KEGG   Lates calcarifer (barramundi perch): 108887383
Entry
108887383         CDS       T04895                                 
Name
(RefSeq) transcription factor EC isoform X1
  KO
K15591  transcription factor EC
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lcf03000]
    108887383
Transcription factors [BR:lcf03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Ubiquitous bHLH-ZIP factors
    108887383
SSDB
Motif
Pfam: DUF3371 MITF_TFEB_C_3_N HLH Androgen_recep OrsD
Other DBs
NCBI-GeneID: 108887383
NCBI-ProteinID: XP_018538297
Position
LG18:1806805..1847660
AA seq 491 aa
MFQSSSGPNNQWVISQRDDGQGLYNSGPHPHSWPQFCPPHPSSAVDHSRSQYSYGGAFTR
AQHPVWRQSPNTWKVQSHLENSKFHLHQSQNQQVKQYLTLGSKLASSAGQGHAVPHPHAP
GQPLATVPIMRNGHMPSVSDSSNPNSPVTLLTMANHDSEFPMDEVIDDLISLESGFNDGG
LDCMEPNIIMQNNVSLSSSMLDVYGGEQGMNAPNGGMSPTSNPTKLTVKREYTEHDTRVM
AKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIRWLQK
EQQHARELESRQKKLEQANRRLLLRIQELEIQARAHGLPNMATALGTVELSPHLLKQQQQ
QQQQQQQQQQQQSSPQAQQPQQPPLYQEDPNSDYLQRIAVVAGVPSLPTAGGQQEHIAGA
DGCTTFSDPLSHFTDFFSATLKEEHRLDEILMDDPLSPFGTDPLLSAGSPGAASKDSSRR
SSFSSAEGDDL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgttccagtcgagctccggcccaaacaaccagtgggtgattagtcagagagatgacgga
cagggtttatataattctggaccacatccacatagctggcctcaattctgtcccccacat
cccagcagcgccgttgatcactctcgctcccagtattcttacggaggagccttcaccaga
gcacaacaccctgtgtggcgccaatccccaaacacatggaaggtacagagccacctggag
aactccaagttccacctccaccagagccagaatcagcaggtcaagcagtacctgacgctg
ggctccaagctggcctcgtcggccgggcagggccacgccgtgccgcatccgcatgccccc
ggccagccgctggccaccgtgccgatcatgaggaatggacacatgccctccgtcagcgac
agcagcaaccccaacagccctgttaccctgctcaccatggccaatcacgacagcgagttt
ccaatggatgaagttattgatgacctaattagtcttgaatccggtttcaatgatggaggc
ttggattgcatggagcctaacatcataatgcaaaacaatgtgtccctcagtagcagcatg
ctggacgtctatgggggtgaacaaggtatgaacgcccctaatggtggaatgagtcccaca
tctaaccccacaaagctcactgtaaaaagggaatacacagaacacgacaccagggtgatg
gccaaagagaggcagaagaaagacaaccataatttgattgaaagaaggcgaagatacaac
atcaactacaggattaaggagctggggacactcataccaaagtcaaatgacccagacatg
cgctggaacaaaggcactattctgaaggcctcggtggagtacataaggtggctgcagaag
gagcagcagcacgctcgcgagctggagagcaggcagaagaagctggagcaggcgaacagg
aggctgctgctgaggatccaggaacttgagatccaggcaagagcacatggcctcccaaac
atggctacagccttggggacagttgagctttcgccccacctcctcaaacaacaacaacag
cagcagcagcaacaacaacaacagcagcagcagcagtcgtctccccaggcccagcagccc
cagcagccgcccctctaccaggaggaccccaacagtgactacctccagaggatagcagtg
gtggctggggtaccgtccctccccactgctggcgggcagcaggaacacatcgccggcgct
gatggctgcaccacgttctccgacccgctgtcccacttcacggacttcttcagcgccacg
ctcaaggaggagcaccggctggacgagatcctaatggacgacccgctctcgccgttcggc
accgaccctctcctgtcggctggctcgcccggagccgcgtccaaggacagcagccgcagg
agcagcttcagctctgccgagggtgacgacctataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (50)   

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