KEGG   Lates calcarifer (barramundi perch): 108879853
Entry
108879853         CDS       T04895                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108879853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcf03009]
    108879853
Ribosome biogenesis [BR:lcf03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108879853
SSDB
Motif
Pfam: WD40 Utp13 ANAPC4_WD40 NBCH_WD40 Cytochrom_D1 DDHD
Other DBs
NCBI-GeneID: 108879853
NCBI-ProteinID: XP_018526793
UniProt: A0A4W6DW57
Position
LG11:11639158..11654033
AA seq 932 aa
MANTSLHFKTNYAVSSKIEPFYKGGKVQISKDEKHIFCTCGSRVNVLEISTGKIVHSVEH
DDQEDITSFALSCDDELLVTASRALLLKQWDWRQAQCTRSWRAIHTVPVASMTFDSTSTL
LATGGCDGTIKIWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSLDCGIRLWDLR
SSQCVCVLQSHYSTVTSLCFSPDGGTMVSSGRDKICTVWDLKTQKAKRTVPVYEAVEGVV
LLPENQDFSQIGVKSKDLHFITAGSKGVLRVWEASTARCVYTQTLASTLTPVSGEEVEER
DDDPRSLTHLLHLPTSSRLAAVTAEHNIMLYQLPGLTTQQQFVGYSDEVLDVKFLGKGDS
HIVVATNSCQLKVFELLTNSCQILYGHTDTVLSLDVFKKGSLFASCAKDRSVRVWQMDSN
SGQVSCVAQGCSHANAVGSITCSRMKASFIVSGSQDCTVKVWDLPADLSTAGAEIHQLTA
RATEKAHDKDVNSVAVSPNDKLLASGSQDRTAKLWSLAGEGNVGLLGVFRGHRRGVWAVC
FSPVDQVLATSSADGTTKLWSLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVK
LWTIKTNECVKTLDAHQDKVWGLHASRKDDKMATGSADSNITVWVDVTEVELAEEQAKQE
DQILKQQELSNLLHEKKYLKALGLAILLDQPHTVLTVIKAIRQGEDRRELLEKTLLKLRV
DQKESLLRYCVVWNTNARNCQDAQAVLQVLLTHLPPEELLQYQGARAHLEGLIPYTERHM
QRIGNLLQASMFLNYMWQKMRVAGAPSSMGQDEEMDTTPLAKPFFMIDKEKGKDSGEEKR
DTGNDSDSGQDEDPKCPAEEEEEDNDDEVSVTKKASTTNARLENGESTKTNGNRRSENEE
SSEEEDMEEDDQTKAMRRLPVSSAPQCQTLAS
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcgaacaccagccttcacttcaaaacaaattatgctgtttccagcaagattgagccg
ttttacaaaggagggaaagtgcagatcagcaaagacgagaaacacatcttttgcacttgt
ggctctcgtgtcaatgttttggagatcagcacggggaagatcgtccacagtgttgagcat
gacgaccaagaggacatcacatcttttgcactcagctgtgacgatgagctgctggtaaca
gccagcagggctctgctgctgaaacagtgggactggaggcaagctcagtgcactcgctcc
tggagggccattcacaccgtgcctgtagccagcatgaccttcgactccacctctaccctc
ctagcgacaggtggctgtgatggcaccataaagatttgggatgtggtgaagcagtactgc
actcataacctgaaagggtcatccggtgttgtgcacctggttcagttccacccggacatc
agccggctgcagctcttctcctcctctctggactgtggaattcggctgtgggacctgcgc
tccagtcagtgtgtgtgtgtgctgcagagtcactacagcaccgtcacctccctctgcttc
agtcctgatggtggcaccatggtcagttctggcagagataagatctgtacagtgtgggac
ctcaagactcagaaagccaagaggactgtacctgtctatgaagctgtggagggtgtcgtg
ctgctgcctgagaatcaagatttctctcagattggagtgaagagcaaagacttgcatttc
atcacagctggcagcaaaggtgtgttgagagtgtgggaggccagcacggcacgttgcgtc
tacacccagaccctcgcctccaccctcacccctgtttctggtgaagaggtggaagagagg
gatgatgacccccgcagtctgactcacctgcttcacctgcccacctcctccagactggct
gcagtcactgctgaacacaacataatgctctaccagctgcctggcctcaccacacagcag
cagtttgtgggttacagtgatgaggtgctggacgtgaagttcctgggtaaaggtgacagt
cacatcgtggtggccaccaacagctgccagctgaaggtgttcgagctgctcaccaacagc
tgccagatcctctacggtcacacagatactgtcctctcactggatgtgttcaagaaaggc
tctctgtttgcaagctgtgctaaggacaggtccgtgcgtgtgtggcagatggacagcaac
agcggtcaggtgtcatgtgtggcccagggctgcagccacgctaacgctgtgggctccatc
acctgctccaggatgaaagcatctttcatagtctcaggcagtcaggactgtaccgtgaag
gtgtgggatctaccagcagacttgtctacagctggggcagaaatacatcagctgaccgcc
cgcgccacagagaaggcacacgataaggatgtaaacagcgttgcggtgtcacccaatgac
aagctgctggcctcgggctcccaggaccggaccgccaagctgtggtcgctggcgggcgag
ggaaatgtgggcctgctgggggtgtttcggggccaccgtcgtggcgtctgggccgtctgc
ttctctcccgtcgaccaggtgctggccacgtcctctgcagatggcaccaccaagctctgg
agcctgcaagacttcagctgcctcaagacttttgagggacacgatgcatcagtgttgaag
gtcatttttgtgagccgaggcactcagctgctcaccagtggctcagacggtttagtaaag
ctgtggaccatcaagaccaacgagtgcgtgaagacgctggacgcgcaccaggacaaggta
tggggtctccacgccagccgtaaagatgacaagatggcgactgggtcggcggactctaac
atcacagtgtgggtggatgtgactgaggtggagctggcagaggagcaggccaaacaggag
gatcagatactcaagcagcaggagttgtccaacctgctccatgagaagaagtatcttaag
gccctaggtctcgccatcttgctggaccagcctcacactgtgctcactgtgatcaaagcg
atccgtcagggggaggacagacgcgagctgctggagaagacgctactgaaacttcgtgtg
gatcagaaagagtcactcctacgctactgtgtggtgtggaacaccaacgccagaaactgt
caggatgcccaggcagtcctacaggtgctcctgacacacctgccgcctgaggagctgctg
cagtaccagggcgcccgagcacacctggagggactcatcccatatacagagagacacatg
cagaggattggaaatttgctgcaggcatccatgtttctgaactacatgtggcagaagatg
agagtggccggggcaccatccagtatgggccaagatgaagaaatggacaccactcctctt
gccaaaccgttcttcatgattgacaaggagaaaggaaaggacagcggcgaggagaagcga
gacaccgggaatgacagcgatagtggacaagatgaagatccaaagtgccctgctgaagag
gaggaggaggacaacgacgatgaggtcagcgtcaccaagaaagcctccacaaccaacgcg
aggctagaaaacggagagagcaccaaaactaacggcaaccgccgctctgaaaatgaggag
agctcagaggaagaagacatggaggaagacgatcaaactaaggcgatgagacgtctccca
gtttcttcagctcctcagtgccagactctcgccagctga

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