KEGG   Lates calcarifer (barramundi perch): 108892465
Entry
108892465         CDS       T04895                                 
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
  KO
K20721  reticulon-1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108892465 (rtn1a)
   03036 Chromosome and associated proteins [BR:lcf03036]
    108892465 (rtn1a)
Membrane trafficking [BR:lcf04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    108892465 (rtn1a)
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    108892465 (rtn1a)
SSDB
Motif
Pfam: Reticulon DUF4736
Other DBs
NCBI-GeneID: 108892465
NCBI-ProteinID: XP_018545540
UniProt: A0A4W6FJ04
Position
LG19:complement(11823707..11843618)
AA seq 739 aa
MSAQPGEELGSEGKWFGDDYERNGLFGNTPTRFDELREEFKPRGGEAESDLDQQFHPFQD
YGKRPPVAMETASTDDSMSGLFRKPMNDDGDVYTSLLSNQSFTSGREASYLSEDLKPSKP
STGSSALDHFSSDSYSFGSSTKMTSDLVDDMPKSLLGSDKTESYNYMDISHGDERHDQHQ
GAQHSLVDTSLAGRDLLGSYIDKNPGRDEEDEEEEEEENLGPALGSHSFPYVEEPSDEEL
SDYRSYRNLGGTPQTASPVKITLTESQPPPASKAELQQHPSPVSGSERENVLSVGLQGVP
TVTLSEPEDESPASTPNASPTQKEFSSHDIFKADAAKPAASKSGPGTKAGSGEHDGSSAE
SGDSEIELVSEEPPKASSNPFAQPPKSKGTFSQPNNPFDNPPVAKGGFGLAGNHAPPTAY
SILREEREAELDSDLFIESASEESPKREQGFSGPKQGVSPPSPLVPSVVPPRSTAEAAPA
ESLITTEKVKTPVKTEEDRPSKPKPPTAAVPPEVRLEKPHQDDMHKNTSEGKGDLGKPAT
SMFLEGFNKQKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATIS
FRIYKSVLQAVQKTDEGHPFKAYLEMEIALSQDQISKYADKILLYTNTCMKELRRLFLVQ
DLVDSLKFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQV
NSVVGKIQAKIPGAKRKEE
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgtctgctcaacccggtgaggagctaggctcggaagggaagtggttcggggatgactat
gagaggaacggcctgtttggtaacacaccgacccggttcgacgagctacgtgaagaattc
aagccgagaggcggcgaggcggagagcgacctggatcaacaatttcatccttttcaggac
tacgggaaaaggcctcccgttgctatggaaactgcatctacagatgactccatgtcgggc
ctgttcaggaagcctatgaatgatgacggtgatgtgtacacttccctgctgtccaatcag
agcttcacatcgggccgggaagcctcctacctatcagaagacttgaagccctccaagccc
tccactggctcatctgccttggaccatttctccagcgactcctacagcttcggctccagc
accaagatgacttctgaccttgttgatgacatgccaaaatctctgctgggctcagacaag
acagaatcctacaactacatggacatcagccacggggatgagcgccacgatcagcaccag
ggggctcagcacagcctggtggacacgagcctggctggtcgtgacttgctgggaagctac
atagacaagaaccctggcagagatgaggaggatgaggaggaagaggaagaggagaacctt
ggtccagcactgggctcccattcctttccctacgtggaagagccatctgatgaagagctg
tcagattatcgctcctaccgaaacctgggcggcaccccgcaaacagccagcccggtgaag
atcaccttgaccgagtcccagcctcctccagcttccaaggctgagctgcagcaacacccc
tctccagtcagcgggtctgagcgtgaaaacgtactcagtgtgggcttgcagggggttcct
actgtgacactatcagagccagaggatgagagccctgcttccactcccaacgcttcgcca
acacagaaagaattctcttcccatgacatattcaaggctgatgcagcgaagcctgcagct
tccaaaagcggtccaggcacaaaggccggcagcggggagcacgatggcagcagtgcagag
tctggagactcagagatcgagctggtgtctgaggagcctcccaaggccagtagcaaccca
tttgcccagccgcctaaaagcaagggcactttcagccagcctaacaacccgtttgacaat
ccccctgtcgccaagggtggttttggcctggctggcaaccacgctccacctacagcctac
agcattctgagggaagagagagaggcagagcttgacagtgatctcttcattgagtctgca
tcagaagagagcccaaagagagagcagggcttcagtggccccaaacagggagtcagccct
ccctctcccctggttcccagcgtcgtccctccccgcagcacggctgaggcggcgccagct
gaatccctgatcacaacagaaaaggtcaagaccccagtgaaaacagaggaggatcgcccc
agcaagcccaagcccccaactgcggctgtgcccccagaggtgcgattggagaagccccat
caggacgacatgcacaagaacaccagtgagggcaaaggagatcttggaaaacctgctaca
tcaatgtttctggagggctttaacaaacaaaaagcgattgacctgctctactggaggaat
gtgaagcagtctggggccgtgttcagcagcgtgcttctgctcctcttctccctgacccag
ttcagcgtggtcagcgttggagcctacttagccctggcagctctctctgccaccatcagc
ttcagaatctacaagtctgtgctgcaggctgtgcagaagaccgatgaggggcatcctttc
aaagcctacctggagatggaaatcgctctgtcccaggaccagattagtaaatatgccgac
aaaatcctgctgtacaccaacacctgtatgaaggagctccgcaggctgttcctcgtgcaa
gatctggttgactccttaaagtttgctgttctgatgtggctgctgacctatgtgggcgct
ctcttcaacggcctgacactgctcatcctagctgtggtctccatgttcaccatgcctgtg
gtttatgagaaacatcaggcacagatcgatcaatacgtgggactaatacggacccaggtc
aactctgtggtggggaagatccaggcgaagatccccggggccaagaggaaggaggagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (46)   

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