KEGG   Lates calcarifer (barramundi perch): 108890455
Entry
108890455         CDS       T04895                                 
Name
(RefSeq) CAD protein
  KO
K11540  carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3]
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf00240  Pyrimidine metabolism
lcf00250  Alanine, aspartate and glutamate metabolism
lcf01100  Metabolic pathways
lcf01240  Biosynthesis of cofactors
Module
lcf_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    108890455
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    108890455
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lcf01002]
    108890455
Enzymes [BR:lcf01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.3  Carboxy- and carbamoyltransferases
    2.1.3.2  aspartate carbamoyltransferase
     108890455
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.2  In cyclic amides
    3.5.2.3  dihydroorotase
     108890455
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     108890455
Peptidases and inhibitors [BR:lcf01002]
 Cysteine peptidases
  Family C26: gamma-glutamyl hydrolase family
   108890455
 Metallo peptidases
  Family M38: beta-aspartyl dipeptidase family
   108890455
SSDB
Motif
Pfam: CPSase_L_D2 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter Amidohydro_1 RimK ATP-grasp_3 Peptidase_C26 GARS_A GSH-S_ATP
Other DBs
NCBI-GeneID: 108890455
NCBI-ProteinID: XP_018542839
UniProt: A0A4W6DEP5
Position
LG7_1:complement(3367180..3385365)
AA seq 2236 aa
MAKMATLILEDGATFRGRLFGANVSVSGEVVFQTGMVGYPEALTDPSYRCQLLTLTYPLV
GNYGVPKDEEGEFGLSKWFESSKIHAAALIIGELSDSPSHWSSVKSLDQWLKEQGVPGLQ
GIDTRCLTKKIREKGTMLGKLVVDETPEDSIPFDNPDQRNLVQEVSMKEPRVFNPSGSLR
ITVVDCGIKYNQIRCLAERGARVTVVPWDHPLDSTDFDGLFLSNGPGDPQLCQATINNVR
KVVCVDRPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGF
AVDPDTLPKDWDVLFTNANDHSSEGIVHNTQPLFSVQFHPEHMAGPTDLVSLFDVFLDAV
KDHKEGSATRSVKQRLMDHLTFPGSPKPEEVFRPRKVLILGSGGLSIGQAGEFDYSGSQA
IKALKEENIQTVLINPNIATVQTSKGLADKVYFLPITPEYVTQVIKNERPDGVLLTFGGQ
TALNCGVELTKLGVLEKYKVKVLGTPVASIEMTEDRKIFVEKMEEINEHVAPSEAALSVE
QAVAAAERLGFPVLVRSAFALGGLGSGFANNKEELTSLVTSAFAHTSQVLVDKSLKGWKE
IEYEVVRDAYDNCVTVCNMENIDPLGIHTGESIVVAPSQTLNDREYNMLRNTAIKVIRHL
GIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPQLK
NSVTNSTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQK
ALRMVDENCVGFDHTIKPVSEKELQTPTDKRIFVLAAAFRAGYTVDQLYELTKIDRWFLH
KMKNIADHERLLETYNQDESAMPPEVMRKAKQLGFSDKQIALAVQSTELVVRKLRHDWSI
LPVVKQIDTVAAEWPAHTNYLYLTYHGMENDLSFSDQHVMVIGSGVYRIGSSVEFDWCAV
GCITELRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYERENPEGVILSMG
GQLPNNIAMSLHRQQCRILGTSPEFIDCAENRFKFSRMLDTIGISQPQWKELSDTESAVK
FCETVGYPCLVRPSYVLSGAAMNVAYSDSDLEKYLSNAVAVSKEHPVVISKFIQEAKEID
VDAVACDGVVMAIAVSEHVENAGVHSGDATLVTPPQDLNQKTIERIKMIVHAIGQELQVT
