat
atgaaggagatgagagccaaagtagtggcagagtgcactctgaaagagagcgcagccatc
aaccagatccttggaagacggtggcattccctgtcaagagaggaacaagccaaatactat
gagctggccagaaaagagaggcaacttcactcccagctctatccaggatggtcagcacga
gataactacggaaagaggaaaaagaggaagagagagaataaaccagactcaaaaccagaa
gacttctcgataagaagcaagaagcagtgcgtgcagtacctgccctcggagaagatgtgc
gacagccccgcgtcgtcccacggcagcatgttggactcgcccgccactccctccgcagcc
ctggcctccccggccgcccctgccgccactcactccgagcaggcccagccgctatcactc
accaccaaaccggagggacgcatgcaccaccacttctccctacctgggaaggcttccgga
tccacatcctcctcttcctcctcctcttcttcttcttcctcctcatcccaacctaccatc
tcaatcccaattggtacttcaggtagccattcaaccacacccatcctcacccggccaatc
cccttcacctctctgcacccccccatgctctcccctccctcccctttccatcaggcagcc
cttcactcccatcatgccctgttccagtcgcagcccctgtccttggttaccaaaccgact
gaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system