KEGG   Lates calcarifer (barramundi perch): 108892437
Entry
108892437         CDS       T04895                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
  KO
K10625  E3 ubiquitin-protein ligase UBR1 [EC:2.3.2.27]
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108892437
Enzymes [BR:lcf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108892437
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   UBR box proteins
    108892437
SSDB
Motif
Pfam: PRT6_C zf-UBR ClpS zf-RING_5
Other DBs
NCBI-GeneID: 108892437
NCBI-ProteinID: XP_018545488
Position
LG19:complement(11531904..11547405)
AA seq 1743 aa
MAETEKSQDGLELSKEWLDAADSRAELLHYLKEQVPQIFCLKKESNPQEEEELTQSRLLH
PLECFLFGEDPQEGLEKLKHSSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDS
VHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKHDPGAATAMVTDECVLEPELYERAEK
LFRVLLRYVTDFLVWEETFELPAELQPRYGPTDAYYCVLYNDEHHSYDHVIYTLQRSVNC
DQTEAQTHTALIDKEGRRAVKRGTFLSCQDAKDLIRTNSEHISLQPLRVEILHAAVMAHQ
TFALRLGAWFQKIISYSVGFRQAFCQVALEPNTDRDHPCLISTLMLHDARMYKGARKIVH
ELIFCSMLMETEFKRLFAIEFTKHYKQLQKDFINDDHERSISITALSVQIFTVPTLARQL
IEEGNVIKVVVDTVMELLHEHLDETNRFYFQGYNSDKFSRIQVIFHDLRYILISKPSIWT
EDLRRQFLEGFKVFLGLLKCMQGMEEVKRQFGQHIAVEPEWEAGFSLQIQLRHILAMFQD
WCSSDDEILLLAFKECHEILMQCNNQPFHREATDYYMCKNILHVRPYKVSQEPVSIHLPI
SRLLAGLYVLMCRTGAIEHLDNPESYDYTQLAEYPLRCVVLAAQVSAEMWRRNGLSLVSQ
VYYYQDVKCRDEMYDKDILMLQIAASKMDPNHFLMLILLRFELFDFFNGNCSSKDQDELI
QWNRLTEEMLYLLIVIVGERYVPGISQVTKEDVTMREVIHLLCIEPMAHSSLVKGLPENE
SHETGLETVIAKVATFKKPGVSGHGLYEVKKERLVEFNPFFYHYSRSQHSKAEESQKKRR
TQEGNDKALRPPVPPAFCPGFSNIVRLLCCDIIIHILRRVLLRAAEDRATLWTEAMIQRA
LHLIGQALLEEKTQLEDSSVEEVTFDFSLKARRIGSEQSKSVFLLLSKIKALPSLEAQKD
MVKWVLQMFEIVKCLREKSSPTASMSVETTKPEESAQDKEKAERKRKAEAAKLHRQKIMA
QMSAMQKNFIESNKMLYENMPDSGMQGEPVATTESCAMEQRELCVAIGPHRGSTPPEREV
LTCILCQEEQEVVAQAPAMVLTACVQRSTVLTQCRGKIPTNRADGSGTSYPLFMPPELAV
GTHTGSCGHVMHATCWQKYFEAVQNTTRNRLHAELIIDLENGEYLCPLCKSLCNTVVPLI
PLEPLTFNYENAEIIGQHLTMPRWIQILSARIKGLKSVTQDNDSNTEGNSGDGDTMALCG
EGQPDFRSILSYGVQEPRKFSDSIAEMLVVCATTVHRVGLQTAPNELCPRVPLMAWNTCA
FTIQAIENILQEEDKSLFGSLQNRQLAGLKAIVQFSASQRLKSSQAVIQRHFTDMLGVLL
PVMSRKNTPSVLEVDFFHLLVGLVLSIPSLYQEEAVDLQPSAVSSAYNHLHILHLVTMAH
MLQILLSSTDFNAVAGGEETEEARAAAELYNTVSQHTGRLVPDVSGSSVAERVKRGIEPF
LRCAALFFNCLTGVHPPEELFGTSITSQGQMEALCSYLALPSNVFQLFQEHRDTVNPLLQ
RWCGSSAITKALKGKTQTVRYPRRRNRLIDLPEDYSALLNQASHFQCPKSTDDERKHPTL
CLFCGTMLCSQSSCCLSQLDGEDVGACTAHAATCGAGVGMFLRIRECEIVLMASKTRGST
YPAPYLDDYGETDPHLGRGNPLHLCPERYRKLNQLWQQHCILEEIARSLEVVNVMFAFEW
QML
NT seq 5232 nt   +upstreamnt  +downstreamnt
atggcggagactgagaaatcccaagacggactggagctcagcaaggaatggctggatgct
gcagacagcagggcggagctgctccactacctgaaggagcaggtgcctcagatcttctgt
ctgaagaaagagtccaaccctcaggaggaagaggagctcacgcagagccgactcctccac
