KEGG   Lates calcarifer (barramundi perch): 108885437
Entry
108885437         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: complement C3-like
  KO
K03990  complement component 3
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04080  Neuroactive ligand-receptor interaction
lcf04145  Phagosome
lcf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108885437
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108885437
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108885437
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108885437
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108885437
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108885437
Peptidases and inhibitors [BR:lcf01002]
 Peptidase inhibitors
  Family I39: alpha2M family
   108885437
Membrane trafficking [BR:lcf04131]
 Endocytosis
  Phagocytosis
   Opsonins
    108885437
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   108885437
SSDB
Motif
Pfam: TED_complement A2M_BRD MG1 NTR A2M_recep A2M MG4 MG3 MG2 ANATO C3_CUB2 Transglut_C C3_CUB1
Other DBs
NCBI-GeneID: 108885437
NCBI-ProteinID: XP_018535312
Position
LG5:complement(21803912..21820108)
AA seq 1656 aa
MSRTPLWLLASLAFASLTSLADGSPLKVMSSPNLLRVGTAENIFVECQDCSGGDIKVDIN
VMNHPTKTTKLASATVTLNTANEFQALGQVTIPPGDFSKDPNLKQYVYVQAQFPDRLLEK
VVLVSFQSGYIFIQTDKTLYTPNSKVHYRMFALTPRMEPVERDDTTDASIAIEIMTPDGI
ILPLDPVSLKSGIHSGDYQLAEIVSPGLWKVVAKFHSNPQQSYTAEFEVKEYVLPSFEVK
LTPMSPFFYVDSQDLTVNIKATYLFGEEVDGTAYVVFGVVHERQKRSFPSSLQRVPIVTG
EGQVTLKREHITQTFQQINQLVGSSIFVAVSVLTESGSEMVEAELRGIQIVTSPYTIHFK
KTPKYFKPGMSFDVSIEVVNPDESPAQGIAVVVDPGMVRGFTAANGMAKLTINTVAGEQR
LTITAKTSDPQISANRQASATMVALPYQTKSDNYIHIGVDTAELQLGDNLKINLNLKRQS
NDNTDITYLILSRGQLVKHGRYKTRGQVLISLIIPITKEMLPSFRIIAYYHTTGNEVVSD
SVWVDVKDSCMGSLTLESSRPAPSYEPRRMFGLKVTGDPGATVGLVAVDKGVYVLNNKHR
LTQKKVWDIVEKYDTGCTPGGGKDGMGVFFDAGLVFESSTASGTPYRQELKCPAPSRKKR
ASTITEVTSTLVSRYTDELQRDCCRDGMRETPLSYTCEIRSEYISDGAACVEAFLHCCKE
MESQRADKKEESLKLARSEDDDNSYMDSNEIVSRTKFPESWLWSDITLPACPRQTPNCDS
TSLVKNVPLQDSITTWQFTGVSLSRTHGICVGDPLEVIVRKEFFIDLRLPYSAVRGEQLE
IKAILHNYSPDHATVRVDLIETEDVCSAASKHSRYRQEVRVGPSTTRSVPFIIIPMREGQ
FRIEVKAAVKDSSLNDGIMKMLRVVPEGVLVKQPKIVTLDPVHKGQGGKQEEILNSAIPK
KDLVPNSPTSTQISVTGREQVAPLVENAINAKSMDTLIQQPSGCGEQNMIRMTLPVIATI
YLDKTNQWETVGFQKRAEALQHIKTGYQNQLAYRKKDGSFAVWANREGSTWLTAYVVKVF
AMANEKVAVQSDVVCDAVKFLILKAQQPDGLFREVGRVSHGEMIGDVRGTDSDASMTAFC
LIAMQESRRLCANTVNSLPGSIDKAAAYLEKRLPTITNPYAVAMTSYALANEGKLNRDIL
YNFASTELSHWPVPKGRVYQLEATAYALLALVKTEAFEDARPIVRWFNQQQKVGGGYGST
QATIIVYQAVAEYWASAKEPDYDLNVDILLPGRAKPDKYNINRNNRFATRTSKINDINQD
VKVTATGAGEATVTMVSLYYALPKEKESDCEKFNMTVELIPDKMDEDEKIYKLKIRVLYK
DKDHDATMSILDIGLLTGYTVNTNDLDLLAKGRARTIAKYEMNTALSERGSLIIYLDKVS
HTRPEEITFRIHQKLKVGILQPAAVSVYEYYDQTRCMKFYHPQRRGGQLLRLCRNDECTC
