KEGG   Lates calcarifer (barramundi perch): 108881751
Entry
108881751         CDS       T04895                                 
Symbol
cldn5a
Name
(RefSeq) claudin 5a
  KO
K06087  claudin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04514  Cell adhesion molecules
lcf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108881751 (cldn5a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108881751 (cldn5a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lcf03037]
    108881751 (cldn5a)
   04147 Exosome [BR:lcf04147]
    108881751 (cldn5a)
Cilium and associated proteins [BR:lcf03037]
 Other cilia and associated proteins
  Stereociliary proteins
   108881751 (cldn5a)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   108881751 (cldn5a)
  Exosomal proteins of colorectal cancer cells
   108881751 (cldn5a)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like MFS_MOT1
Other DBs
NCBI-GeneID: 108881751
NCBI-ProteinID: XP_018529398
UniProt: A0A4W6C698
Position
LG13:4444925..4446887
AA seq 215 aa
MVSAGLEILGLSLCVIGSLLVMVACGLPMWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKVHDSVLALSHDLQAARALTIISSVMGVLGLMVVIAGAQCTNCIRTEYIKARVVNA
GGVIYIISGLFVLVPLCWMANNIISDFYNPQVPASKKREIGAALYIGWAATALLLIGGAL
LCCSCPSSGNSGYSVKYAPTKRATQNGDYDKRNYV
NT seq 648 nt   +upstreamnt  +downstreamnt
atggtgtcggccggactggagatcctgggactgtcgctgtgcgtaattggctcgctcctg
gtgatggttgcgtgcggactgcccatgtggaaggtgacggctttcatcgaggccaacatc
gtggtggctcagacgatctgggacggcttgtggatgtcgtgtgtggtgcagagcacgggc
cagatgcagtgcaaggtgcacgactcagtcctcgccctcagccacgacctacaagcggcc
agagcgctcaccatcatctcctcggtgatgggcgtgctggggctcatggtcgtgatcgcc
ggcgcgcagtgcactaactgcatccgcaccgagtacatcaaagcccgggtggtgaacgcc
ggaggggtcatctacatcatcagcggcctgttcgtgctggtgcctctctgctggatggcc
aacaacatcatatcggacttctacaacccgcaggtgcccgcatccaagaagagggagatc
ggcgctgcgctgtacatcggctgggcggccacggcgctgctactgatcggaggagcgctg
ctgtgctgctcctgtccctccagcgggaactcgggatactcagtaaaatacgcaccgacc
aagagagccacgcagaacggggactatgacaagaggaattatgtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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