KEGG   Lates calcarifer (barramundi perch): 108887718
Entry
108887718         CDS       T04895                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10 isoform X1
  KO
K11841  ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108887718
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108887718
Enzymes [BR:lcf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108887718
Peptidases and inhibitors [BR:lcf01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108887718
Ubiquitin system [BR:lcf04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108887718
SSDB
Motif
Pfam: UCH UCH_1 PAM2
Other DBs
NCBI-GeneID: 108887718
NCBI-ProteinID: XP_018538753
UniProt: A0A4W6EF36
Position
LG2:302060..320897
AA seq 880 aa
MASHCNQYIFGEFSPDEINQFFVTPRCYVELPPFNDKVPCVSQSSGSYCTPAVPYIMESM
GLQVCAEDYQHIEFGVDEVMDSKPVGVNDPLYKVSSTLNPQAPEFILGCQSSQKAQQTAP
PAADVPDGTHFNSLDGPDSEASAMDNHQACQDLDGLPGSLGQRERKKKKKRPPGYYNYLD
PSAGGSNSSGAADGTPLTALVNGHALGGPHHNTEDVDGKALSGAELSTPGPVSTATSTAA
VAAAKFAPSSTANQRTCDSPDDSSLDLTSGAASLSDGNNATSSSSSSSQSRGMTEGPRTA
DQQPDHLAPQSPELSDSPHSPRSKSPLPPSAAVAPPSVVASITTTELEGQEVADSGVANG
LAEREPSISPDGHKEDCESGEQAQQVCPDSAAQPAVTEQAHSPAIPAAPTANLPKSWASL
FHNSKPLPGGPQAFVEVKNVVEVVSPSPATPEQPEKVVEVKDGPVHVSEDPMAPKLAELI
ENVKLIHKPVSLQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLHNETQRPCTSTP
MIDNFVRLVNEFNNMPVPSKAKQQAVGDKVMKDIRPGVPFEPTYIYRLLTLIKSSLSEKG
RQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESQPGVEEDVADKEEEGSED
EWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQLDIQSE
KIRTVQEALETLVARESVQGYTSKTKQEIEISRRVTLEELPPVLVLHLKRFVFEKTGGCQ
KLTKNIDYPVDLEISKDLLSSGVRSKVVKGQRTYRLFAVVYHHGNSATGGHYTTDVFHIG
LNGWLRIDDQTVKVINQYQVVKQTAERTAYLLYYRRVDLL
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggcttctcactgcaaccagtacatctttggggaattcagccctgatgagatcaatcag
ttttttgtgactccacgatgttatgtcgagcttcctccgttcaatgacaaagtcccgtgc
gtcagtcagtcttctggaagttactgcactcctgctgtaccttatataatggagtctatg
ggactgcaggtttgcgcagaagactatcagcacattgagtttggcgttgacgaggtgatg
gactccaagcctgtcggggtgaacgatcctttatacaaagtgtcgagcaccctcaacccc
caggctccagagttcatcctgggatgccagtcgtcccagaaggcccaacagacggctcct
ccggcagctgacgtccccgacggaacccacttcaactcgctggacggccccgactctgag
gcctcagccatggacaatcaccaggcctgccaggacctggacggcctccccggcagcctg
ggacagcgagagaggaagaaaaagaaaaagcgaccgccggggtactacaactatctggac
ccgtcggccggcggcagcaacagcagcggtgcagcggacgggacgcccctgacggcactg
gtgaacggacatgcgcttggcgggccgcaccacaacactgaggacgtggacggtaaggcg
ttgtcaggggctgaactttccacccctgggcccgtctccacagcaacatcaacagctgct
gtggccgcggccaagtttgccccctcttccactgccaatcagaggacttgtgatagccct
gatgactcttctttggacttaacaagtggagctgcctctttatcagatggcaacaatgca
acttcctcctcttcatcctcctctcagagcagagggatgacagagggacccaggactgca
gaccagcagccagatcatttggctccacagagccctgaactctcagatagtccacacagc
ccccgctccaaatcacctcttcctccttcagctgctgtggcccccccctctgtcgtcgct
tccattacgactactgaactggagggacaggaggtagcggacagtggggtggccaatggg
ctcgcagaacgtgagccttccatcagtccagatggacacaaagaagactgtgagagtggg
gagcaggctcagcaggtctgcccagactctgctgcccagccagcagtaacagaacaggcc
cattcgcctgcaattccagctgcacctactgccaacctccccaagtcctgggctagcctc
ttccacaactccaagcctctgcctggggggcctcaggcctttgtggaggtaaagaatgtt
gtggaggttgtgtctccctcccctgctacaccagagcagcctgagaaagtggtggaggtc
aaagatggccctgtccacgtatcagaggatcccatggcccctaaactcgcagaacttatt
gagaatgtgaagttgatacataaaccagtgtctttgcagccgagaggactgatcaacaag
ggaaactggtgctatatcaacgctaccctacaggccctgattgcgtgccctcccatgtat
cacctgatgaagtccattcctctgcataatgaaacgcagagaccatgtacctccacaccc
atgatagacaactttgtaaggctggtgaatgagttcaacaacatgcctgtgccatctaaa
gccaaacagcaagctgttggcgataaagtcatgaaagacattcggcctggtgttcctttt
gagccgacgtacatttacagactcctcactctcatcaagtccagtctctctgagaagggc
cgacaagaggatgcggaggagtatcttggcttcactctcaatggactgcacgaggagatg
ctagcattgaaaaaactaatctcgcctcaggaagagaaagcccccacgcccaacggacca
gagtctcagccgggtgtggaggaagacgttgctgataaggaggaagaaggcagcgaggat
gagtgggagcaagttggcccccgaaacaagacttccatcactcgtcaagctgactttgtc
cgcacacccatcactgatatctttggtggccacatcagatcggtggtgtatcagcagaac
tctaaagagtcggccactctgcagcctttctttaccctgcagctggacatccagtctgag
aagatccgcactgtccaggaggctctggagaccttggtggcacgggagtcggtccagggc
tacacttctaaaaccaagcaggagattgagatcagtcggagggtgactctggaggagctg
ccccctgtcctggtgctccatctgaagagatttgtctttgaaaagaccggaggctgccag
aaactgaccaagaacatcgactaccctgttgacctggaaatcagcaaagatctcttgtcc
tctggagtgcggagcaaagtcgtgaaaggccaaagaacttacaggctctttgcagttgtg
tatcaccatgggaacagcgcgacaggcggtcattacaccacggatgtcttccacatcggt
cttaacggctggctgcgcattgacgaccagacggtgaaggtcatcaaccagtaccaggtg
gtgaagcagactgcagagcgtaccgcctacctgctgtactaccgccgcgttgacctgctg
tag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

Download RDF
DBGET integrated database retrieval system