KEGG   Lates calcarifer (barramundi perch): 108888772
Entry
108888772         CDS       T04895                                 
Name
(RefSeq) sodium/calcium exchanger 3 isoform X1
  KO
K05849  solute carrier family 8 (sodium/calcium exchanger)
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04020  Calcium signaling pathway
lcf04260  Cardiac muscle contraction
lcf04261  Adrenergic signaling in cardiomyocytes
lcf04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    108888772
   04020 Calcium signaling pathway
    108888772
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    108888772
   04261 Adrenergic signaling in cardiomyocytes
    108888772
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lcf02000]
    108888772
   00536 Glycosaminoglycan binding proteins [BR:lcf00536]
    108888772
Transporters [BR:lcf02000]
 Solute carrier family (SLC)
  SLC8: Na+/Ca2+ exchanger
   108888772
Glycosaminoglycan binding proteins [BR:lcf00536]
 Heparan sulfate / Heparin
  Others
   108888772
SSDB
Motif
Pfam: Calx-beta Na_Ca_ex_C Na_Ca_ex
Other DBs
NCBI-GeneID: 108888772
NCBI-ProteinID: XP_018540446
Position
LG14:6172737..6261587
AA seq 1000 aa
MTGSRPGLLPREPNRIWTPPHTEPTQKNPVESSEGLAPSAEMAPAAMSMPPSSLTSFRPS
RLSSSLFFFSLSFFLLLSCPGSVHASSSEKNCSASGDVCQEGVVLPVWNPQNPSVGDKVA
RAIVYFVALIYMFLGMSIIADRFMSSIEVITSQEKEITIKKPNGETTTATVRIWNETVSN
LTLMALGSSAPEILLSVIEVCGHNFEAGSLGPSTIVGSAAFNMFIIIALCVYVVPDGETR
KIKHLRVFFVTAAWSIFAYIWLYVILSVFTPGVVEVWEAVLTLLCFPLCVVQAWVADRRL
LFYKYVRKRYRADKNRGIIIESEGGADGGIGGLDGGGGALGPGGFTKMDMLELDGQMALN
CHSGMDGGLMEEGGAKDEEDEARRDMARTLKELKQRHPDKDMEQLIEMANYQVLMQQQKS
RAFYRIQATRMMIGAGNILKKHAADQARKVVSSHETQAQEDDPHTIRMEFEPSLYQCFEN
CGSLKLTVARHGGDPGVTVKVDYRTEDGTANAGSDYEFAEGTLLFKPGETLKEITVGVID
DDIFEEDEYFYVHLSNPRVVGYPEIGTAPLDASATPKAVLGDNHTATVTIYDDDHAGIFT
FESASHRVSESVGVMEVKVLRTSGARGLVAVPYRTLDGTAKGGEDYELAAGKLEFQNDET
MKIIEVKIIDDEEYEKNKTFTIELGEPVLLEIGQKHGDSNENKPLVGAEEEEVAKMGCPS
LGEHTQLEVIIEESYEFKRALNTLLRRAQKSTVDKLIKKTNLALVVGSSSWREQFVSAVT
VSAGDDDEEESGEERLPSCFDYIMHFLTVFWKVLFAFVPPTEYWNGWACFIVSISLIGVL
TAVTGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGNVTGSN
AVNVFLGIGVAWTIAAIAWRAEGKPFKVDPGNLAFSVTLFTILAVVCVITLLYRRRASVA
GGELGGPRTCKLLTSLLFVSLWLVYILLASLEAYCHIPLF
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgaccggatcccgacccgggcttcttccaagagaaccgaaccggatttggacgccaccc
cacaccgagccaacacagaagaacccagtagagtccagtgaaggcctggctccgtcagca
gaaatggctccagcagccatgtctatgcctccatcctctctcacctccttccgcccatcc
cgcctgtcctcatccctcttcttcttctccctctctttctttctgctcctgtcatgtcct
ggatcggttcacgcaagttcatctgagaaaaattgttcggctagtggagacgtctgtcag
gaaggagtggtcctgccagtgtggaaccctcagaacccctctgtaggggacaaagtagca
cgggccattgtttatttcgtagcgctcatctacatgttcctgggcatgagcattatagcg
gatcgattcatgtcgtctatagaggtcataacctcccaggagaaggagatcaccataaag
