KEGG   Lates calcarifer (barramundi perch): 108895597
Entry
108895597         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit alpha-2
  KO
K04804  nicotinic acetylcholine receptor alpha-2
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    108895597
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:lcf04040]
    108895597
Ion channels [BR:lcf04040]
 Ligand-gated channels
  Acetylcholine (nicotinic)
   108895597
SSDB
Motif
Pfam: Neur_chan_memb Neur_chan_LBD
Other DBs
NCBI-GeneID: 108895597
NCBI-ProteinID: XP_018549988
Position
LG7_1:complement(12382907..12393431)
AA seq 555 aa
MGYNHLFSLGTTVVWSLLLSQSVLCQDKTHSHAEDVLFKKLFAGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWRPSDYDNVTSIRVPSELIWVPDI
VLYNNADGEFAVTHMTKAHLFHTGKIRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLERIENTVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLP
LFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVI
PLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDLIPRWLFMRRPAP
DGRRRRLLLLQQEAAAERRQGRISGYKSSNCLSTSANWLRDGTTLEDPERSCYEDLELGT
LTSYFSFRPPSPRPPGSTPPPQQKTPQNSQNRQEAARGTNRQITGTRDNPSQRPTKVDNT
VSDSTFLLSPSVIRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLL
GTIGLFLPPWLAGMI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgggatacaaccacctgttctctttggggacgactgttgtgtggtcgctgctcctctct
cagtcagttctctgtcaagacaaaacgcactcgcatgctgaggatgtgctcttcaagaag
ctgtttgctggttacaacaagtggtcgagacccgtgccaaacatctctgatgtggtgatc
gtcaagtttggactgtccatagcacagctcattgacgtggatgagaagaaccaaatgatg
acaaccaatgtgtggcttaaacaggagtggaatgactacaagcttcgctggagaccgtct
gactatgacaatgtgacgtccataagagtgccatcagagctcatatgggtgccagacatc
gtcctctataacaatgccgacggtgagtttgctgtgactcacatgacaaaagctcaccta
ttccacacgggtaaaatacgctgggtcccacccgccatttacaagagctcctgcagcatt
gacgtcaccttcttccccttcgatcaacagaactgtaagatgaagttcggctcttggacc
tatgacaaggccaagattgacctggagcgaattgagaacactgtggatctcaacaactac
tgggagagcggtgaatgggccatcatcaacgctgtgggaacgtataatacaaagaaatat
gactgctgccatgagatctacccggacatcacctacttcttcatcatccgaaggcttccc
ttattttacaccatcaacctcatcatcccctgtctgctgatctcctgcctcactgtattg
gttttctatctgccctcagactgcggtgagaagatcaccttgtgcatctcagtgctgctg
tccctcactgtcttccttctcctcatcacagagatcattccatccacatctctcgtcatc
cccctcatcggcgagtacctcctcttcaccatgattttcgtcaccctatccatcgtcatc
accgtcttcgtgctcaacgtgcaccatcgctcccccagcactcacaagatgccccgctgg
gtccactctgtgttcctggacctgatcccgcgttggctgttcatgcgacggcccgcgcca
gatggccggcgtcgcaggctgctgctgctccagcaggaggcggcagcggagcggcggcag
ggccggataagcgggtacaaatccagcaactgcctcagcacctcggctaactggctgaga
gacgggaccacattggaggaccctgagaggagctgttatgaggatttagagctgggaacg
ctgacgtcttatttctccttccgtcccccttcgcccagacctccagggtcgactcctccg
ccacaacagaaaaccccacagaacagccagaaccgacaggaagcagccagagggacgaac
agacagataactgggaccagagacaatccctctcagcggccaactaaagttgataataca
gtatcagactcaacattcctgctttcaccaagtgttatacgcgcattagaaggggtgcac
tatattgcagaccacctgagggctgaggatgctgacttcagtgtgaaagaggactggaag
tatgttgccatggtgattgaccgcatcttcttgtggatgttcattattgtgtgcctgctt
gggaccattggcctcttcctgcccccttggctagctggcatgatctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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