KEGG   Lates calcarifer (barramundi perch): 108895642
Entry
108895642         CDS       T04895                                 
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04145  Phagosome
lcf04210  Apoptosis
lcf04530  Tight junction
lcf04540  Gap junction
lcf04814  Motor proteins
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108895642
  09143 Cell growth and death
   04210 Apoptosis
    108895642
  09144 Cellular community - eukaryotes
   04530 Tight junction
    108895642
   04540 Gap junction
    108895642
  09142 Cell motility
   04814 Motor proteins
    108895642
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108895642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcf03019]
    108895642
   03036 Chromosome and associated proteins [BR:lcf03036]
    108895642
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108895642
   04147 Exosome [BR:lcf04147]
    108895642
Messenger RNA biogenesis [BR:lcf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108895642
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     108895642
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    108895642
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108895642
  Exosomal proteins of other body fluids (saliva and urine)
   108895642
  Exosomal proteins of colorectal cancer cells
   108895642
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 108895642
NCBI-ProteinID: XP_018550052
Position
LG7_1:complement(11755999..11759636)
AA seq 451 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLMSQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPSN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctcagtccacgtgggtcaggctggagtccagattggcaatgcatgc
tgggagctttactgcctggaacatgggatccagcctgatggtcagatgcccagtgacaag
accattggaggaggagatgattcttttaacaccttcttcagtgagactggagctggaaag
catgtccccagagctgtgtttgtagatctggagcccactgtcattgatgaggtgcgcact
gggacctacaggcagctgttccatcctgagcagctgatcactggcaaggaagatgctgcc
aacaactacgcccgtggacactacaccattggcaaagagatcattgacctggtgctggac
aggatccgcaaactggctgaccagtgcactggtcttcagggcttcctggttttccacagc
tttggaggtggtactggttctggtttcacctccctgctgatggagcgtctgtccgtcgac
tacggcaagaagtctaagctggagttctccatctacccagctccccaggtgtccactgct
gtggtggagccttacaacgccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtggataacgaggccatctacgatatctgtcgcaggaacctggatatcgag
cgtcctacctacaccaacctgaacaggctgatgagtcagattgtgtcctccatcactgct
tctcttcgttttgacggtgcccttaatgttgatctaacagagtttcagaccaacttggtg
ccgtatccccgcatccacttccctctggccacctatgcccctgtcatctctgctgagaag
gcttaccacgagcagctgacagtggcagaaatcaccaacgcctgctttgagccgtccaat
cagatggtaaaatgcgaccctcgccatggcaagtacatggcctgctgccttttgtaccgt
ggtgatgtggtgcccaaagacgtcaacgctgccattgccaccatcaaaaccaagcgcacc
attcagtttgtggactggtgccccaccggtttcaaggtcggcatcaactaccagccgccc
accgtggttcctggtggagacctggccaaggttcagagggctgtgtgcatgctgagcaac
accactgccatagcagaggcctgggctcggctcgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtaggtgaaggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattatgaggaggttggagttgactctgtt
gagggtgagggagaggaggagggtgaggagtattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (393)   
   KEGG ORTHOLOGY (1)   
   RefGene (389)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (414)   

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