GPFNLQLIAKDDQLKVIECNVRVSRSFPFISKTLGVDLVALATRAIMGEEVEPVGLMRGK
GIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNIL
LSIGSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVTAVDWPFEEEEDSECPT
KEKQRSIMNYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCT
KLFVQALRQIGSTPPVKTHIDSMTSQTLVRLPGLIDVHVHLREPGATHKEDFSSGTAAAL
AGGVTMVCAMPNTSPAVTDPSTLALVQKLAKAGCRCDYALYVGAASDNAAVLPSIASQAA
GLKMYLNDTYSTLKMDNVSLWMEHFEKWPKQMPIVAHAEKQTVAAILMVAQLYQRPVHIC
HVAKKEEILIIRAAKQKGIQVTCEVAPHHLFLCEENVSEIGDGRAQVRPMLGTREDMEAL
WENLDIIDCFATDHAPHSVEEKNGERPPPGYPGLETMLPLLLTAVSDGRLTLDDIIRRLY
DNPRKIFNLPVQENTYVEVDLEQEWVIPQAMQFTKSKWTPFQGLKVKGKVRRVVLRGEVA
YIDGQVLVPPGYGEDVKTWPAASVHPAEPVKESPMTPEHPRPTPPREGLVRTRAPSPRRS
AGEGRYLLPPRVHRSSDPGLPPEMIVLPPVCAGDMGYSHPPPLSRLLSPQSGPGQIPAGQ
VSHFQTSPLLHLLVGQHILSVRQFSKEQISHLFNVAHTLRLLVQKERSLDILKGKVMASM
FYEVSTRTSSSFAAAMQRLGGSVVHFSESTSSTQKGESLADSVQTMSCYADVLVLRHPTP
GAVESASRHCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMVGDLKHGRTVH
SLAKLLTQYRITLRYVAPKNLHMPAEIISYVASKGIKQEEFESIEEALPETDVLYMTRIQ
KERFASEEEYKACFGQFILTPHIMTVAKKKMVVMHPLPRVNEISVEVDTDPRAAYFRQAE
NGMYIRMALLATVLGR
NT seq 6711 nt   +upstreamnt  +downstreamnt
atggcaaagatggcaaccttgattttggaggacggggcgacgttcagaggccgccttttt
ggagcaaacgtgtcggtgtcgggggaagttgtgtttcagacaggtatggtcggttaccct
gaggctctcactgacccatcctaccgctgccagctgctcaccctcacttatcccttggtg
ggcaactatggggtgccaaaggacgaggagggagagtttggactgagcaagtggtttgag
tcgtccaagatccacgctgctgctctgattatcggagagctgtcggacagtcccagccac
tggagttcagtcaagtcactggaccagtggctcaaagagcaaggtgttcctggattacaa
ggcattgacacccgctgtctgaccaaaaagatccgagagaagggcaccatgctggggaag
ctggtggtggacgagactcctgaggacagtattcccttcgataaccccgaccagaggaac
ctggtccaggaggtctccatgaaggagccgagagtattcaaccccagtggtagtctgcga
atcacagtggtggactgcggcatcaaatacaaccagatccgctgcctggctgagagagga
gcccgtgttactgtggtgccctgggaccacccattggacagcacagattttgatggtttg
ttcctcagtaacggacccggggatcctcagctctgtcaggccaccatcaacaacgtgagg
aaggtggtctgcgtggatcgcccgaagccggttttcggtatctgcctcggacaccagctg
ctctctttggtcatcggagcaaagacctacaagatgaagtacggtaaccgtggccacaac
cagccctgcatccacaagggaacagatcgctgcttcatcaccagtcaaaaccacggtttc
gccgttgaccccgataccctgccgaaagactgggacgtcctctttaccaacgccaacgat
cacagcagtgagggcattgtacacaacacacaacccctgttcagtgttcagttccacccg
gagcacatggccggacccacagacctggtcagcttgttcgacgtcttcctcgacgctgtg
aaagaccacaaggagggcagcgctacaagatcagtcaagcagcgtctgatggatcacctc
accttcccgggttccccgaagcctgaagaggtattccgacccaggaaggtcctcatcctg
ggctctggaggactgtccatcggccaggccggagagtttgattactccggctcacaggct
attaaagctctgaaggaagagaacatccagactgtgctgatcaaccccaacatcgccact
gtccagacgtccaaaggcctggctgacaaagtctacttcctgcccatcactccggagtat
gtcactcaggtaataaaaaatgaacgtccggacggtgttctgttgaccttcgggggtcag
accgctctgaactgtggcgtggagctgaccaagctcggcgtcctggagaagtataaagtg
aaagttctgggaacgccggtggcctccatcgaaatgacggaggacaggaagatctttgtg