cctctggagtgtttcttgtttggagaagatcctcaggagggtctggagaagctcaagcat
agcagcacctcctcccagctctgtggacgtgtcttcaaagagggagagactgtctactct
tgcagggattgtgcaatagatcccacttgtgtcctgtgcatggattgcttccaggatagt
gtgcacaaaagccatcgttacaagatgcacgcgtcatcaggcggggggttctgtgattgt
ggggatgtagaagcctggaagattggcccctgttgctccaaacacgacccaggggcagcc
actgccatggtaacggatgagtgtgtgttggagcctgagttatatgagcgtgctgagaag
ctgttccgggtactgctgcgctatgtcacagatttcttggtgtgggaggaaacctttgag
ctaccagctgagctccagccccggtacgggccaactgatgcatactactgtgtactgtac
aatgatgagcaccactcctatgaccatgtgatctacaccctgcagcgctctgttaactgt
gatcagactgaagcacagacacacacagctcttattgataaggagggtcggcgtgcagta
aagagaggaacctttctttcctgccaggacgcaaaagaccttatcaggaccaactctgag
cacatttccctgcagccactgcgtgtggagatccttcacgcagcagtaatggctcatcag
acgtttgctctgcgtctcggcgcctggttccaaaagatcatcagttactcagttggcttc
aggcaggcgttctgtcaggtggcactagagccaaacacagatagagaccacccttgtcta
atcagcacactcatgctgcacgatgccaggatgtacaaaggagctcgcaagatagtacat
gagctgattttctgtagcatgctaatggagacggagttcaagaggctttttgcaattgag
tttacaaagcactataagcagctgcagaaggatttcatcaatgatgaccatgagaggagt
atatccatcactgctctgtctgttcagatcttcactgtgcccacactggccagacagctg
attgaagagggtaatgtcattaaggtggtagttgataccgtcatggaattgctacatgag
catctggacgaaaccaatcgcttctacttccagggctacaactcagacaagttctcacgc
atccaggtcatcttccacgacctcaggtatattctgatcagtaaaccctcaatatggact
gaagacctgcggagacagttcctagaggggttcaaagtttttcttgggcttctcaaatgc
atgcagggtatggaggaggtgaagcgccagtttgggcaacacattgcagtagagccagaa
tgggaagctggcttttctcttcagattcagcttcgccacattcttgccatgtttcaggac
tggtgttcctctgatgacgagatcttgctgcttgcgtttaaagagtgccacgaaatcctg
atgcagtgcaataaccagcccttccatagagaggccactgactactacatgtgcaagaac
atcctccatgttcgtccgtacaaagtgtctcaggagcctgtcagcatacatctgcccatc
tccaggctactggctggactgtatgtacttatgtgcagaacaggggcaattgaacatctg
gataatcctgagagttatgactacacccagctggccgaatatcctctgcgctgtgtggtg
ctggctgctcaggtctcagccgaaatgtggcggaggaatgggctttcactggtcagccag
gtctactactatcaggatgttaaatgcagggatgagatgtacgataaggacattctcatg
ctacagatagctgcttccaaaatggaccccaaccacttcctcatgctgatcttattgaga
tttgagctctttgatttttttaatggaaattgttcaagcaaagaccaggacgaattgata
cagtggaatcgattgacagaagagatgctttacctcctgatcgtcatcgttggtgagcgc
tatgtccctgggatcagtcaggtgaccaaagaggatgtgacaatgagggaagttatccac
ttgttgtgcatcgagcccatggcgcatagtagcctggtcaaaggcctgccagagaatgaa
agccacgaaacaggcctggagacagtaattgccaaagttgccacctttaaaaaaccagga
gtatcaggacatggactatacgaagtaaaaaaggagcgtctggtagaattcaaccctttc
ttctaccattattcaagatcccagcatagcaaggcagaggagtcgcagaagaagagaagg
actcaggagggtaatgataaagctcttcgtcctccggtgcctccggccttctgcccaggt
ttctccaacatagtgcgtctgctctgctgtgatattatcatccacatcctgagacgtgtc
ctgctgagagctgcagaggaccgggcgactctctggacagaggccatgatccagagggcc
ctgcacctgattggtcaggcattacttgaagagaaaacacagcttgaggacagcagcgtg
