KEGG   Lates calcarifer (barramundi perch): 108882476
Entry
108882476         CDS       T04895                                 
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
  KO
K17265  Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108882476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108882476
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108882476
Enzymes [BR:lcf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     108882476
    5.6.2.5  RNA 5'-3' helicase
     108882476
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108882476
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108882476
SSDB
Motif
Pfam: NTF2 RRM_1 RRM_7
Other DBs
NCBI-GeneID: 108882476
NCBI-ProteinID: XP_018530505
Position
Unknown
AA seq 496 aa
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPVEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDEEVEEIEERVPSPDVAPEESAPFYDPTACS
EPAVPGDEEEAAAESPEPEAEVEKEAEAAAVELKSESMLETQTDAHVADDQTEKSPAAAP
PTTEPTSAPAEPAPAAPEENRPFSWASVTSKNLPPSGAVPVSGIPPHVVKVTPTAPPRAE
VKPESQTTTQRPQRDQRPREQRPGGPPPVHRGPRPVREGEQGESEGRRVVRYPDAHQLFV
GNVPHDVDKSELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFRG
DVRLNVEEKKTRSAREGDRRDVRPRGPGGPGGPRERIGGGGGPRGPPTRGGMAQKPSFGS
GRGAGPSEGRYSAQRQ
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtattac
acactcctgaaccaggcccctgactacctgcacaggttctatggaaagaactcctcctac
gtgcacggcggcctggacagcaacggcaaaccagtggaggctgtttatggacagtcagag
attcataagagggtgatggctctgagtttccgtgactgtcacaccaagatcaggcacgtg
gacgcccacgccaccctgaacgagggcgtggtggtgcaggtgatgggggagctgtccaac
aacatgcagcccatgaggaagttcatgcagacgtttgttctggctcctgagggaactgtt
gcaaacaaattctacgtccacaacgacgtgtttcgttaccaagacgaggtgtttggagac
tctgactctgaacctccagaggagtctgatgaggaggtggaggagatcgaggagagggtc
ccctcgcctgacgtggctccagaggagtcggctcccttctacgacccgacagcctgttca
gagccggcggtccccggtgacgaggaggaagcggcagcagagagtcctgaaccagaggcc
gaggtggagaaggaggccgaggctgcggcggtggagctgaagtccgagtcgatgctggag
acgcaaacagacgcacacgtggccgacgaccagacagagaaaagccccgccgccgcccca
cccaccacagagcccacctccgcccctgccgaacccgcccccgccgccccagaggaaaac
aggccgttctcctgggcttcagttaccagtaagaacctccctcccagcggggccgtccca
gtctcaggaatccccccccacgtcgtcaaagtcactcccacagcaccgcccagagcagag
gtgaagccagagtcccagacaacaacacagagaccacagagagaccagaggccgagggaa
cagaggcctggaggtcctccgccggttcacagaggacccagaccagtacgagaaggtgag
cagggcgagtcggagggtcgcagggtggtcaggtaccccgacgcccaccagctcttcgtg
ggtaacgtcccgcacgacgtggacaagagcgaactcaaggagttctttgaacagtacggt
acagtcctggagctgaggatcaacagcggaggaaaacttccaaactttggcttcgtggtg
tttgacgactctgaacccgtacagaagatcctcagtaacaggcccatcaagttcagagga
gacgtccgcctgaacgtggaggagaagaagactcggtcagccagggagggcgacaggcgg
gatgtcaggccccggggtcccggaggtcccggcggtcccagagagcgaataggaggaggc
ggaggcccccgagggcccccgacccgaggaggcatggcacagaaacccagcttcggctcg
ggacggggcgccgggcccagcgagggccgctactcggcccagcgccagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (62)   

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