KEGG   Lates calcarifer (barramundi perch): 108888912
Entry
108888912         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 5
  KO
K10168  toll-like receptor 5
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04620  Toll-like receptor signaling pathway
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108888912
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108888912
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lcf04054]
    108888912
Pattern recognition receptors [BR:lcf04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   108888912
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRR_9 FNIP LRR_6
Other DBs
NCBI-GeneID: 108888912
NCBI-ProteinID: XP_018540651
Position
LG7_1:5091662..5094760
AA seq 644 aa
MRTLGLQVVFTCVLLQVPGCFPSCIIRGSVANCAFRRLVSVPALPPNITHLYLEMNHIRE
INSTSLSGLEQLQVLDLGGQRSPLVIRGDAFSRQSRLRKLILGMNFGLQLEAQAFVGLSG
LQELHLDSCSLEESILKEDFLQPLSSLETLSLFGNRIKRLQPSMFFTNMTNWKNLNLKLN
KIDKICESDLVGFQGKHFEVLNLDSVHLEAMSDKNFDWKKCGNPFRGMSFQMLDLSYNGL
GMGKLKQFLRAIEGTKISHLKLSGPMGRGFSFNNLPDPDQSTFDGLKNSSVLTLDLSKNM
IFALQQGVFSPLKEAVMIDVSQNKVNHIHRNAFKGLQGHLQLLNLSHNLLGEIYSYTFAP
LTNLQVLDLSHNHIGALGYDSFSGLPNLRGLFLTGNALRDLGFPAPLPRLDYLLLNDNKL
TPSSVNSIIRFASNIRHLGIEDNRLTNLADVYTFLTQLKRLQHLFYRRNTIKWCTLSQQE
SRIGPNNLTVLDLGSSSLQSVWSQGKCLNLFDNLGHVVSLSLSSNGLQSLPQGIFKGLTS
VVEMDLSSNALTHLEPEVLPKTLKTLNLSNNFISSPDVTAFQSLRYLNLKMNRFHCNANL
KSFLTWLNKTNVTFLSPVQELRCEFPSDLYKVTLLDYSAQVKQQ
NT seq 1935 nt   +upstreamnt  +downstreamnt
atgaggacgctgggtcttcaggtggttttcacctgtgttctcctacaggttccaggatgt
ttcccatcatgcatcatcaggggctctgtggccaactgtgccttccggagactggtttca
gttcccgctctccctccgaacatcactcacctgtacctggagatgaaccacatccgtgag
atcaactccacctccctgtcaggcctggaacagctgcaggtgctggaccttgggggacag
cggtcgccgctcgtgatcagaggcgacgccttcagcagacagagtcgcctgaggaagttg
atactcggcatgaacttcggccttcaactggaggcgcaagccttcgtggggctatctggt
ttgcaggagctccacctggattcttgttcacttgaagagtcgatactgaaggaagacttc
ctgcagccgctgtcgtctttagagactcttagcctctttgggaaccgcataaagagactg
cagccttcgatgttcttcacaaacatgactaattggaaaaatctgaacctgaagctgaac
aaaatcgataaaatatgtgaatcagatctggttggtttccaggggaagcactttgaggtc
ctgaacttggactcggttcaccttgaggccatgtctgataaaaactttgactggaagaaa
tgtgggaatcctttcaggggaatgtcctttcagatgctcgacctgtcctacaatgggctt
ggcatgggtaaattgaagcagtttctcagagccatcgaggggacgaagatctcccacctc
aaactgtcaggaccaatgggtagagggttttccttcaataacctccccgatccagaccaa
agcacgtttgatggcttaaagaacagctcagtcctcactttggatctgtccaaaaacatg
atatttgcgctgcaacagggggttttcagtccgctgaaagaggctgtgatgattgacgtt
tcccaaaacaaggtgaatcacatacacagaaacgccttcaaaggtcttcagggtcattta
caattgctcaacctgtcgcacaacctgctcggggaaatctactcttacacttttgctcct
ctgacaaacctgcaagtgttggacttgtctcacaatcacattggtgccttgggttatgac
tcgttcagcggacttcccaacctgagaggcttgtttctgacaggaaacgctctgcgagac
ctaggtttccctgcaccgttaccaagattagattatcttctgttgaacgacaataagttg
acgccctcgtcggtgaacagcatcattcggttcgctagtaacatcaggcatctgggcatt
gaggacaacaggttgacgaacctggcggatgtttacacctttctgactcagctgaaacgc
ctccagcatctcttctacagaagaaacacaatcaagtggtgcactctcagtcaacaagag
tccagaattggcccgaataacctcacagtcctggatcttggcagcagctccctacagtct
gtctggtctcagggcaaatgtctgaatctgttcgacaacctcggacatgtggtcagcctc
agcttgagctctaatggtctgcagtcccttcctcaaggcatcttcaagggtctcacctca
gtggtcgagatggacctatcgtcgaacgccttgacgcatctcgaacctgaggtgttaccc
aaaactttgaaaacactcaacctatccaacaacttcatatcctctccggacgtgactgct
ttccagtctctcaggtacctcaacctcaaaatgaaccgattccactgcaacgccaacctg
aagagttttctgacctggctgaacaagaccaacgtcactttcctgagtccagttcaggag
ctcagatgtgaatttccatctgatctctacaaagttactctgttagattactctgctcag
gtcaagcagcagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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