KEGG   Lates calcarifer (barramundi perch): 108887902
Entry
108887902         CDS       T04895                                 
Name
(RefSeq) fibrillin-1
  KO
K06825  fibrillin 1
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04350  TGF-beta signaling pathway
lcf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    108887902
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108887902
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lcf00536]
    108887902
Glycosaminoglycan binding proteins [BR:lcf00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   108887902
SSDB
Motif
Pfam: EGF_CA cEGF EGF hEGF FXa_inhibition TB EGF_3 Fibrillin_U_N Plasmod_Pvs28 FBN_EGF_st1
Other DBs
NCBI-GeneID: 108887902
NCBI-ProteinID: XP_018539098
Position
LG2:complement(7541723..7600248)
AA seq 2914 aa
MPDSKCGGRLLQLAVALVALLSLCAEFGDAAAELVDAGDSELVTKQTDSRASRAKRRGGT
DVLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPNGQIAPS
CGSKSVQHCNIRCMNGGTCAEDHCLCQKGYVGNHCGQPVCENGCLNGGRCVAPNRCVCTY
GFTGAQCERDYRTGPCFASVNNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPHP
CRRGFIPNHRTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVSQKCEDLD
ECSNIPGLCSVGECSNTVGSYFCKCPQGYHTSLDGSRCIDARGGYCYASVLNGRCANQNS
QLMTKIQCCCDSGRCWSDGSTPEICPIRATEEHQKLCFQLPDGNGGVLIPGHVPGGPDLP
GIYPLPYPGQTPGQVPGQVPGVIPGQIPIQVPGLVPGQVPGQIPGQIPIHIPGHIQPPPP
GPVIIQTQNITNMCQAYRNLCLNGRCIPMPGIGYRCECNMGFRLDGRGECIDDDECERSP
CAHGECVNTPGSYICQCPAGFQTTSTRTECRDLDECVANGRICNNGRCVNTEGSFHCVCN
AGFEISADGKNCQDQDECLIRNMCLNGLCINEDGSFKCICKPGFLLDTSGRMCVDIDECE
TPGMCMNGHCVNTEGSFRCECMAGMAVGLDGRVCVDTHMRSSCYGGYKRGQCVRPLFGAV
TKSECCCASTEYAYGEPCQPCPPQSSAEFLALCPNGVGITGDGRDINECALDPDICQNGV
CENMLRTYKCTCNEGFEVDLTGKNCVDIDECLMNRLLCENGLCRNTPGSFTCQCPKGYRF
DPETDVCEDVNECDSSPCINGDCMNSQGSFVCLCSMGSSLDSSGLECIETTKSTCWLKMV
NNRCEVNINGATLKSHCCATLGEAWNSPCAKCEKDPICSKGFARVRGNVCEDVDECQVFP
GVCINGKCVNTPGSFFCQCPPGMTVDVSGRTCIDLRTEQCYLTHEDERCGAPIPGKHRVD
ACCCSVGVAWGPECDECPEKGTQEYAQLCPRGPGFSHRGDFINGRPFLKDINECRMINTL
CSNGRCRNTIGSFRCRCDNGYALDSDERNCTDIDECRISPDLCGQGRCVNTPGDFECECF
EGYESGFMMMKNCMDIDECERNPLLCRGGDCVNTEGSFQCVCPEGHEIAPDGSACLDINE
CELSDRLCKNGQCVNMIGRYQCTCDTGYKSTENRLECVDIDECTIENGGCETFCTNSEGS
YECSCHSGYALMPDLRSCTDIDECEESPDICDGGQCTNTPGTYQCLCFDGFMSSEDMKTC
LDVDECELNPNICLSGNCENTKGSFICHCDLGYSVRKGTTGCTDINECEIGAHNCDRHAT
CTNTAGSFKCNCAPGWIGNGLKCTDLDECSNGTHMCNNNADCLNTMGSYRCVCKDGFSGD
GFYCSDSDECAENSNLCESGHCLNLPGGFRCECDMGFFPTPDGKACEDIDECTFSDICVN
GRCLNMPGLFRCECNIGYELDRSGGNCTDVNECADPTICINGMCVNIPGSYHCNCPADFE
LNPTRVGCVDTRSGSCFLDVRSRGDASESLVCSNEIGVGVSKASCCCSLGQGWGNPCESC
PSVNTTEYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFGSFQCECSRGF
ALNTDTRVCEDVNECERPGICGPGQCYNTIGNYTCICPVDYMQVNGGNNCMDMRKSYCYR
NFYSDNGTCDGELTFNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDEFAILCGSERPGYYI
DITTGRVIDIDECREIPGVCENGVCINMIGSFRCECPIGFIYNDKLLICEDIDECQNGPV
CQQNAACLNMPGSYRCECKPGYRFTPTGQCLDRNECIENPGICNPGQCIDTLGSYRCICP
NGFKTTRDQSMCVDVDECERQPCGNGTCKNTVGSYNCLCYPGFQNSHNSDCIDVDECATQ
RGLCRNGQCVNTVGTFLCICHDGYELSLDGRLCADINECAVHPGTCGAGTCLNLDGSYRC
ICPPGYYLHEETCEDIDECSQSPELCTFGTCSNTEGSFTCLCPEGFQVSASGLRCLDNRV
NYCYTKFDNGRCLAPKPQNTSKAACCCTGMPGQGWGDPCEICPSKGEDAYLILCPNEGYQ
RGDDDHPKDIDECINDPCINGQCINTDGSFRCECPMGYRLDISGVRCEDTNECDIGNPCG
NGTCTNVIGGFECACDDGFEPGPMMTCEDINECAQNPLLCAFRCVNVVGSYECKCPTGYV
LREDKRMCKDQNECEDGIDDCASRGMTCKNLIGTYMCICSPGYTRQPGGEGCMDLNECTA
KPGICKNGRCENTVGSYRCRCDQGFIANPTQTECIDNREGFCFTEVLTTLCQMTSSNRNM
VTKSECCCDGGRGWGTNCELCPLPGTTQYKRMCPLGPGYTTDGRDIDECRVMGNLCKNGQ
CINTLGSYSCTCKPGYTTDISSTLCVDVDECIQAPKPCNFICKNTEGGYLCSCPRGYILQ
EDGKSCKDLDECSTKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNECATDPNLCGS
NGVCQNTPGSFNCECQRGFSLDPNAQTCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGYL
QHYQWNQCVDENECLNSQICGGASCHNTLGSFRCLCPTGFNYEQTSGGCTDINECSTSQN
PCKFGCSNTDGGYLCGCPPGYFRAGQGHCVTGLGFTSGGPSGGQGGEVDDNSLSPEACYE
CKINGYPKKGRKRRSTNSTQEYPQEHMQLTEKVSLASVDVEDTLQLHLNISDLSSRDHIL
QFTPALSTLSDHVRYSIDYGNEQGYFKINQRDGVSYLHLSKKKALPPGAYYLQISSMPLY
KKKELAELEDRHDKDYLTGQLGDILKMRVQIILH
NT seq 8745 nt   +upstreamnt  +downstreamnt
atgccggacagtaagtgtggaggacggctgctgcagttggccgtggctctggtggccttg
ctgtcgctctgcgccgagtttggagacgctgctgcagagttggtagatgccggggacagc
gagctggtgaccaagcagaccgactccagagccagcagggctaagaggaggggagggacg
gacgtcctcagaggaccaaatgtgtgtggctcgaggaacaacgcctactgctgcccaggc
tggaaaactctgactggaggaaaccagtgcattgttccgatctgccggagttcatgtgga
gatggtttctgctccagacccaacatgtgcacctgtcccaacggccagattgccccatcc
tgtggatccaagtcagtccagcactgtaacattcgttgtatgaacgggggaacatgtgct
gaggaccactgcctgtgccagaaaggctacgtgggaaaccactgtgggcaaccggtttgt
gaaaatggctgtctcaatggaggaagatgtgtggctcccaacagatgtgtgtgcacctat
ggcttcaccggggctcagtgtgagagagactaccgcactgggccatgctttgcctctgtg
aataaccagatgtgtcaaggccagctcacaggcattgtgtgcacaaagactttgtgctgc
gccacagtgggacgggcgtggggtcacccctgtgagatgtgccctgcccaacctcacccc
tgccgaagagggttcataccaaaccaccgcactggggcgtgccaagacgtggatgagtgc
caggccatccctggcatctgtcaaggaggaaactgtatcaacacagtgggatcctttgaa
tgtaaatgccccgctgggcacaagttcaacgaggtctcacagaaatgtgaagatctggat
gagtgttcaaacattccaggtctctgcagtgtaggtgaatgctctaatactgttggcagc
tacttctgcaagtgtccccaggggtatcatacctctttggatggatccaggtgtatagat
gctcgcggtgggtactgctacgctagtgtgcttaacgggcgctgtgccaaccaaaactca
cagctcatgaccaaaattcagtgctgctgtgatagtggacgctgctggtccgatgggtcc
acccctgagatatgtcccattcgtgcaacagaagagcaccagaaactgtgcttccagctt
cctgatgggaacggtggggtactgatacctggtcatgtcccagggggccccgatctaccc