gagaaaatggaagagatcaacgaacatgtcgctcccagtgaagcagcgctgtctgtagag
caggctgtggcagctgcagaacgtctaggcttccccgtcctggttcgctcagctttcgct
ctcggcggtctgggatccggctttgccaacaacaaagaggaactaacatctctggtgacg
tcggcctttgcgcacacctcccaggttctggtggacaaatccctgaaaggctggaaggag
atcgagtacgaggtggtccgagacgcctacgataactgtgtcactgtgtgtaatatggag
aatattgaccctctgggcatccatactggggagtccatcgtggtggcgcccagtcagacg
cttaacgaccgcgagtacaacatgctgaggaacacagctatcaaagtcatcaggcacctg
ggcatcgtgggggagtgtaacatccagtacgctctcaaccccgagtcggaacagtactac
atcatcgaggtgaatgcccgtctgtcgaggagttcggccctggccagtaaggcgacaggt
tatcctctggcctatgtggcggctaaacttggcctggggatcccgctgccgcagctcaag
aactctgttaccaactcgacgacagcgaactttgagcccagtctggactactgcgtggtg
aaggtgcctcgctgggatctcagcaagttcctcagggtttccaccaagatcggcagctcc
atgaagagtgttggtgaggtgatggctatcggccgtagctttgaggaggccttccagaaa
gctctgaggatggtggatgagaactgtgtgggctttgaccacacgatcaaaccggtctct
gaaaaggaactgcagactcccacagacaagcgtatctttgtgttggcggcggcgttccga
gccggctacaccgtggaccagctgtatgagctgacaaagatcgaccgctggttcctgcac
aagatgaagaacatcgccgaccacgagcggctgctggaaacttacaaccaggatgagagc
gccatgcctccagaggtgatgcgaaaggccaagcagctgggtttctcagacaagcagata
gcactggctgtgcagagcacagagctggtggtgagaaagctacgtcacgattggtccatc
ctacctgtcgtgaagcagatcgacaccgtggcggctgaatggcctgcccacacaaactac
ctgtatctgacctaccatggcatggagaacgacctgagctttagcgaccagcacgtcatg
gtgatcggctctggcgtgtatcgtatcggcagcagcgtggagtttgattggtgcgcggtg
ggctgcatcacagagctcaggaagatgggttataagaccatcatggtgaactacaaccct
gagacagtcagcacagactacgacatgtgtgaccgcctctactttgatgaaatctccttt
gaggtggtgatggacatctacgagagggaaaacccagagggagtgatcctgtccatggga
ggccagctgcccaacaacatcgccatgtcgctgcaccgtcagcagtgtcgcatcttggga
acttcgcccgagttcatcgactgcgccgagaacaggttcaagttttcccgaatgctcgac
accatcggcatcagccagccacagtggaaggagctctctgacactgagtctgctgtgaag
ttttgtgagacagtgggttatccctgcctcgttcgtccctcctacgttctcagcggagca
gccatgaacgtggcctacagcgacagcgacctggagaaatacctgagtaatgctgtcgct
gtgtccaaggaacaccctgttgtcatctccaaattcatacaggaagccaaggagatagac
gtggacgcagtagcatgtgatggggtggtgatggccatcgccgtgtccgaacacgtggag
aacgccggcgttcactccggcgacgccacactggtgacgccgcctcaggatctcaatcag
aagaccatcgaaaggatcaagatgatcgtgcacgccatcggccaggagctgcaggtcacc
ggacccttcaacctgcagctgatcgccaaggacgaccaactgaaggtgatcgagtgcaac
gtccgagtgtcccgctccttcccctttatatccaaaaccctgggtgtggatcttgttgcc
ctggcaacgcgggccatcatgggggaggaggtggagcctgtgggcctaatgagaggaaag
ggaatcgtaggagtgaaggttcctcagttctccttctctcggctggcgggagccgacgtg
gtgctcggggtggagatgaccagcaccggagaggtcgcttgttttggggagaacagatac
gaggcgtatctcaaagccatgctctccacaggcttcaagatccccaagaagaatatcctg
ctctccattggcagctataagaacaagagcgagctgctgcccactgttcaggctctggag
tctctgggttacgacctgtacgccagcctgggcactgctgatttctacacagaacacgga
gtcaaggtgacagcagtggattggcccttcgaggaggaggaagacagcgaatgccccacg
aaggagaaacagcgcagcatcatgaactacctggaagaaaaccactttgacctggtcatc
aacctctccatgaggaacagcggcggtcgcaggctctcctccttcgtcaccaaaggctac
