KEGG   Lates calcarifer (barramundi perch): 108894877
Entry
108894877         CDS       T04895                                 
Name
(RefSeq) neural cell adhesion molecule 2 isoform X1
  KO
K06491  neural cell adhesion molecule
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03265  Virion - Ebolavirus and Lyssavirus
lcf04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus and Lyssavirus
    108894877
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108894877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108894877
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lcf04515]
    108894877
   04090 CD molecules [BR:lcf04090]
    108894877
   00536 Glycosaminoglycan binding proteins [BR:lcf00536]
    108894877
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lcf00537]
    108894877
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    108894877
Cell adhesion molecules [BR:lcf04515]
 Immunoglobulin superfamily
  NCAM1/2
   108894877
CD molecules [BR:lcf04090]
 Proteins
  108894877
Glycosaminoglycan binding proteins [BR:lcf00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   108894877
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:lcf00537]
 Others
  108894877
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Ig_C17orf99 Pur_ac_phosph_N Ig_6 C2-set Adeno_E3_CR1 Herpes_gE_N Tissue_fac
Other DBs
NCBI-GeneID: 108894877
NCBI-ProteinID: XP_018549019
UniProt: A0A4W6DHW2
Position
LG7_2:5085657..5332708
AA seq 870 aa
MLGGVLSAEHARWTSGERERAYRKEGKEGAEADQSPAEPKTADERSRACVSPLSIFTAAE
SSVRQRETCPKMMLKLVHFLGVLVCGSQAALQVSISLNKVELSVGESKFFICTAIGEPVR
LEWYNPQGERIVPSKRMALHTESSRSRLIIYNAIIEDAGIYRCQATDGSGHTEEASVVLE
IYQRLTFQDVESPQEFRYGETAEVVCDVISSPVPVVVWYYQDKEITEEHHSKFQVLANNN
LQIHQVTKADEGVYRCEASVEARGEIDFVDIAVVVNVPPVLSVSQQSFNATADYQESVTF
TCITSGSPDPVVTWHRKGQQLEPSEQYIFNRLEGGRSMLTIRNIRQGDGGTYSCKASNKA
GSQEGELFLKVFVQPHITLLKNVTAVEGSAAMISCVAEGEPLPDISWRRAKDGQPFVDGD
KSQDGRFEVRGRHGKSVLTISGVRLTDLGRFDCEALSRIGGHQKSMFLDIEYIPKFLTNH
TIYYSWEGNPVNISCDVMSNPPATMLWRRERFTISAEGTANTRVHSTEGKSVLEVTPMSD
RDFGRYNCTARNNIGVRYQEFILAQADVPSNPYSVRLSAVSQRLATVTFMKPDSHGGVPI
SYYLVQYKEVGSQDWRDVKSHSVQTTVVLTGLEPNTTYEVRVAAVNGKGQGEFSHTETFQ
TLPIREPSPPAVHGQRGMGKAYRLGLVKQDDGGMPIVEYIVKYKTDKEEQWMTKLVPGVN
DFAMLQPLQWNTRYEVEITARNVKGLSEPTFYQFFMPQKPDITAESLFSGLGLGAVVGLG
LGALLLLLVLVDVSCFFLRHCGLLMCITRTLCSKKTATSGKGKEIEEGKAAYLKLPLKEE
NGKESLKPDTIEIKVHSDNSIHTKPDDSKA
NT seq 2613 nt   +upstreamnt  +downstreamnt
atgcttgggggggtcctcagcgcagagcacgcacggtggacgagcggcgagcgggagcgc
gcgtataggaaggaagggaaggaaggagctgaggcagatcagtcgccagcggagcccaag
acggcggatgaacggagtcgagcgtgtgtgtcgcccttgtcgatttttacagcagctgaa
