KEGG   Lates calcarifer (barramundi perch): 108884542
Entry
108884542         CDS       T04895                                 
Name
(RefSeq) integrin alpha-L
  KO
K05718  integrin alpha L
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04514  Cell adhesion molecules
lcf04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108884542
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    108884542
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108884542
   04515 Cell adhesion molecules [BR:lcf04515]
    108884542
   04090 CD molecules [BR:lcf04090]
    108884542
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108884542
Cell adhesion molecules [BR:lcf04515]
 Integrins
  Integrin alpha subunits
   108884542
CD molecules [BR:lcf04090]
 Proteins
  108884542
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_1 VWA_2 FG-GAP_3 FG-GAP_2
Other DBs
NCBI-GeneID: 108884542
NCBI-ProteinID: XP_050926831
Position
LG5:27031211..27045589
AA seq 744 aa
MEKMHVKNPIMWLTYTVAFVISVSLAFNIDTTTPHISTMEQTDFSRSKLFQFMSGKNKGI
HVTAPQQLNAPEDMCKSDLNQTHQCLIIPEMSLTDTTIPVKHLRLSIPEDSTDSQFTVCS
SRVVHEYDENSYVNSVCYKLTENARKTVDLVFLFDGSASMSEDEFMKNKDFIVDIMTTFQ
NTSIKFAAVQFSSNYKKVFDFNDYQHGPALEKLRKEPQMKSLTYTHKALSFTLEHILEKP
DAGASPDATKVLVLITDGDPSDTDRNGIIKRYKEKKIIRFVIGVRAAKLDKFTAIASEPT
DKYAFQIEDYNGLKGILENFQNRISTMEGSWDMTSEMAQSGFSAVFYRENLILGSVGSNS
WRGSLQELHEQNKTQTDQRSQNDYMGYSVSVGEMNKAPLYFTGAPRFNHTGQVVLFVHNG
EYWITAQTLTGHQIGSYFGAELCSVDINSDNNTDFLLVGAPLFYQPQEKREGQIYVYTMT
DEMQLKNELSVTVPSMGRFGTTIASLADLNGDGLRDIAVGAPMEDDNRGAVYIYLGDKHQ
GIRSTFSQRIMGQKIKSGLRFFGRVIDGDIDLGEDGLPRILIGSQETAVVLRSRPVFNVF
PQLYFQPEEISTEKIDCLSNTDESVPMVTLIVCFEMVETTKSKAGTVNPELNISYTLEVD
PMRQTYRGFFSPTDREARNLTSTHELKDKETFFNFTIYMAKCVEDTLSPISVRLNFFQVD
SESASAVLNMDSQWQAAAEVPFKK
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggaaaagatgcatgtgaagaatcccatcatgtggctcacctacacggtagcttttgtt
atctctgtatctttggctttcaacattgatacaacaaccccccacatctctactatggaa
caaacagatttctccagaagcaaattgtttcaattcatgtctggcaaaaacaaagggata
catgtcactgcaccacagcagctaaacgcaccagaggatatgtgcaaatctgatctaaac
cagactcaccagtgcctcattattccagaaatgtctctcacagacacaacaatacctgtc
aagcacttaagactgtcaatacctgaagactccacagattcccaattcactgtttgcagc
tccagggtggttcatgaatatgatgagaactcctatgtaaacagtgtgtgttacaagttg
acagaaaatgcaagaaagacagtggaccttgtctttctttttgatggatcagcgagtatg
tctgaagatgagttcatgaaaaataaagatttcatagtggacataatgacaacctttcag
aacacatcaatcaagtttgcagcagttcagttctcctcaaattacaagaaggtttttgac
ttcaatgactatcaacatggtcctgctcttgaaaaacttaggaaagaaccccagatgaag
agtctcacctacacacataaagccctcagttttacattggagcatattttggaaaagcca
gatgcaggcgcctctcctgatgcaaccaaagtcctggtactgatcacagatggagatccc
agtgatacggacagaaatgggattattaaaagatataaagaaaaaaaaatcattcgcttt
gtcattggggtcagagctgccaagctggataaatttacggccattgcctcagaaccgaca
gataaatatgccttccaaatcgaggactataatggactcaaaggaatactggaaaacttt
caaaacaggatctctacaatggaaggatcctgggacatgactagtgaaatggctcagagt
ggattcagtgctgtcttctacagggagaacttgatcctgggttcagtgggatcaaacagc
tggcggggctctctccaagaactccatgaacaaaacaaaacgcaaactgatcagcgctcg
cagaatgactatatggggtactctgtttctgttggagagatgaataaggctcctctctac
ttcacgggcgcaccaagatttaaccacacaggacaggtcgtactttttgtacataatggt
gaatactggatcacagcccaaacactgactggacaccagatcggttcctactttggtgca
gagctgtgctcagtagatatcaactccgataataacactgacttcctgctggtgggagcg
ccactgttttaccagcctcaggagaagagagaaggccagatctacgtctacacaatgact
gatgagatgcaactgaaaaatgaattgagtgtgacagtgccatccatgggtagatttggc
accaccatagccagcctcgcagatctgaacggagatggactccgagacattgctgttgga
gcccccatggaggatgataacaggggagctgtgtacatctacctcggtgacaaacaccaa
gggatacgcagcactttcagccagagaatcatggggcagaaaataaaatctgggctgaga
ttctttggacgggtcattgatggggacatcgaccttggagaggatggacttccacgtatt
ctgattggatcacaggaaacagctgttgtcttaaggtccaggcctgtctttaatgtcttc
ccacaactgtattttcaacctgaggagatcagcactgagaaaattgactgcttaagcaac
acagatgaaagtgtacctatggttaccttgatagtctgctttgaaatggttgaaacaaca
aagagcaaagcagggacagtgaaccctgaactgaacatctcatacacgctagaggtggat
ccaatgagacaaacttatcgaggtttcttcagtccaactgatagagaagctaggaatctt
acttctacccacgaactgaaggataaagagacattcttcaatttcaccatctacatggct
aaatgtgtggaagacacattatcgcccatcagtgtcagactaaacttcttccaagttgac
agcgagagtgcgagtgccgtcttgaacatggacagccaatggcaggctgctgctgaggtt
ccatttaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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