KEGG   Lates calcarifer (barramundi perch): 108883553
Entry
108883553         CDS       T04895                                 
Symbol
ticam1
Name
(RefSeq) TIR domain-containing adapter molecule 1
  KO
K05842  toll-like receptor adapter molecule 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04217  Necroptosis
lcf04620  Toll-like receptor signaling pathway
lcf04621  NOD-like receptor signaling pathway
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    108883553 (ticam1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108883553 (ticam1)
   04621 NOD-like receptor signaling pathway
    108883553 (ticam1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108883553 (ticam1)
SSDB
Motif
Pfam: TRIF-NTD TIR_2 CAP12-PCTIR_TIR
Other DBs
NCBI-GeneID: 108883553
NCBI-ProteinID: XP_018532364
UniProt: A0A4W6E8G6
Position
LG4:14427667..14431031
AA seq 573 aa
MSQEGEENQGTGLRDVFEILVKEPKERLQSLTILLGESPEDNIIHALCLIILQREVQALN
KLQTLKDNYLANHVAERWQMSGGKLEDFRVRCGQSQEFTGESLAALARIFKVLTERRLCE
PHLRNLAYQRALSTDSQKTSNCEDLEYDQLREEAKVVCGPQVEEWFSSPVDLKSGSYHDL
NSSMEDIRLTFRITDESERGNNLPSPLQASSSMPSYPTHLEISIPPTVSYQGDKVTPETS
DKSKSGQSQRSEEPQPKSNEPALPEAKKDSKTECRTLEETPNQTTKPFTEPKFALPTATM
ASKVSVPKEMHESKGAEEEEEEIFYAFVILHAPEDGDMAERIKERLESVTCCDGATFADD
FAIPGKSTLKSVEDAINNSAFTLLLLTCNFNTRMEEVEADSALINSINKKYKHNTVVPLL
PRENCMPKQNIPMILRTINPLEENKHFDKKAKQVLSPANIKRQKRFWTEGQRVKRQIETQ
DELKQLNQNQKLLIQETKLVQSLVRETQSLLLAQKCLLGPSVPPGQDGGEGGAGWQQQQQ
PNINIAHAKYIMIGSGSQMTVDHSGGPDKDEEQ
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgagtcaagagggagaagaaaatcaggggacaggactgagagatgtgtttgagatatta
gttaaagaacctaaggagcgactgcagagccttacaatcctgttgggtgagtctcctgaa
gataatatcatacacgccttgtgtctgatcattctccagagggaggtgcaggccctgaac
aaactccagacactgaaggataactaccttgccaaccatgtggctgaaaggtggcagatg
agtggaggtaaattagaagactttagagttcgttgtggtcaatctcaagagtttacagga
gaatctttggcagcgttggctcgcatttttaaagttttgaccgagcggaggctgtgtgaa
ccacatctgagaaatctggcgtatcagagagccctttccactgatagccaaaaaacaagc
aattgtgaggatctggaatatgatcagctcagagaagaagctaaagtcgtctgtgggcct
caggttgaagagtggttcagctctccagtagacctcaagtcagggtcttaccatgatctt
aatagcagcatggaggacatacgcttaactttcagaattacagatgagtcagagagaggt
aataatcttcccagccctctgcaggcgagctcctcaatgccctcataccctactcatcta
gagataagtatacctccaacagtttcatatcaaggggacaaagtaactcctgaaacatca
gataaatccaaatctgggcagtctcagcgatctgaggagcctcagcctaaatccaatgaa
cctgctctgcctgaagcaaagaaagactcaaagacggagtgcaggacattggaagagact
ccaaaccaaaccacaaaaccattcactgaaccaaaatttgcactacctactgcaacaatg
gcatccaaggtatcagttccaaaggaaatgcatgaaagtaaaggtgcagaagaggaggaa
gaggaaatattctatgcattcgtcatcctgcatgcaccagaggatggagatatggctgag
aggatcaaggaaagactagaatcggtcacttgctgtgacggcgcaaccttcgctgatgac
tttgccatccctggaaagagtactctgaagagtgtggaggatgctatcaacaactcagcc
ttcactctcctgctgctcacctgcaacttcaacactcgcatggaggaggttgaggcagac
tctgcccttataaactccataaacaagaaatacaaacacaacactgttgttcctttgctg
ccacgggagaactgcatgccaaaacagaacattcctatgattctgaggacaataaatcca
ctggaagagaacaagcactttgacaaaaaagcaaaacaggttttgtctccagctaatatt
aaaaggcaaaagagattctggactgagggacagagagtgaaacgacagatagagacacag
gatgaactaaaacaattaaaccaaaaccaaaagctattgatccaagagactaaattagtg
caatcactggtcagagagacccagagccttttactggcacaaaaatgtcttcttggtccc
agtgtcccaccaggacaggatggtggtgaaggcggggcagggtggcaacagcaacaacaa
ccaaacattaatattgcacatgctaaatatataatgattggtagtggctctcaaatgact
gtggatcacagtggaggcccagacaaagatgaggaacaataa

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Ontology (1)   
   KEGG BRITE (1)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (26)   

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