KEGG   Lates calcarifer (barramundi perch): 108888482
Entry
108888482         CDS       T04895                                 
Symbol
cald1b
Name
(RefSeq) caldesmon isoform X1
  KO
K12327  caldesmon
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    108888482 (cald1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108888482 (cald1b)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     108888482 (cald1b)
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 108888482
NCBI-ProteinID: XP_050929194
Position
LG10:complement(8548501..8574139)
AA seq 756 aa
MDDDFDRRMELRRQRREQMRLEAEKVGYTNDDDDEEARERRRRAREERKKMRDLEESGTT
DVIDTNSAETESSSTTTSTSTGGADDDQALLERLAKREERRQKRMKEAMERQKEFDPTVG
TTNGTDSMLEEQSSVSSGRQQHTEEEEDKKEEEKPAQEVVAETDTNSWRKEEEDKKEEEK
APVEDSTTQATKDEEETEAAATEVEVDAGKKDAHEEAAPDVDNEEEERKKKEEEERQQKE
LEEKQRIEEEERQKREMEEKLKREEEEREQKEEEERKKRGEEEQQQREMEERLRKEEEEE
KRKKEMEEKLKKEEEEKQKKEMEERLKREEEEKQKKEMEEKKKKEEEDKRKKEMEEKKKK
EEEEKKKKKELEEKKKKEEEERRKKEMEEKKKEEEEKRKKEAEERKKKEEEDKRKKREVE
EKKKKEEEEKPRKFGFKEKNEPAKQNGAFIENKLKKTEKTSRDNAPSTKADDLERQEAER
KLQELKRRRNDAESEEFEKMKQKQQDAEAELEELKRKREERRKILEEEEKQKKQELEEKK
AKEQEERKRMREEIEKRRAEAAEKKKQKEEDTTKPAFAISPKGSSKIGEKAEFLNKSAQK
NTAARVSHTPIVSKIGNRLEQYASAIQGNKEAKSPKSPMADIPTGGTRSIKSMWEKGNVG
GSSESPSPVNKELAGIKGGVAGRVNSWMAKPPEAEKTTPAPAPAAAAASPAAKPADVKPG
DVGNKRGMWETKKGSTPAKVPVGVKSKFVTNAGVRP
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggacgatgactttgaccgccgcatggagctgaggaggcagaggagagagcagatgcgc
cttgaggctgaaaaggtgggttacaccaatgacgatgatgatgaggaagcacgggagcga
aggagacgtgcaagggaggagagaaagaagatgagggacttagaggagtctggtaccact
gacgtgatcgacactaacagcgcagagaccgagtcctcctccaccaccaccagcaccagc
accggaggtgcagatgatgaccaggctttgctggagcgccttgccaagagggaggagcgc
aggcagaagcgaatgaaggaggccatggagagacagaaggagtttgaccccactgttggc
accaccaacggcacagacagcatgctggaggagcagtcctctgtcagcagcggcagacag
caacacacggaggaagaggaggacaagaaggaggaggagaaaccagctcaggaggtggtg
gcagagactgacacaaactcctggaggaaagaggaagaagataagaaggaagaagagaag
gcacctgtcgaggactcaacaacacaagccacaaaagatgaggaggagactgaggctgca
gcaacagaagtagaggttgatgcaggaaagaaagacgctcatgaggaagctgctcctgat
gtcgacaacgaggaagaggaaaggaagaagaaagaagaagaggagagacagcaaaaagag
ttggaagaaaagcagaggatagaagaggaggagaggcaaaaaagggaaatggaggaaaag
ctaaagagagaggaagaagagagggagcagaaggaggaggaggagaggaagaagagggga
gaggaggaacaacaacaaagggaaatggaggagaggctgagaaaggaggaggaagaagaa
aaacggaaaaaagagatggaggaaaaactgaaaaaagaggaagaggaaaaacagaagaag
gagatggaggagcggctgaagagggaggaggaggagaaacagaagaaggagatggaagag
aagaagaagaaagaggaagaggacaaacgaaagaaggaaatggaggagaagaagaaaaag
gaggaggaggaaaagaagaagaagaaagagctggaggagaagaagaagaaagaggaggag
gagagacggaaaaaggagatggaggagaagaagaaagaagaggaggagaagcggaaaaag
gaggctgaggagaggaagaaaaaagaagaagaggataaacgtaaaaagagagaggtggaa
gaaaagaagaagaaagaggaggaggagaagccaaggaaatttggtttcaaggaaaagaat
gaaccagccaaacagaatggagctttcattgagaataagctgaagaaaacagagaagaca
tcaagggacaacgctccctccactaaggcagacgacctggagcgacaggaggctgaacgc
aagctgcaggagctgaagcgccgacggaacgacgcagagagtgaggagtttgagaagatg
aagcagaagcagcaggatgcagaggccgagctggaggagctgaagaggaagagagaggag
aggaggaagatcctggaggaggaggagaagcagaagaaacaggagctggaggaaaagaaa
gccaaagaacaggaggagaggaagaggatgagggaggagatagagaagaggagggcggag
gctgcagagaagaagaaacagaaggaggaagacaccacaaaacctgcctttgctatcagt
cccaaaggctcctccaagatcggggagaaggcagaattcctgaacaaatcagcccagaaa
aacactgcagccagagtgtcacacactccaattgtttccaagataggcaacagactggaa
cagtacgcgtctgccatccagggaaacaaagaagccaagtcccccaagtctccaatggca
gatattcctacaggaggcacccgcagcatcaaaagcatgtgggaaaaaggcaatgtcggc
ggctcctctgaaagtccatcccctgtcaacaaggaactggctggtatcaaaggaggtgtg
gctggacgtgtcaacagttggatggcaaagcctccagaggcagagaagacgacaccggca
cctgcaccagcagcagcagcagcatcaccagcagcaaagccagcagatgtgaaaccaggc
gatgttggtaacaagcgtggcatgtgggaaaccaagaagggctctacacctgccaaggtg
ccagttggggtaaagagcaagtttgtcacaaatgcaggcgtaagaccgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (73)   

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