aaaccgaatggtgagaccaccacggccacggtcaggatctggaatgagaccgtttctaat
ctcactctaatggctttgggttctagtgccccagagatactgctgtctgttattgaggtg
tgcggtcacaatttcgaggccggctctctgggtcccagcaccatcgtgggcagtgctgcc
ttcaacatgttcatcatcatcgccctgtgtgtgtacgtggttcccgacggagagacacgc
aaaattaaacaccttcgggtattttttgtcacggcagcatggagtatctttgcctacatc
tggctctatgtaattctgagtgtcttcacgcctggagtggtggaggtatgggaggcagtg
ctgaccttgctctgcttccccctctgcgtggtccaggcctgggtggctgaccgccgcctc
ctcttctacaagtacgtccgcaagcgttaccgtgctgacaagaaccgcggcatcatcatt
gaatctgagggaggggcggatggagggataggaggcctggacggaggaggaggagcgcta
ggtccgggtgggttcactaagatggacatgctggagctggacggacagatggcattgaac
tgtcacagcgggatggatggagggttgatggaagagggaggagcgaaggatgaggaggac
gaggccaggagggacatggctaggaccctgaaggagctgaagcagaggcacccggataaa
gacatggagcagctgattgagatggctaattatcaggttttgatgcagcagcagaagagc
agagcgttctaccgtatccaagcaaccaggatgatgatcggcgccggcaatatcctcaag
aagcacgctgccgaccaagctcgcaaggtggtgagcagccatgagacccaggcccaggag
gacgaccctcacaccatcaggatggagtttgaaccctctttgtaccagtgcttcgaaaac
tgtggctccctgaaactgactgttgccagacatggaggagaccctggagttactgtcaag
gtggattatcgcacagaggacggtacagcgaacgcaggttcagattatgagtttgccgag
gggacgctcctgtttaagcctggagagaccctcaaagagatcacagttggagtgattgat
gacgacatctttgaggaggatgagtatttctacgtccaccttagtaaccctcgggtggtt
ggttatcccgagatcggcactgcccctctggatgctagtgccactcccaaagccgtgctg
ggtgacaaccacacagccacagtgaccatctacgatgacgatcacgcaggtatctttacc
tttgagagcgccagtcacagggtgagcgagagcgtaggagtgatggaggtgaaggtactc
aggacttcaggggcccgaggcttggtagctgtcccctatcgaaccctggatggcaccgct
aaaggaggggaggactacgaactggctgctggcaagctggagtttcagaacgacgagaca
atgaagatcatcgaggtgaagattattgacgatgaagagtatgagaagaacaagaccttc
accatcgagctgggagagccggttctgttggagataggacagaaacatggtgactccaat
gagaacaagccattggtgggggcagaggaggaggaggtggctaagatgggctgtcccagt
ctgggtgaacacacacaactagaagtgatcatagaagagtcctacgagtttaagagagca
ttaaatacacttcttaggagggctcaaaagagtacagtagataagctgatcaagaagaca
aacctggcgttggtggtgggaagcagcagctggagggagcagtttgtcagtgctgttact
gtcagtgcaggagatgatgatgaggaggagagtggggaggagcggctgccgtcctgcttt
gactacatcatgcacttcctcaccgtcttctggaaggttctgttcgccttcgtcccaccc
acagagtactggaacggctgggcctgcttcatcgtctcaatatcacttatcggcgtcctg
acagcagtcaccggcgatctggcctcacactttggctgcacgataggactgaaggactct
gtgaccgctgtggtgtttgtggcgctgggaacatcagtgccagacacattcgccagcaaa
gtcgctgccatccaggaccagtacgcagacgcctccatcggcaacgtcacaggctccaac
gccgtcaacgtcttcctgggtattggcgtggcgtggaccatcgcagccatcgcctggcgc
gcagagggcaagcccttcaaagtggacccgggaaacctggccttctccgtcaccctcttc
accatcctggccgtggtgtgcgtgatcacgctgctgtaccggcggcgggcgtcggtggct
ggcggcgagctgggcggaccgcggacttgcaagctgctaacgtcgctgctgttcgtctcg
ctgtggctggtttacatcctgctggcttcactggaggcctactgccatataccactgttt
taa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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