agcagcgtccggcagcgcgaaacctgcccgaaaatgatgctcaaactcgtccatttcctc
ggggtcctcgtctgcggcagccaagccgccctgcaggtgtccatatctttgaacaaagtg
gagttaagtgttggagagtccaaattcttcatctgcacagctattggcgagccggtgagg
ctggagtggtacaacccacagggcgagcgcatcgtgccctccaagcggatggcactccac
acggaatcatcacgatccaggctcatcatttacaatgcaatcatcgaggacgcgggtatc
taccgctgccaggccacagacggcagcggtcataccgaggaggcctcggtcgtgctggag
atctaccagaggctgacttttcaggatgttgagtcaccacaggagttccgctatggcgag
acagcagaggtggtgtgtgatgtcattagttcacctgtgcccgtggtggtgtggtactac
caggataaggaaatcactgaggagcaccatagcaagttccaggtgctggcaaacaacaac
ctgcagatccatcaggtgaccaaggctgacgagggcgtgtaccgctgcgaggcgagcgta
gaggcccgcggtgagatcgattttgtggacatcgctgtggtggtcaatgtgcctccggtg
ttgtcagtgtcccagcagtccttcaatgccacagctgactaccaggaatcagtcaccttt
acttgcatcacctctggatctcctgaccctgtggtcacatggcacaggaaagggcagcag
ctggagccatcagagcagtacattttcaacaggctggaaggtgggcgcagcatgttaacc
atccgcaacatccgacagggcgatggagggacctactcctgcaaggcctcaaacaaggca
ggatctcaggaaggagagctcttcctcaaagtgtttgtccagccccatatcaccctgctg
aaaaacgtgacagccgtggagggcagcgccgccatgatctcctgcgtggctgagggcgag
cctctgcccgacatttcctggaggagagccaaagacggccagcccttcgtggacggagac
aagagccaggacggacgttttgaagtccgcggtcgtcacggcaagtcggtgctgacaatc
agcggcgtgaggctcaccgacttgggtcgctttgactgtgaggcgctcagcaggatcgga
ggtcatcagaagagcatgtttctggacattgagtacataccaaagttcctgaccaatcac
accatctattattcatgggaggggaacccagtgaacataagctgtgatgtgatgtccaac
cctcccgccacaatgctgtggaggagagagcgcttcaccatctctgcagagggaactgcc
aacacgagggtacacagcacagagggcaagtctgtgctggaggtgactcctatgtctgac
agggacttcggccgttacaactgcacagccaggaacaacattggcgttcgataccaggag
ttcattctggcccaggcagatgtaccatcgaatccatactcagtgcgtctgtcagctgtc
tcccagcgcttggcgaccgtcaccttcatgaaaccggactcacatggcggcgtgcccatc
agctactacctggtccagtacaaggaggtgggctcacaggactggagggacgtcaagtca
cacagtgtccagacgacagtggtgctgacaggactggagcccaacacgacgtatgaggtt
cgagtggcagctgtcaatggaaaaggtcagggggagttcagccacacggagaccttccag
actttacccatccgagagccgagtccgccggcggtccacgggcagagaggaatgggcaag
gcctacaggctggggctggtcaagcaggatgatggagggatgcccattgtggagtatata
gtcaagtacaagactgacaaagaggaacagtggatgaccaagctggttccaggagtgaat
gattttgcaatgcttcagccgctgcagtggaacacaagatatgaagtggaaatcacagcg
cgcaatgttaagggcctgtcggagccgaccttctatcagttcttcatgccacagaaacct
gacattacagcagaatccctgttcagcggcctggggctgggggcggtggtgggcctcggc
ctgggagcgctgctgctgctcctcgtgctggtggacgtcagctgcttcttcctgcgtcat
tgcggcctgctgatgtgcatcacacgcacgctgtgcagcaagaaaacggccaccagcggc
aagggcaaagaaatagaggagggcaaagccgcctacctgaaactaccgctgaaggaagaa
aatggaaaagagtctctcaagccggatacgattgaaatcaaagtgcacagtgacaacagc
atccacacaaagcctgacgacagcaaagcgtaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (40)   

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