KEGG   Lates calcarifer (barramundi perch): 108886789
Entry
108886789         CDS       T04895                                 
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04120  Ubiquitin mediated proteolysis
lcf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108886789 (stub1)
   04120 Ubiquitin mediated proteolysis
    108886789 (stub1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:lcf03110]
    108886789 (stub1)
   04131 Membrane trafficking [BR:lcf04131]
    108886789 (stub1)
   04121 Ubiquitin system [BR:lcf04121]
    108886789 (stub1)
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108886789 (stub1)
Chaperones and folding catalysts [BR:lcf03110]
 Other chaperones and cochaperones
  Others
   108886789 (stub1)
Membrane trafficking [BR:lcf04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    108886789 (stub1)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  U-box type E3
   108886789 (stub1)
SSDB
Motif
Pfam: U-box CHIP_TPR_N TPR_1 TPR_2 ANAPC3 TPR_8 TPR_11 TPR_16 TPR_12 TPR_17 TPR_19 TPR_6 TPR_9 TPR_7 SHNi-TPR
Other DBs
NCBI-GeneID: 108886789
NCBI-ProteinID: XP_018537341
UniProt: A0A4W6G1K5
Position
LG23:7639011..7645395
AA seq 284 aa
MAGSPEKSSTAQELKEQGNRLFLCRKYQEAATCYSKAINRNPSVAVYYTNRALCHVKLQQ
HDKALADCKHALELDSQSVKAHFFLGQCHLELENYDEAIGNLQKAYNLAKEQRLNFGDDI
PSALRIAKKKRWNSIEEKRINQENELHAYLTKLILAEKERELEEYKEKQDDNQNGGDAAK
IASKHDKYLMDMDELFSQVDEKRKKREIPDYLCGKISFELMREPCITPSGITYDRKDIEE
HLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFIQENGWVEDY
NT seq 855 nt   +upstreamnt  +downstreamnt
atggccggcagcccggagaagagttccaccgcgcaggagctgaaagagcaggggaatcgt
ctgttcctctgccgcaagtaccaggaggctgctacatgctacagcaaagctatcaaccgt
aatccatctgtggcagtgtactacaccaacagggctctctgccacgtgaagctgcagcag
catgacaaggctctggcagattgtaagcatgcgctggagctggacagccagtcagtcaag
gcccacttcttcttgggccagtgtcacttggagctggagaactacgatgaggcaatcggc
aacctgcagaaagcgtataacctggcaaaagaacagaggctgaattttggagatgacatc
cccagcgctttgcgcattgccaagaagaaacgctggaacagcattgaggagaagcgcatc
aaccaagagaacgagttacatgcttatttgaccaaactcatactggctgagaaggaaaga
gaactagaagaatacaaagaaaaacaggacgacaatcaaaatggaggtgatgctgccaag
atcgcatcaaaacatgacaaatatcttatggacatggatgagctcttctctcaagtggat
gagaaaagaaaaaagcgggagatcccagattacctgtgtgggaagatcagttttgagctg
atgagggaaccctgcatcacacccagtggaatcacctatgatcgcaaggacattgaagag
cacctacagcgagtgggtcattttgaccctgtcaccaggagtcccctaacccaagatcag
ctgattccaaacctggccatgaaggaagtcatcgatgcctttatccaggagaacggctgg
gtggaggactactga

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