ggcatctacccacttccatatcctggtcagactcctgggcaagttcctggccaggtaccc
ggagtgattcctggtcaaattcccatccaggttccaggcctggtccctggccaagtaccg
ggtcagattccaggccaaattccaattcatattccgggacatatacagcctcctccgcca
ggtcctgtcattatccaaacccagaatatcaccaacatgtgccaggcctaccgcaacctc
tgcctgaatggcaggtgcatccccatgccaggcattggatatcgctgtgagtgcaacatg
gggttcaggttggatggaaggggagagtgcattgatgacgatgaatgtgagagaagcccc
tgtgcacatggggaatgtgtgaacacgcctgggtcttacatctgtcagtgtcctgctgga
ttccagaccacttcaaccaggactgagtgccgagatctggatgagtgtgtggccaacggt
cgtatctgcaacaatggccgctgtgtgaacactgagggcagcttccactgtgtgtgcaat
gctggatttgagatttcagcagatggcaaaaactgtcaagaccaggacgagtgtctgatc
aggaacatgtgtctcaatggattgtgtatcaatgaagacggcagcttcaaatgcatctgt
aaacctgggttcctgctcgacaccagtggacgcatgtgtgtagacattgatgagtgtgag
actccaggcatgtgtatgaacggacactgcgtcaacacggagggatctttccgctgtgag
tgtatggctgggatggcggtgggcctggatggacgggtctgtgtcgacacacatatgcgc
agttcttgttatggtggctacaagcgagggcagtgtgttaggcctttatttggagctgtg
accaagtctgagtgctgctgtgccagcacagagtacgcctacggagagccctgccagccc
tgcccaccacaaagctctgctgagttcctggccctgtgccccaatggtgttggcataacc
ggcgatggaagagatattaacgagtgtgccctcgaccctgacatctgccagaacggagtg
tgtgagaacatgctgaggacatacaaatgcacctgcaatgaaggctttgaggtcgacctg
acgggcaaaaactgtgttgatattgatgaatgtctgatgaacagactgctgtgtgaaaat
ggtctgtgtaggaatacaccaggcagtttcacctgtcagtgtcccaaaggttaccgcttt
gatcctgagacagacgtctgtgaagatgtgaatgagtgtgactctagcccctgtattaat
ggagactgcatgaacagccaggggtcctttgtgtgtttgtgttcaatgggcagttcactg
gacagctctggactggaatgtatagagactactaagagcacctgctggctgaagatggtc
aataatcgctgtgaggtcaacatcaacggggctacactgaagtcccactgctgcgccaca
ctgggagaggcctggaacagcccgtgtgccaaatgtgaaaaagatccaatttgtagtaaa
ggctttgctagagttagaggaaacgtctgtgaagatgtggatgaatgtcaagtgtttccc
ggagtgtgtatcaatggcaagtgcgtcaacacaccgggttcctttttctgtcagtgtcct
cccggaatgactgttgatgtcagcggcaggacgtgcattgacctgcgtacagagcagtgc
tacctcacccatgaggatgagcgctgtggggctcctatcccagggaagcaccgtgtggat
gcctgctgctgctcggttggcgtggcctggggcccggaatgcgacgaatgtccggagaag
ggcactcaagaatatgcacagctctgtcctcggggcccaggtttctcgcacaggggtgac
ttcatcaacggcaggcctttcctcaaagatataaatgagtgcaggatgataaacaccctc
tgctcaaatgggaggtgcagaaacaccatcggcagcttccggtgtcgctgtgacaacggc
tacgctttggactctgatgagagaaattgcactgacattgatgagtgccgcatctctcct
gacctgtgcggacagggcaggtgcgtcaacacgccaggagattttgaatgcgagtgcttt
gagggctacgagagcggcttcatgatgatgaaaaactgcatggacatcgatgagtgtgag
aggaaccctctgctgtgccgtggcggcgactgtgtaaacacagagggcagcttccagtgc
gtgtgccccgagggacacgagatcgcacccgatgggtcggcctgtctagatatcaatgaa
tgtgagttgagcgacaggctgtgcaagaacggccagtgtgtcaatatgatcggccgctac
cagtgtacctgcgacacaggatacaaatctactgagaacagactggagtgtgttgacatt
gacgagtgtaccattgagaatggtggctgtgagaccttctgcaccaactccgagggtagt
tatgaatgcagctgccacagtggatacgccctgatgcctgatctgagaagctgcactgac