AEENCSMQKKGKITNDQRTAKSCESTPTSKIDYVYKVRLDGFTDGTSTDIYTMRVLEVIK
EGSSDVGPLGKLRTFLSYQHCREALDLQKGKTYLLMGTSKDIHRDDENQSFQYVLGERTW
VEYWPTEAECQADEHRPTCLGMEEMVQQYALFGCQQ
NT seq 4971 nt   +upstreamnt  +downstreamnt
atgagtaggactccgctgtggctgctggcctctctggcctttgcctctctaacttctctg
gctgatggatctccactgaaggtgatgtcttcccccaacttgctgcgtgtaggaacagca
gaaaacatctttgttgagtgtcaagactgttctggaggagacataaaggttgatatcaat
gtgatgaaccatccaaccaaaaccacaaagctggcatccgcaactgtgacccttaacact
gcaaacgagttccaggcacttggacaagtaacgatccccccgggagacttcagcaaggat
cccaacctgaagcagtatgtctatgttcaagctcagttccctgaccgacttctggagaaa
gtggtcttagtgtccttccagtctggctacatcttcatccagactgacaagaccctctac
acccccaacagcaaagttcattacaggatgtttgcattgacaccacgcatggagcccgtg
gagagagatgacacaactgatgcctctattgccattgagattatgactcctgatggcatc
attttacctcttgatccagtctctctgaaatcagggatccactctggagattaccaactc
gctgaaattgtcagtcctggactgtggaaagtggtggccaagttccacagcaacccacag
cagagctacactgcagagtttgaggtcaaagaatatgtgttgcccagttttgaggtgaag
ctgacacctatgagtcccttcttctacgtggacagtcaagacctcactgtcaacatcaaa
gctacgtatctgtttggtgaagaggttgatgggacagcatatgtggtatttggagttgta
catgagcgtcaaaagaggagctttccaagctcacttcagagagtgccgattgtgacaggt
gaaggacaggtcacactgaagagagagcacatcacacagaccttccaacaaatcaaccag
ctggtcgggagctccatatttgtagctgtcagtgtgttaacggagagcggtagtgagatg
gtggaggcagagttgagaggtatccagattgtcacatcaccctataccatccacttcaag
aaaacgcccaaatatttcaaaccagggatgtccttcgatgtttcgattgaagttgtgaat
ccagatgaatcaccggcacaaggtattgccgtggtggtagatccaggcatggtgcggggt
ttcaccgcagctaatggcatggcaaagcttaccatcaatacagtggcaggagagcaaagg
ttgacaatcactgcaaagaccagtgatcctcaaatttcagctaacagacaagcatcagcc
accatggtagctctcccataccaaactaagagtgacaactacatccacataggagtggat
acagcagagctgcaattaggagacaacctgaaaatcaacctcaacctcaagaggcagtca
aatgacaacactgatatcacatacctgatcctgagcaggggccaactggtcaaacatggc
cgatacaagacaagaggccaagtactgatatctctaataattcccatcaccaaagaaatg
ctgccatcgttccgcatcatcgcctactaccatacaactggcaatgaagtggtatcagac
tctgtttgggtggatgtcaaggactcttgcatgggctcgctgacgttggaatcatcgaga
cctgctccgtcttatgagcctcgcaggatgtttggtctgaaggtcactggagatccaggg
gccacagtgggactggtggcagttgacaaaggcgtctacgtcctgaataacaagcaccgc
ctcacccagaagaaggtgtgggacattgtggagaaatatgacacaggctgcacaccaggt
ggagggaaggacggtatgggtgtgttcttcgatgccgggctggtgtttgagtccagcact
gcttctgggactccctacagacaagaattgaaatgtccagcgcccagcaggaagaaacga
gccagcactataacagaggtcacaagcaccttggtgagtcgatatacagatgaactacaa
cgtgactgctgtagggatggaatgagggaaacccctctttcatacacttgtgagatacgc
agtgagtacatctccgacggcgcagcctgtgtcgaagccttcctgcactgctgcaaggag
atggaaagccagcgggctgacaagaaggaggaaagcctcaaacttgctcgcagcgaggac
gatgacaacagttacatggacagcaatgaaattgtgtctcgcaccaagttccctgagagt
tggctgtggtcagacatcacactgcctgcttgcccgcgtcaaacacccaactgtgattcc
acatcacttgtgaaaaatgttcctttgcaagactcaatcacaacctggcagttcactggc
gtcagtctgtcaagaacccacggaatctgtgttggcgatccattagaagtgattgtccgg
