KEGG   Lates calcarifer (barramundi perch): 108880596
Entry
108880596         CDS       T04895                                 
Name
(RefSeq) protein Tob1
  KO
K14443  protein Tob/BTG
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108880596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108880596
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108880596
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     108880596
SSDB
Motif
Pfam: BTG PAM2 SinI
Other DBs
NCBI-GeneID: 108880596
NCBI-ProteinID: XP_018527690
UniProt: A0A4W6DZN6
Position
LG11:12839165..12843125
AA seq 340 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEKAAKESGLDIEDVRNNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDSNES
GASNGGLDLDKEIKNSFNPDAQVFMPINEPVNGASPGSSSPSPPFGHSAAVSPTFMPRST
QPLTFTTATFAATKFGSTKMKSSGRNNNGGNNAANKVARTSPTNLGLNVNSLLKQKAIST
SMHSLYGLGLGAQQQQHQKPSALSPNAKEFVFPSLQGQGSQSALFPGDSSLSLSPLQYSN
AFDMFAAYGGLNDKSLMDGLNFSLNNMQYSNQQFQPVMAN
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcagcttgaaatccaagtagctctcaacttcatcatctcgtacctgtataacaagctg
ccgaggcgacgggtcaacattttcggcgaggagctggagcgccagctgaagcagaagtat
gagggacactggtaccctgacaagccatacaagggctcaggattcagatgcattcacgtg
ggggagaaggtggaccccgtggtggagaaggcagccaaagagagcgggctggacattgag
gatgtccgcaacaacctgccccaggaccttagtgtgtggattgacccctttgaggtgtcc
tatcagatcggggagaaagggcccgtcaaagtattgtacgttgatgacagcaacgaaagt
ggagctagtaatggcgggcttgatctggacaaggagatcaagaatagtttcaatcccgat
gcacaggtcttcatgcccatcaacgaacctgtgaacggcgcctctccgggctccagctcg
ccctctcctcctttcggccactcggcggcagtcagtcccaccttcatgccccgctccacg
cagcctttaaccttcacgacagcgacctttgccgccaccaagtttggctccactaagatg
aagagcagcggacgcaacaacaatggcggcaataatgctgcgaacaaggtggcgcgcacc
tctcccaccaacctgggcctgaatgtgaacagtctcctgaaacagaaagccatctccacc
tccatgcactctctgtacgggttgggacttggagcgcagcagcagcagcaccagaagccc
tcagccctgtcccccaatgccaaggagtttgtgttccccagcctgcagggccagggcagc
cagagtgctctctttcccggggacagctcgctcagcctcagcccgctgcagtacagcaat
gccttcgacatgtttgcggcctatggtggccttaacgacaagtcccttatggatggcttg
aatttcagcttgaacaacatgcagtattctaaccagcaattccagccagttatggccaac
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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