gaggaagtgacctttgatttcagcctgaaagctcgcagaattggttcagaacaaagcaag
tcagtgttcctcttgttgtccaagattaaggctcttccttcccttgaagctcagaaagac
atggttaaatgggttctacagatgtttgagattgtcaagtgcctcagggagaagtccagt
ccaacagcatccatgagtgtggagacaaccaagccagaagagagtgctcaggacaaagag
aaagctgaacggaaaaggaaggcagaggcagccaaacttcaccgccagaagattatggcc
cagatgtcagcaatgcaaaagaacttcattgagtcaaacaagatgctgtatgagaacatg
cctgacagtgggatgcagggagagcctgttgcaactactgagagctgtgccatggagcag
agggaactgtgtgtagccattgggccccacagagggtcaaccccacctgagagggaggtg
ctgacctgcatcctttgccaggaggagcaggaagtggtggctcaggctccagccatggta
ctgaccgcatgtgtccagaggtccacagtgctgacacagtgcagaggaaagataccgacc
aacagagcagatgggtcggggacatcatatcctctgttcatgcctcctgaacttgcagtg
gggacccacactggcagctgcggacatgtcatgcatgccacatgttggcagaaatacttt
gaggcagtccagaatacaaccaggaaccggctccacgctgagctgatcatcgacctggag
aatggggagtacctatgtcccctgtgcaagtctctgtgcaatactgttgtccctctcatc
ccactggaaccactaacatttaactatgagaatgcagagataattggacagcatttgact
atgcctcgctggatccagatcctctctgccaggattaaaggactcaagtcagtcactcag
gataatgattccaacacagaaggcaacagtggtgatggggacacgatggccctgtgcgga
gagggccaaccagactttagatccattctcagctatggagtacaagaaccgaggaagttc
tcagacagcatagcggagatgctggtcgtgtgcgccaccacagtccacagggtgggacta
caaacagcgcccaatgagctgtgtcctcgtgtgccccttatggcttggaacacatgtgcc
ttcaccattcaggccatagaaaacatattgcaggaagaggacaaatcgctctttgggtcc
ttacaaaatagacagcttgcaggtctaaaggcaatcgttcagttttcagcatcacagaga
cttaagagctctcaggctgtaatccaaaggcatttcacagacatgctgggggtcttgcta
ccagtcatgagcagaaaaaacaccccctcagttctggaggtggacttcttccatcttctg
gtgggattggtgttgtctataccctcactgtaccaggaggaggctgtagacttacagccg
tctgctgtcagctctgcctacaaccacctgcacatcttgcatctggttaccatggcgcac
atgttacagatcctcctgtcctctacagatttcaatgcagtggcaggtggggaggagaca
gaggaggcgagagcagcagcagagctgtacaatacagtgtcgcaacacactggaaggctg
gttccagatgtgtccggcagctctgtggcagaaagagtgaagagaggaattgaacctttc
ctgcgctgtgctgctctatttttcaactgccttacaggagtacatcctccagaggagctt
tttggtacctctattacctctcaaggacagatggaggcactatgcagttacctggcacta
ccctccaatgtgttccagctcttccaggagcatagagacactgttaatccactgctgcag
aggtggtgtgggagctcagctataaccaaagccctgaaaggcaaaacccagacagtcaga
taccccaggagaaggaatcgtttgattgatcttcctgaggattacagtgctctcctcaat
caagccagccattttcagtgtcccaagtctacagatgatgaaaggaagcacccgaccttg
tgcctgttctgtgggaccatgctgtgctctcagagctcctgctgtctcagccagctggat
ggggaggatgttggcgcatgcaccgcccacgctgccacctgtggtgctggtgtgggaatg
ttcctcaggataagagagtgtgaaattgttctgatggccagtaagactcgaggaagcacg
taccctgctccttacctggatgattatggggagactgatcctcatcttggaaggggcaat
ccactgcatctttgcccagagcgctacaggaagctgaaccagctgtggcagcagcactgc
atcctggaagaaatcgctcgcagcctggaggtggtcaacgtgatgtttgcttttgagtgg
cagatgttgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (48)   

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