KEGG   Lates calcarifer (barramundi perch): 108885295
Entry
108885295         CDS       T04895                                 
Name
(RefSeq) RE1-silencing transcription factor
  KO
K09222  RE1-silencing transcription factor
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108885295
   03036 Chromosome and associated proteins [BR:lcf03036]
    108885295
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    108885295
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     108885295
SSDB
Motif
Pfam: zf-H2C2_2 zf-H2C2_5 zf-C2H2 zf-C2H2_4 Nairovirus_NSm
Other DBs
NCBI-GeneID: 108885295
NCBI-ProteinID: XP_018535100
UniProt: A0A4W6CEN6
Position
LG8:23852987..23860413
AA seq 997 aa
MSAQTVFSVEMFPVGVSLMEDGQSLNDMPRNTLPAPQLVMLANVAAVTASEGGSGGCDGS
AADEKEMMELKTVGCSYSDSEDESIIRYSYDNQNHREVCIIEYPESPGPSIKAVVVGNNA
EEEEEDDGDKAEDLSRRPQTRPSTATKTQVAKRKDSPPAAVTESTKKKKPFHCKPCHFQA
QNEQEFVEHLSTHSISKMMVVNRVEGRSKTKTKEAETPESQAPSGGEGDGSGEAGATATT
GDIKGLIRCERCGYNTNRYDHYIAHLKHHSKEGEDHRVFKCTLCPYTTVSQYHWRKHLRN
HFPSKLHTCSQCSYFSDRKSNYIQHIRTHTGVRPFQCLYCDYSSSQKTHLTRHMRTHSGE
RPFKCESCNYLAANQHEVTRHARQVHNGPKPLSCPYCDYKTADRSNFKKHVELHLNPRQF
LCPLCKYAASKKCNLQYHIKSRHSGCNVSVDVSKVKLRVKKPGPDGAEENSDSRASKLDN
SSSIEEDFDMDDGDEHEAVDSSPINLSIRKSSRPSVAQPSQSETPDKAQKKSSATSEKEK
LPKLKDKIEPEKKVTTRQKKAEKVNENPAENTTVKETQAETITAAVNTDTKVKRRVKKLP
AEKQTVQDQAEVPESQKDQMETEKSDQQKSKEERIVRQKVTKEEGKLRPEKEKEQQKNDS
SGKENKSINKPRKYGSRKSEKITEPVEEAQQKPESHEKNQKEKVVKEKPSKRKAVEALDL
SQKCSSETPSKARRLKATSAEKVQSKLASEDKSNDATPIQQKSNGTTPVKQKKTRSSNKK
AAGLQQAVDPAKDKTRSVTSLTTEAPEASVQLDNSKQTTNSEHQPTENSPAQKKTFTDDT
VSAVPEKTLDKPSEKMDVSPSCSSGEDTPSSAEDRPAPTFLKPTSPPSLVLPSQRIKPAD
PEDDEGIHSSHEGGSDISDSASEGSDDSGLNGNGSGSGKMANDPETPTDEIPTPTELKSH
MCIFCDRTFPLEAEYRRHLNRHLVNVYYMDNTTKGQK
NT seq 2994 nt   +upstreamnt  +downstreamnt
atgtccgctcagactgtgttttcggtggagatgtttcctgtgggtgtttctctgatggag
gacggtcaaagtctgaacgacatgcccaggaacacgctgcccgcccctcagctggtgatg
ctagccaacgtggcagcggtgacggcgtcggagggtggcagcggtggctgtgatggcagc
gcagccgacgagaaggagatgatggagctgaagacggtgggatgcagctactcggacagc
gaggacgagagcatcatcaggtacagctatgacaaccagaaccacagagaggtctgtatc
atcgagtatccagagtctccaggcccaagcatcaaggctgtggttgtcggtaacaatgca
gaggaggaagaggaggacgatggggacaaagctgaagacctgtcccgccgccctcaaacc
cgtccctccaccgccactaaaacacaggttgccaaacgtaaagacagtccccccgctgct
gtgacggagagcaccaagaagaagaaacctttccactgtaaaccatgtcacttccaggct
cagaacgagcaggagttcgtagaacatctcagcacccacagcatcagcaagatgatggtg
gtgaaccgggtggaggggcgcagcaagaccaagaccaaggaggcagaaacacctgagtcc
