KEGG   Lates calcarifer (barramundi perch): 108897142
Entry
108897142         CDS       T04895                                 
Name
(RefSeq) ribosomal RNA processing protein 1 homolog A
  KO
K14849  ribosomal RNA-processing protein 1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lcf01009]
    108897142
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lcf03009]
    108897142
Protein phosphatases and associated proteins [BR:lcf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108897142
Ribosome biogenesis [BR:lcf03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    108897142
SSDB
Motif
Pfam: Nop52
Other DBs
NCBI-GeneID: 108897142
NCBI-ProteinID: XP_018552110
UniProt: A0A4W6DYC2
Position
LG1:complement(671085..685131)
AA seq 750 aa
MASLQEPEIQFAQKLASNEKSIRTKAIKKLRKYINVRSQKATGGFTGDELLKLWKGLFYC
LWMQDKPLLQEELSHQISTLIHSFHDIDGQFLYLESFLQTFKREWTGIDRLRMDKFFQLV
RFMFRQTFEMLKKKNWENSVVARFLELLMTQLLQSSSAAPIGLQFHFLDLYMTELAAVGS
AELTADQNLMFIEPFCRTAAKTKDLTLFRAICNSIFSTIIDQAPFAIEDLMKELKAAEDS
DSGQASEEDDEDQIKEKTSKPLSKKRTGKQINGSRSEAEEDDKEEQQEDEDEDELLHLEE
SDTELPCDDDDIVPVLQFDYVGLADKLFELASRSSTPSQNRQRLYKIIKVLRDLSEGIFP
QDEYPEEVSTDEDDEMFGSRKRMKRGGGHLEKDVEGTPAAKKIKGKKKEGSTLEKQNKDL
GKDESADLSPNNENKKKKKKKKAGQSRSAGSEENREGSKQGQILPQAPSVIKEIEDSPQC
SQAEDLEKEAEAQSSISSVKVTEAAIPQDQSKTLFLSEAKKEQLVTVRKEASHPKPRTTD
NKDQSETFSKKKKKRDTSEPKPEITEEQQTPATTKPEMLPEASAPVSGKKKKKSLKAELQ
TDVTEAQSQFNPEAEITSVSCEASGGETMTAAPKTDAAISAKKKKKGTKAERKPEGSEGE
SQIYGVNLEEDATSICCEDSAEDDTITRLNKPTDGVISAKKKSKKKSLEADVQVEIQGRN
TDTKITPEASQHTMVVPLKKKTKKKGKGET
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggcgtcgcttcaggagccagagatccagttcgcacaaaaattagcatccaacgagaag
tcaatccgaaccaaggccataaagaaacttaggaaatacataaatgtcaggtcacagaaa
gcgacaggcggattcacaggtgatgagctgctcaagctatggaagggtcttttctactgc
ctgtggatgcaggataaaccactgctccaggaggagttgtcacaccagatctccaccctc
atccacagtttccatgacattgacggacagtttttatacctggagagtttcctgcagacc
ttcaaaagagagtggactggtattgacaggttgcgcatggacaagttcttccagctggtt
cgcttcatgttcagacaaacttttgagatgctaaagaagaaaaactgggagaacagtgtg
gttgcaagatttctggagctgctgatgacacaactcctgcagagcagcagtgcggcaccc
attgggctgcagttccactttctggacctttacatgactgaactggcagctgtgggttca
gcagagctcactgctgatcagaatttgatgttcattgagccgttctgcagaacagcagcc
aaaactaaagatctgactcttttcagagccatctgcaacagcatcttcagcactattatt
gaccaggctcccttcgccattgaagatttgatgaaggagctgaaagcagcagaggactca
gactcaggacaggcttctgaagaggacgatgaagaccaaataaaagagaaaacaagcaaa
ccactcagcaagaaaaggacagggaagcagatcaatggcagtagatcagaagccgaggaa
gatgacaaggaggagcagcaggaggatgaggatgaggatgagcttcttcacttagaagag
tcagacacagagctgccatgtgatgatgatgacattgtaccagtccttcagtttgactat
gtgggcctggcagacaagctttttgagttagccagtcggagcagcacacccagccagaac
agacagagactctacaaaatcatcaaagtattgcgtgacctcagtgaaggcatctttcct
caggatgagtatccagaggaggtctccacagatgaggatgatgaaatgttcggcagcagg
aagaggatgaagagaggaggaggtcacttggagaaggatgtggaagggaccccagcagca
aagaaaattaaagggaagaaaaaggagggatccacactcgaaaagcaaaataaggacttg
ggtaaagatgaatctgcagacctaagccctaataatgaaaacaagaagaagaagaagaag
aagaaagcagggcagagtagaagtgcaggtagtgaagaaaatagagagggatccaaacag
ggacagatcttgcctcaggctcccagtgtaattaaggagattgaagacagtccacaatgt
tcacaagcagaagatttagaaaaggaagcagaggcgcaaagctccatctcatctgtaaaa
gtcacagaggcagctattccacaagatcagtcaaaaactctgttcctctctgaggcaaag
aaagagcagttagttacagtcaggaaagaagccagtcatccaaagccccgcaccactgac
aacaaggaccaatctgaaaccttttcaaagaagaagaaaaagagggacacttctgagccc
aaacctgagatcacagaggagcaacagactcctgccacgacaaagccagaaatgctgcca
gaagcaagtgctccagtctcagggaagaaaaaaaagaagagcctgaaagctgagttacag
acagatgtaactgaagctcagtcacaattcaatccagaagcagagatcacatcagtaagt
tgtgaagcatcaggaggagaaaccatgacggcagcaccgaagactgatgctgcaatctct
gccaagaagaaaaagaagggcacgaaggctgagaggaaacctgaggggagtgagggtgaa
tcacagatttatggtgtgaacttagaagaggatgccacatcaatatgctgtgaagattca
gcagaagatgacacaatcaccagactcaataaacctactgatggtgtaatttctgccaag
aagaagagtaagaaaaagagccttgaggctgatgtacaggttgaaatacagggaagaaac
acagatactaagatcacacctgaagcatcacaacataccatggtggttccacttaaaaag
aagacaaagaaaaagggaaaaggagaaacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

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