KEGG   Lates calcarifer (barramundi perch): 108881639
Entry
108881639         CDS       T04895                                 
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
  KO
K13200  spermatid perinuclear RNA-binding protein
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108881639
Spliceosome [BR:lcf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    108881639
SSDB
Motif
Pfam: DZF_C DZF_N dsrm Dicer_dsRBD NPIP
Other DBs
NCBI-GeneID: 108881639
NCBI-ProteinID: XP_018529217
UniProt: A0A4W6CRD6
Position
LG13:complement(25954063..26020188)
AA seq 678 aa
MRSFRSFANDDRHVMAKHASIYPAPEELEAVQTLVSTVEGALKKVSDWMDGLNKSSGKTS
ACSEAGDKAVEEDAAETKPDGTSVLCGVTRVGLVAKGLLIKGDMDLELVLMCREKPTKLL
LYTISANLPLQIQTMTEDKYEVRSSVPEAAIQVCSTKDPQLTLKITLSSLAMREEHSTTE
EEEGDQDVHKEKQRDDKEEEEEDVLDRHRCRAALAALRHAKWFQARVTDLKSCVIVLRIL
RDVCNRLPVWQPLKGWPLELICEKAIATCNRPLGPGEALRRVMECIASGILLPGGPGVHD
PCEREPTDVLSDLSAQQADAITHSAQHALRLLAFGQLYKVLNMDPLPASKPSPRLLEGCQ
KRLREDVGSDDRDFIKRMKVLDWRMTDPNHPMNALMRLNQIHPGLQYRLLSQSGPVHAPV
FTMSVEIQGTTYQATGNSKRTAKLQVALKALQALGYVLGSDGDVDSLSADEKSDGEGKND
RMSTSSSSTSITSSTDTQESRAPGPILTAGGKNPVMELNEKRRGLKYELISESGSSYDKR
FIIEVEVDKQVFRGTGPNKKVAKASAALAALNSLFSGSKSTTNKKKRPNPPPKRPVASVL
TLPALAARPPRVPVIPRAPYISTPPTHGYIPPGFGAPYGYSPAGALPAYGGLYIDSAYYQ
PQTIATPIIIHLGPQDLF
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgaggtcgttccgatcgtttgcaaacgacgaccgccatgtcatggccaagcacgccagc
atctatccggccccggaggagctggaggccgtgcagacgctggtgtccaccgtggaggga
gccctcaagaaagtctctgattggatggatggcctcaacaaatcctcagggaagacctcg
gcctgtagcgaggcgggggacaaggcggtggaggaagacgctgctgagacaaagcctgat
ggtacgtcagtgctgtgcggggtgacgcgtgtcggcctggtggccaaaggcctgctgatc
aaaggggacatggacctggaactggtgctgatgtgccgagagaaacccaccaaactgctg
ctgtacaccatcagcgccaacctgcccctgcagatccagacaatgacggaggacaaatac
gaggtgcggtcgagcgtgcctgaggcagctatccaggtctgcagcaccaaagacccccaa
ctcaccctgaagatcaccctctcctccttagccatgagggaggagcacagcaccacagaa
gaagaggagggcgatcaggacgtccacaaggagaagcagcgggacgacaaggaggaggag
gaggaggacgtcctggacaggcacaggtgccgggctgccctggctgcactccgacacgcc
aaatggttccaggccagagtcacagatcttaagtcctgcgtcatcgtcctgaggatcctc
agagacgtgtgcaacagactgcctgtgtggcagcctctcaaaggatggcctctggagctg
atctgtgaaaaggccatcgccacctgtaaccggccgctgggtccaggtgaggccctgcgt
cgcgtcatggagtgcatcgcctcagggattctcctgccgggaggtccgggagttcacgac
ccctgtgagagggaacctacagacgtcctgtctgacctcagcgcccagcaggccgacgcc
atcacacacagcgcgcagcatgcgttacgcctcctagcctttggacagctttacaaggtc
ttgaatatggatcctctccccgccagcaaaccctcaccaaggctgttagaaggttgtcag
aagaggcttcgggaggacgtcgggtcagatgacagagacttcatcaaaaggatgaaagtc
ctggactggaggatgacggatccaaaccaccccatgaacgctctgatgcgtctgaaccag
atccacccgggtcttcagtaccgcctgctgtcccagtctggcccagtccacgctccggtc
tttaccatgtccgtggagatccagggaaccacctaccaggccaccgggaactccaagaga
accgccaagctccaagtggccctcaaggcgctgcaggctctgggctacgtgctcggcagc
gacggagacgtggactcgctgagcgccgacgagaagtcagatggcgaaggcaagaacgac
aggatgtccaccagctccagctccacctccatcacctcctccacagacacacaggagtcc
agagctccaggtccgatcctgacggcgggaggtaaaaacccggtgatggagctgaatgag
aaacgccgtggcctcaaatacgagctgatatcggagagcggcagcagctacgacaaacgc
ttcatcatagaggtggaggtggacaagcaggtttttcggggaacgggtcccaataagaaa
gtagccaaagccagcgcagcgctagccgccctgaacagcctgttctccggctccaaatct
acgaccaacaagaagaaacgacccaatcctccaccaaagagacccgtggcctcggtgctg
accctcccggccctcgctgctagacctccacgggtccccgtcatccccagagctccctac
atcagcaccccacccacacatggatacatcccgccaggttttggtgctccttatggttac
agccctgcaggcgctctccctgcttacggtggcctgtacatcgacagtgcctattaccag
ccgcagaccatagccacacctataatcatccacctgggccctcaggatcttttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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