aaggaattcttcattgatctcagactgccctactctgctgtccgtggagagcagttggaa
attaaggcaatcctccacaactacagccctgatcatgccactgtgcgtgtggatctgatt
gagacagaggatgtgtgcagtgcagcttctaaacattcacggtatcgtcaggaggtcaga
gttgggcccagcactacccgatcggttccctttattattattcctatgagggaaggacag
ttccgcattgaggtcaaagcagctgttaaagactcatcgctcaatgatggaatcatgaag
atgctgcgggtggtgcctgaaggcgtactggttaaacaaccaaaaattgttactctagac
cctgttcataaaggccaaggtggtaaacaagaagaaattttgaacagtgcaattccaaag
aaagatttggttccaaactcacctacaagcacacagatctctgtgacagggagggaacaa
gtggccccactggtggagaatgccattaatgcgaaatcaatggatacgctcatccaacag
ccctcaggttgtggagagcagaacatgatcagaatgaccctgcccgtcattgcaaccata
tatttggacaaaaccaaccagtgggaaactgtgggctttcagaagagggccgaagccctc
cagcacatcaagactggctaccagaaccagcttgcctaccgtaaaaaggatgggtctttt
gctgtatgggccaatcgcgaaggtagcacctggttgacagcttatgttgtcaaggtgttt
gccatggccaacgaaaaggtggcggtgcaaagtgacgtggtctgtgacgctgtcaagttt
ctgattctcaaagcacagcaacctgatggcttgttcagagaagttggacgggtgtcccac
ggagagatgatcggtgatgtgcgtggcacagattcagatgcctccatgacagccttctgc
cttatcgccatgcaggagtcgcgcagactgtgcgctaacactgttaatagtctgccaggc
agtatagacaaagcagcggcctacctggagaagcgtctgcccaccatcaccaacccatat
gctgttgccatgacatcatacgccctggccaatgaaggaaaactgaaccgagacatcctc
tacaactttgcttctacagagttgtcccactggcctgtacctaagggacgtgtttaccaa
ctggaggccacagcttatgctcttcttgctctggtcaagaccgaggcctttgaggatgcc
agacctattgtgagatggttcaaccaacagcagaaggtgggcggaggctatggatcaact
caggctaccataatagtgtaccaggctgtagcagagtactgggccagtgctaaggaacca
gattatgacctgaatgtggacatcttgttgccgggcagggcaaagcctgataagtacaac
atcaacaggaataatcgctttgccacaagaacgtctaaaatcaatgatataaaccaggat
gtgaaagtgactgccacaggagcaggagaagcaacagtgacaatggtgtcgttgtactac
gctctgcctaaagagaaggagagcgactgtgagaagtttaacatgacagtggagctcatc
ccagacaaaatggatgaggatgagaagatttacaagctgaaaataagggttttgtataag
gacaaggaccatgacgcaactatgtcaatcttggatatcggcctgctaactggctacacc
gttaacacaaatgatctggacttattggccaaaggacgagcccgcaccattgcaaaatat
gagatgaacacagccctgtcagagagaggctctctgatcatttacctggacaaggtttct
cacacacgaccagaggagatcacattcaggatccatcagaagctgaaagtgggcatttta
caaccagcagctgtgtctgtctatgaatattatgaccaaacacgttgtatgaaattctac
catccacagaggagaggtggacagctactgaggctctgtagaaatgatgaatgcacgtgt
gctgaagagaactgcagtatgcagaagaagggcaaaatcaccaatgatcagcgcacagct
aaatcttgtgagagtacaccgaccagcaaaatagattatgtgtacaaagtgagactggac
ggatttacagacggcacatcaactgacatttacacaatgcgagtgctggaagtcatcaag
gaaggaagttctgatgtgggtcctctgggtaaacttcgcacattcctcagttaccagcac
tgcagggaggctttagatctgcagaagggcaaaacctaccttctcatgggcacgtccaaa
gatattcacagagacgatgaaaatcaatcatttcagtacgtgcttggtgagagaacctgg
gttgagtactggcccacagaggcagagtgtcaagctgacgaacacagacctacttgcttg
ggcatggaggagatggtccagcagtacgcactctttggatgtcagcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (63)   

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