attgatgagtgtgaggagagcccagacatctgcgatggaggccagtgtaccaacacccca
gggacgtaccagtgcctatgctttgacggcttcatgtcatctgaggatatgaagacatgc
ctggatgttgatgagtgtgagttgaacccaaacatctgtctgagcgggaactgtgagaac
actaagggatccttcatctgccactgcgacctgggatactctgtgcgcaaggggaccaca
ggctgcacagatatcaatgagtgtgagatcggagctcataactgcgacagacatgctacc
tgcaccaacacagccggcagcttcaagtgcaactgcgctccagggtggattggcaatggc
ctcaaatgcacagacctggatgagtgctccaatgggacacacatgtgcaacaacaatgct
gactgtctcaacaccatgggctcatatcgctgtgtgtgcaaggatggattctctggagat
ggattctactgctcagacagcgatgagtgtgcagagaacagcaacctgtgtgagagtggc
cactgtttgaacctgccaggaggcttccgctgtgaatgtgacatgggtttcttccctact
cctgatggcaaagcctgcgaggacatagacgaatgtaccttttctgacatctgtgtcaat
ggacgctgcctgaatatgccaggactttttagatgtgaatgtaacattggttatgagctg
gacaggagtggaggcaactgcacagatgtcaatgaatgcgctgacccaaccatttgtatt
aatggaatgtgtgtcaacatccctggaagttaccactgtaactgcccggcagactttgaa
ctcaaccccactcgggtgggctgtgtagatactcgctctggaagctgcttcctggatgtt
cgttcccgaggagatgcatctgagagcctggtctgctccaatgagatcggagttggggtt
tcaaaggcatcctgctgttgctccctcggccaaggctggggaaatccatgtgaatcatgc
ccctctgtcaacacaactgagtacaagacgctgtgtcccggaggagaaggcttcagacca
aacccaatcactgtcatcttggaagatatcaatgaatgtcaggagttgccaggcttgtgc
cagggaggacagtgcatcaacacctttggcagcttccagtgtgaatgttcaagaggcttt
gccctcaacacagacaccagagtctgtgaagatgtcaatgagtgtgaacgaccaggtatc
tgtggcccaggccagtgctacaacactattgggaactacacctgcatctgtcctgtggac
tacatgcaggtcaatggaggaaacaactgcatggacatgaggaagagctactgctacaga
aacttttactctgacaacgggacgtgtgatggagagctgaccttcaacatgaccaaaaag
atgtgctgctgctcctacaacatcggccgtgcatggaacaaaccctgtgaacagtgtcct
gtgcccagcactgatgagtttgcaatcctgtgcggcagtgagagaccaggatattacatt
gacatcaccactggacgggtcattgatattgatgagtgcagggaaatcccaggagtgtgt
gagaacggagtctgcatcaacatgatcggcagcttcaggtgtgagtgcccaatcggtttc
atttacaacgacaagctgctgatttgcgaagatattgatgaatgtcagaatggacccgtg
tgccagcagaatgcagcctgtctgaacatgccaggaagctaccgctgcgagtgtaaacct
ggatatcgcttcactcccactggacaatgtctagaccgaaatgaatgtattgagaaccct
ggtatatgcaatcctggtcagtgcattgacacgctgggtagctatcgctgcatctgcccc
aatggcttcaagacaacgcgggaccagtcaatgtgtgtcgatgtggacgagtgtgagaga
caaccctgcggcaatgggacctgtaagaacacagtgggctcgtacaactgtctctgctac
cccggctttcagaactctcacaacagtgactgcatagatgtcgatgagtgtgcaacgcag
agaggcttgtgtcgaaatgggcagtgtgtgaacacggtgggcaccttcctctgcatatgc
catgatggctatgagctctctttagatggcagactgtgtgcagacatcaatgaatgtgca
gtgcatccaggcacatgtggtgcaggaacttgtctgaatctggatggctcttacaggtgt
atctgcccacctggctactatctccatgaggaaacctgtgaagatattgatgagtgctcc
cagtcacctgagctctgtacatttggaacctgctccaacactgaaggaagcttcacctgc
ttgtgtcctgaaggcttccaggtctctgcctccggactcagatgtttagataaccgtgtg
aactactgctacaccaagtttgataatgggcgctgcctggctccaaagcctcagaacacc
