KEGG   Lates calcarifer (barramundi perch): 108885656
Entry
108885656         CDS       T04895                                 
Name
(RefSeq) succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial
  KO
K01900  succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00020  Citrate cycle (TCA cycle)
lcf00640  Propanoate metabolism
lcf01100  Metabolic pathways
lcf01200  Carbon metabolism
Module
lcf_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lcf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    108885656
   00640 Propanoate metabolism
    108885656
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108885656
Enzymes [BR:lcf01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.4  succinate---CoA ligase (GDP-forming)
     108885656
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     108885656
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108885656
SSDB
Motif
Pfam: ATP-grasp_2 Ligase_CoA ATP-grasp_5 GARS_A ATP-grasp DUF3141
Other DBs
NCBI-GeneID: 108885656
NCBI-ProteinID: XP_018535616
Position
LG12:15891074..15977084
AA seq 431 aa
MAASMASQAAARGLRTATSKNILLDKLKCTWLSPRRWLNLQEYQSKKLMQESGVAVQRFY
VADTASEALEAAKRLNAKEIVLKAQILAGGRGKGVFDSGLKGGVHLTKDPAVVGELANKM
LGFNLTTKQTPKDGVKVKTVMVAEALDISRETYFAILMDRSCNGPVMVGSPQGGMDIEEV
AASTPELIFKEAIDIFEGVRDDQALRMAANLGFKGPLQRQAADQIKRLYDLFLKVDATQV
EVNPLGETPEGQVVCFDAKINFDDNAEFRQKAVFAMDDMTESDPTEMQAAKWDLKYIGLD
GNIACFVNGAGLAMATCDIIDLHGGKPANFLDLGGGVKERQVYEAFKLLTADPKVEAILV
NIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAKRILTESGLPITAADNLDD
AAKKAVAAIRK
NT seq 1296 nt   +upstreamnt  +downstreamnt
atggcggcatccatggcatctcaggctgcagcaagaggactgaggacagccacctcaaag
aacattcttcttgacaaactcaagtgcacctggttgagtcccaggagatggctgaatctg
caagagtaccagagcaagaagctgatgcaagagagtggcgtggctgtccagcgcttctat
gtggccgacacagcttctgaagcactggaggctgcaaagagactgaatgccaaggagatc
gtgttgaaagctcagattctggcgggcggcagaggcaagggtgtgtttgacagtggcctt
aaaggtggagtgcacttgactaaggatcctgcagtggttggcgagctggccaataagatg
ctgggtttcaacctgacaaccaagcagacacctaaagatggagtgaaagtgaaaacggtg
atggttgcagaggccctggacattagcagggagacgtactttgccatcttaatggaccgg
tcctgtaatggtcctgtcatggttggaagcccccagggaggtatggatatcgaggaggtg
gccgccagcaccccagaactcatctttaaggaagccatagatatatttgaaggagtgcga
gacgaccaggcgctccgcatggcagctaatttgggtttcaaaggacctctgcagagacag
gcagcagatcagattaagaggctctatgatctgttcctgaaagtcgacgccactcaagtc
gaagtcaatcctctcggagagactcccgaaggacaagtggtttgctttgatgccaagatc
aacttcgacgacaacgctgagttccgtcagaaggccgtgtttgccatggacgacatgact
gagagcgaccccacagaaatgcaggcagccaagtgggacctcaaatatattggacttgat
ggaaacattgcctgttttgtgaatggagcgggcttggccatggccacatgtgacatcatt
gacctgcatggaggaaagccagctaacttcctggacctgggtggaggagtcaaagagagg
caggtgtatgaggcctttaagctgctcacagctgatcctaaggtggaggccatcctggtc
aacatctttggtgggatcgtcaactgtgccatcatcgccaacggcatcaccaaggcctgt
cgtgagctggagctgaaggtgccattggtggtcaggcttgaagggaccaacgtccacgag
gccaagaggattctgaccgaaagcggcctgcccatcacagccgcagacaacctggatgac
gccgccaagaaagcagttgccgccatcaggaaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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