aggacgagacgcatggccatcgactactctgtcccgctcatcatcgacatcaagtgcact
aagctctttgttcaggctcttcgtcagatcggcagcactccaccagtgaaaactcacatc
gacagcatgacgtcccagacgctggtccgtctccccggcctgatcgacgtccatgttcat
ctgcgggagcctggtgctacacataaggaggacttctcctctggtacggcagctgctctg
gcaggaggagtgacgatggtgtgtgcgatgcccaacacgtccccggccgtcactgatccc
agcactctggctctggtgcagaagttggccaaagctggctgcagatgtgactacgccctg
tacgtgggcgctgcttcagacaacgccgccgtcctgccgtccatcgctagccaggctgcc
ggcctgaagatgtacctgaacgacacctactccaccctcaagatggacaacgtctctctg
tggatggagcactttgagaagtggcccaagcagatgcccatcgtagctcacgctgagaag
cagacggtagctgcaatcctgatggtggctcagctctaccagcgaccggtccacatctgc
cacgtggccaagaaggaggagatcctgatcatccgtgctgccaagcagaagggcatccag
gttacgtgtgaggtggcgcctcatcacctcttcctgtgtgaggaaaacgtgtctgagatt
ggcgacggacgagcgcaggtccgacccatgctgggcacacgcgaggatatggaggcgctc
tgggaaaacctggacatcatcgactgctttgccacggaccacgctcctcactctgtggag
gagaagaacggggagcgtcctcctccaggttaccccggcctggaaacgatgctgccgctg
ctgctgaccgccgtcagtgacggacgtctgactctggatgacattatcagacgtctgtac
gacaacccgcgcaagatcttcaacctgcctgtccaggaaaacacctacgtggaggtggac
ttggagcaggagtgggtcattcctcaggccatgcagttcaccaagtccaagtggactcct
ttccaaggtctgaaggtgaaggggaaagtccgccgcgtggtcctacgaggagaggtggct
tacatcgatggacaggtgttggtacctcctggttatggtgaagatgtgaagacgtggccc
gctgcttctgttcaccctgcggagcctgttaaagaaagccctatgactccagagcatcct
cgtcccactcctccccgcgaaggcttggtccgaacccgagcaccgagcccgcggcgctcc
gcaggagagggacgatacctgctgccgccccgcgtccaccgctcctctgatcctggactc
ccaccagagatgatcgtgctgccaccagtctgtgccggtgacatgggttacagccaccct
cctcctctgtccaggctgctgtcccctcagtcaggaccgggtcagatacctgctggacag
gtgtcccacttccagacctctcctctcctgcacctgctggtcggccagcacatcctgtct
gtcaggcagttcagcaaagaacagatctcacaccttttcaacgtcgcccacactttgcgt
ttgttggttcagaaggagcgaagcctggacatcctgaagggtaaggtgatggcgtccatg
ttctacgaggtcagcactcgcaccagcagctccttcgctgcggccatgcagcgtctgggc
ggctcggtcgtccacttcagcgaatccacctcgtccacgcagaagggagaatcgctggcc
gactctgttcagaccatgagctgctacgctgacgtcctggtgctccgacacccgacgcct
ggagctgttgagagtgcgtctcgtcattgccgtaaaccggtgatcaacgctggagacggt
gtcggggagcatccgacccaggccctgctggacgtcttcaccatcagagaggagctgggg
acggtcaacggcatgacgataactatggtcggagatctgaaacacggccgcacggttcat
tccctcgccaaactcctgacgcagtaccgcatcaccctgcgctacgtggctcccaaaaac
ctccacatgccagcagagatcatcagctacgtggcctcgaagggcatcaaacaggaggag
tttgagagtattgaagaagctctgcctgagactgacgtcctctacatgaccaggatccag
aaggagcggttcgcatctgaggaggagtacaaggcctgtttcggtcagttcatcctcact
ccccacatcatgactgtggccaaaaagaagatggtagtgatgcatccgctgcccagagtc
aatgaaatcagtgtggaggtggacacggacccgagagcagcgtatttccgtcaggcggag
aacggcatgtacatccgcatggccctgctggccaccgtactgggcagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (14)   
   KEGG COMPOUND (14)   
Chemical reaction (10)   
   KEGG ENZYME (3)   
   KEGG REACTION (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (78)   

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