tccaaggcagcgtgctgctgcactgggatgccaggtcaaggctggggagacccctgtgaa
atctgccccagcaaaggagaggatgcatatcttattctctgtcccaatgagggatatcaa
cggggtgacgatgaccacccgaaagatattgatgaatgcatcaatgacccttgcattaac
ggccagtgcatcaacacagacggctctttccgctgtgaatgtcccatgggataccgcctg
gacataagtggagtcagatgtgaagacactaatgagtgtgacattggcaatccttgcgga
aacggcacatgcactaatgtcattggcgggtttgagtgcgcgtgcgatgacggctttgag
cctggtccgatgatgacctgtgaagacatcaatgagtgtgcacagaatcctctactgtgc
gccttccgctgtgtcaacgtggtgggttcgtacgagtgcaaatgtcccacgggctacgtt
ctgcgcgaggacaagaggatgtgtaaagatcagaatgagtgtgaagatggcatagatgac
tgtgccagcagaggcatgacctgcaagaacctgattggcacatacatgtgtatctgttcc
cctggatacacacggcagcctggtggagagggatgcatggatttgaatgagtgtacagcc
aaaccaggtatctgtaagaacggccgttgtgagaacacagtaggaagttaccgctgcaga
tgtgaccaaggtttcatcgctaaccccacacagactgaatgtattgataaccgtgaaggg
ttctgtttcactgaggttctgaccactctgtgtcagatgacttctagtaacaggaacatg
gtgaccaagtcagagtgctgctgtgatggaggcagaggctggggcacaaactgtgagctc
tgtcccttgccggggaccacccagtataagaggatgtgtcctctgggacctgggtacacc
actgatggcagagatattgatgagtgtcgtgtcatggggaacttgtgcaagaatggtcag
tgtatcaacactttgggctcctacagctgcacctgcaaacctggctacactactgatatt
agcagcacgctgtgtgtggatgtggatgagtgcatacaggcaccaaagccttgtaacttc
atctgtaagaacacagagggaggctacctctgttcctgccctcgtggatacatcctacaa
gaagatggaaagagctgcaaagatctggatgagtgttcaaccaaacagcacaactgccag
ttcttatgtgttaacaccattggtgggttcacctgcaaatgtcctcctggcttcacccag
catcatactgcctgcattgacaacaatgaatgtgcaacagaccccaatctgtgcggctcc
aacggtgtctgccagaacactccagggagcttcaactgcgagtgccagagaggattctca
ttagatcccaatgcgcaaacctgtgaagatatggatgagtgtgatggtaaccacaggtgt
cagcatggctgtcagaacttagttggtggatacaggtgcagctgtccacaaggctacttg
cagcactaccagtggaaccagtgtgtggatgagaacgagtgtttgaacagccaaatctgc
gggggagcgtcatgccacaacacccttgggagcttccgctgtctctgccccactggcttc
aactacgagcagaccagcggaggctgcacagacatcaacgagtgctccaccagccagaac
ccctgcaagttcggctgctctaacacagacgggggctacctctgtggatgtccacccgga
tacttccgtgcaggacaagggcactgtgtcactggtctgggctttactagtggtggcccc
agtggtggacaaggaggtgaagtggatgataattctctgtctcctgaagcctgctacgaa
tgtaagatcaacggctatcccaagaagggacgcaaacgtcgcagcaccaactcaacacaa
gaatatcctcaggagcacatgcagctgactgagaaggtcagtctggccagtgttgatgtt
gaggacaccctgcagctccacctgaacatcagcgacctgagtagtcgtgaccacatcctt
cagttcaccccagccttatccaccctcagcgaccacgtgcgctacagcatcgactacggg
aacgaacaaggctacttcaagatcaaccagagagatggcgtcagctacctgcatctgagc
aagaagaaggccctccccccaggggcgtactaccttcagatcagcagcatgcccctctac
aagaagaaggagttggctgagctggaggaccgacatgataaagactacctcacaggacag
ctgggagacatactgaagatgagggtgcagatcatcctccattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (77)   
   KEGG ORTHOLOGY (1)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (100)   

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