KEGG   Lates calcarifer (barramundi perch): 108889986
Entry
108889986         CDS       T04895                                 
Name
(RefSeq) RNA-binding protein 5
  KO
K13094  RNA-binding protein 5/10
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108889986
Spliceosome [BR:lcf03041]
 Complex A
  Other components
   Complex A specific factors
    108889986
SSDB
Motif
Pfam: G-patch OCRE RRM_1 zf-RanBP G-patch_2 RED_N GSIII_N zf-C2H2_4 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 108889986
NCBI-ProteinID: XP_018542231
UniProt: A0A4W6D2D2
Position
LG12:24770407..24778656
AA seq 859 aa
MGADKRISRTERSGRYGSDQSRDESDWRDRRERDQERDHNMRRWGEERRSDRYEGGDRRG
SRDSPEQRERKRRNSDRSEDGYHSDGDYPEQDYRRDPGDEKKSKTIMLGGLSPHVTEDDI
RFAIDQLEGPQPVDVRLMKKKTGISRGFAFVDFYHLQDATRWMETNQKRLTIQGKSVDMH
YSHPRNKYEDWLCNTCGLYNFRRRLKCFRCGAAKAESETGSNTGVSETQPSGDFYGDTII
LRNIAPLTTVEAIMTALAPYANLSSNNIRLIKDKQTGQNRGFAFVQLSSPLEASQLLTIL
QGLQPPLKLDGKTIGVDYAKSARKDLLLPDGNRVSAFSVASTAIAAAQWSSSQPQQSSEG
MSEYSYLQEGYTPMSQDYQTFYQQGAGASTSQGNGILGAAPGVKIVPTAAGVVISQSAQV
YQPHIIAQPAVQALPLAQQLEVKPQTGHLSGIEAASVPVVPVVAATVTATSTVTASGQTA
DTSTAVPDTSTYQYDESSGYYYDPQTGLYYDPNTHYYYNSQTQQYLYWDSEKQTYVPAPS
DTNAGQNDNASGSAATGSKESKEGKEKKEKPKSKTAQQIAKDMERWAKSLNKQKENFRSS
FQPISQEERKEAAAADAGYTLFEKKQAGSLDRLMPEMPRGLEEEPPTSSVNTSKCGLVAA
YSGDSDPEEGGAEPDSGDIGQDKLTDWKKLACLLCRRQFPNKESLIRHQQLSDLHKKNLE
VLRRSKLTEAELEELERKETEMKYRDRAAERREKYGIPEPPVPKKKKFNQPPPVINYEQP
TKDGLNSDNIGNKMLQAMGWKEGKGLGRNQQGITAPIEAQLRTKGAGLGTKGTNYTLSAS
DTYKDAVRKAMFARFTELE
NT seq 2580 nt   +upstreamnt  +downstreamnt
atgggagccgataaaaggattagccggacagaacgtagcggtagatatggctctgaccag
tcccgcgatgaatcagattggcgtgacagacgagagagggatcaagagcgtgatcataac
atgcgccgctggggggaagagagacgcagcgaccgttacgaaggaggagatcgtcgaggc
tcgagagacagtccagagcaaagagaaaggaagcgacgcaacagtgatagatcagaagat
ggttatcactctgatggcgactacccagaacaggattacagaagagatccgggggacgag
aagaagagcaagaccatcatgctcgggggtctgtctcctcatgtcactgaggatgatatt
cgttttgccatagaccaactggagggaccccagccagtggatgtcaggctgatgaagaag
aaaacaggtataagccgtggtttcgccttcgtggacttttatcacttgcaagatgctacc
cgatggatggagaccaatcagaaacgtctgaccatccaaggcaaaagcgtggacatgcac
tacagtcaccccagaaacaagtatgaagactggctctgcaacacttgtggcctgtacaat
ttccggaggaggctgaagtgcttcaggtgtggagcagccaaagctgaaagtgaaaccggc
agtaatactggagtctctgaaactcaaccaagtggagatttctatggcgacacaatcatc
ctgagaaatattgctcccctgaccactgtggaagccatcatgacagccctggctccgtat
gctaatctgtcatctaacaacattcgcctcatcaaagacaagcagacaggccagaacaga
ggttttgcctttgtgcagctgtcctcccctctggaggcctctcagctgctaaccatctta
caggggctgcagcctcctctaaaactggatggaaaaacaattggggtggattatgctaag
agtgctagaaaggaccttttactgccagatgggaatcgtgtcagtgccttctctgtggcc
agcacagccatcgctgcagcccagtggtcctcaagtcagccacaacagagctcagaggga
atgtcagagtacagctacctgcaagaaggctatactccaatgtcacaggactatcagaca
ttttaccagcaaggagcaggagccagcacctcacaaggaaatggaattctaggagccgcc
ccaggtgtaaagattgttccaactgcagctggagtagtgatctcacagagtgcacaagtc
taccaaccccatataattgctcagcctgctgttcaggcactgccgcttgctcagcagcta
gaggtaaaaccccagacgggacatctctcaggcattgaagctgcatctgtgcccgttgtc
cctgtagtcgctgccactgttaccgctaccagtacagtaacagcctctgggcagacagct
gacaccagcaccgctgttcctgatacatccacctatcagtatgatgagtcctctggctac
tattatgaccctcaaactggtctctactatgacccaaacacacattattactacaactct
cagacccagcagtatctgtactgggacagtgagaagcagacatacgttccagccccaagt
gacacaaatgctggacaaaatgacaacgcaagtggctctgcagcaacaggaagcaaagaa
tctaaagaaggcaaggagaaaaaggaaaagcccaaaagcaagacagcacaacagattgct
aaagacatggagcgatgggctaaaagtctcaacaagcagaaagagaactttaggagcagc
tttcagcctattagtcaagaggagaggaaggaggcagcagctgctgatgctggctacacg
ctgtttgaaaagaagcaggcaggaagtctggacagactcatgccagagatgccaaggggc
cttgaggaggagccaccaaccagctcagtcaacacctccaagtgtggccttgtggcagcc
tacagtggagacagtgaccctgaggagggtggagcagagcccgacagtggcgacataggc
caagacaagctgacagactggaagaagctggcctgcctgctgtgtcggagacagtttccc
aataaagaaagtctaattcgacatcagcaactctctgacctccacaagaaaaacctggag
gttctccgccggtccaaactgactgaagcagagctggaagagttggaaaggaaagagacc
gagatgaaatatagagacagagcagccgagaggagagaaaaatatggaatccctgaaccc
ccagtgccgaaaaagaagaaatttaaccaaccaccaccagtcattaattatgagcagccc
actaaggacggcttaaacagtgacaatattgggaacaaaatgctgcaggccatgggctgg
aaggaggggaaaggacttggtcgcaaccagcagggcatcactgcaccaattgaggcacag
ttgagaacaaaaggagctggacttggtactaaaggcaccaactacaccctctccgcttca
gacacgtacaaagacgcagtccgcaaagccatgttcgctcgctttactgagctggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system