caggctccttcaggtggggagggggatggtagcggggaggcaggagccacagcgacaaca
ggtgacatcaaagggctgatcaggtgtgaacggtgcggatacaacaccaacagatacgac
cattacatcgcccacctgaaacaccacagcaaggagggagaggatcacagggtgtttaag
tgcactctgtgtccatacaccaccgtaagtcaataccactggaggaaacatttgaggaat
cacttccccagcaaactgcacacctgcagccagtgctcctacttctccgaccgcaagagc
aactacatccaacacatccggacgcacacaggtgtgcgtcctttccagtgtctgtactgt
gactactccagttcacagaaaacccacctgacccgacacatgaggactcactcaggtgag
cgtcccttcaagtgtgagagctgtaactacctggcagccaatcagcatgaggtgacccgc
cacgcccggcaggtccacaatggccccaaacctctttcctgcccctactgcgactacaag
accgcagaccgcagcaactttaaaaagcatgttgaactccacctcaaccctcgccagttc
ctctgtccgctctgcaagtacgctgcctccaagaaatgcaacctgcagtaccacatcaag
tccaggcactctggatgcaacgtctccgtggatgtctctaaagtcaaactgcgtgtcaag
aaacccggtcctgatggtgcagaggaaaattcagactccagagcaagcaagcttgacaac
tcatccagcatcgaggaggactttgacatggacgacggggacgagcatgaggctgtggac
tcgagccccatcaatttgtcaatcagaaagagcagcaggcctagtgttgctcaaccttca
cagagtgaaacaccggacaaggctcagaagaaatccagcgccacttctgagaaagagaaa
ctaccgaagctgaaggacaagattgaaccagagaaaaaggtcacaacaaggcagaagaag
gctgagaaggtcaacgagaatcctgcagagaacacaactgttaaagaaacccaggctgag
acgataacagctgctgtaaatacagacaccaaggtgaagagacgagtcaagaagctacca
gcagaaaaacagactgtccaggaccaagcagaagtgcctgaatcccaaaaagaccaaatg
gagacagagaaatctgaccaacaaaaatccaaggaggagagaatagtgaggcagaaagtg
acaaaggaggaagggaaattaaggcctgagaaggaaaaagaacagcagaagaatgatagc
agtggaaaggagaacaaaagcatcaacaagcccaggaagtatggatcaaggaagtcagag
aaaattacagaacctgttgaggaagctcagcagaaaccagaaagtcatgagaaaaatcaa
aaggaaaaggtggttaaagaaaagccctcaaagaggaaagcagtggaggcattagatctt
tcccaaaagtgctcatctgagacgccatccaaagccagacgactgaaagccacatctgct
gagaaggtgcagtcaaaacttgcttcagaagacaagtcaaatgatgccactccaattcag
caaaagtccaatgggacaacaccagtaaagcagaagaagaccaggagctccaacaagaaa
gccgcaggccttcaacaagctgtggatccagctaaagacaagacaaggtcagtcaccagt
ctgaccacagaggctccagaagcatccgttcagctggacaactcaaagcaaaccacaaac
tctgagcaccagccaacagaaaacagcccagcacagaagaagaccttcacagacgacaca
gtctcagctgtgccagaaaagactctggacaaaccttcagagaagatggatgtttcaccc
tcctgcagctcaggtgaggacacaccctcttcagctgaagaccggcctgctccaaccttc
ctaaaacccacatcaccaccttctctggtgcttccaagtcagcgaatcaaacccgctgac
ccagaggacgacgaagggatccacagcagtcacgaagggggaagtgacatcagcgacagc
gcctctgagggcagcgacgactctggcctcaatggcaatggcagtgggtcgggtaagatg
gccaacgaccccgaaacgcctactgacgagatcccaacaccaacggagctcaagagtcac
atgtgcatcttctgtgaccgtacgttccccttggaggcggagtaccgccgtcacctgaac
cgtcacctcgtcaacgtctattacatggacaacaccactaaaggacagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (81)   

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