KEGG   Lates calcarifer (barramundi perch): 108885111
Entry
108885111         CDS       T04895                                 
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
  KO
K04256  c-opsin
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108885111 (tmtopsb)
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:lcf04030]
    108885111 (tmtopsb)
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108885111 (tmtopsb)
G protein-coupled receptors [BR:lcf04030]
 Rhodopsin family
  Vision
   Opsin
    108885111 (tmtopsb)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srx 7TM_GPCR_Srsx 7TM_GPCR_Srv 7TM_GPCR_Srw DUF2189
Other DBs
NCBI-GeneID: 108885111
NCBI-ProteinID: XP_018534825
UniProt: A0A4W6BPZ5
Position
LG24:complement(16677233..16700705)
AA seq 416 aa
MIVSNVSLSCAHCSGGGVGDSAATAVTDAYGEVSGALPPLSLSPTGHLVVAVCLGFIGTF
GFLSNFLVLTLFCRYRVLRTPMNLLLVSISASDLLVSVLGTPFSFAASTQGRWLIGRAGC
VWYGFVNACLGIVSLISLAVLSYERYCTMMSPTMADGRDYRPALGGICFSWLYSVAWTVP
PLLGWSKYGPEGPGTTCSVDWKTQTPNNISYIICLFTFCLVLPFGVILYSYGKLLHAIRQ
VRSVSSVVTRRREQRVLVMVITMVVCYLVCWLPYGAAALLATFGPPDLLTPEASITPSLL
AKFSTVINPFIYIFMNKQFYRCFRAFLSCSVPERGSTLKTFSRATKTLRTIRQEKEHHVS
DPAPSTALPTPNSIHGSSQGASHMTPPLSNPDSAAPHSPATNSPKPKLILVAHYRE
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgatcgtttccaacgtgagcctaagctgtgcgcactgttccgggggaggagtcggcgac
tcggcggcgactgcggtgacagacgcgtacggagaggtgtccggcgctctccctcctctg
tccctgagcccgacggggcacctggtggtggcggtgtgcctcggcttcatcggcaccttc
ggtttcctcagtaacttcctggtgctcacgctgttctgccggtaccgggttttgcgcacg
cccatgaaccttctgctggtgagcatctcagcgagcgacctgctcgtcagcgtgctgggt
accccgttcagcttcgcggccagcacccaggggcggtggctgatcggacgcgctggttgc
gtctggtacgggttcgtaaacgcatgtttgggcatcgtctctctgatatccctggccgtt
ctgtcgtatgagcgctactgcaccatgatgtcgcccactatggccgacggcagggactac
cgcccggcactgggagggatctgcttctcctggctctactctgtggcctggactgttccc
ccactgctgggctggagcaagtatggacccgagggtcccggcaccacctgctcggttgac
tggaagacccagacgccaaacaatatctcctacatcatctgcctgtttaccttctgcctg
gtcctgccattcggcgtcatcctctactcctacggcaagcttctgcacgccatcagacag
gtccgcagtgtgagttcagtggtaactcgtcgcagagagcagcgggtgctggtgatggtc
atcaccatggtggtgtgctacctggtctgctggctgccgtacggggctgcggctctgctc
gcgacctttgggccccctgaccttttaactccagaggcaagcatcacgccatcactgctg
gccaagttctccaccgtcatcaaccctttcatctatatattcatgaacaaacagttctac
aggtgtttcagagcattcctcagctgctctgtccccgagcgaggctccaccttaaagacg
ttttcacgggcgaccaagacactccgcaccatccgccaggagaaggaacaccacgtgtcc
gatccagccccctccacagccctgcccacgcccaactccatacatgggtcctcccaggga
gccagtcacatgactccacctctgtccaatccagattctgccgctccccactcccctgcc
accaacagccccaaacctaaactgattctggtggctcactacagggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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