KEGG   Lates calcarifer (barramundi perch): 108899058
Entry
108899058         CDS       T04895                                 
Name
(RefSeq) proteasome activator complex subunit 4B
  KO
K06699  proteasome activator subunit 4
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf03050  Proteasome
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    108899058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:lcf03051]
    108899058
Proteasome [BR:lcf03051]
 Eukaryotic proteasome
  Regulatory particles
   PA200
    108899058
SSDB
Motif
Pfam: BLM10_mid DUF3437
Other DBs
NCBI-GeneID: 108899058
NCBI-ProteinID: XP_018554839
Position
LG23:13321287..13346644
AA seq 1475 aa
MRLLQRLPASVVRRVHRERHAAPSWITLVPECQRLRDEDLQEFTRSLIGAALLAMFSKTG
STDAAYALQNLALLTPELAIPPVLEKTYAAMETLTEPHTLTATLSCMIGMARSLVSPNNH
YPEGRAHVLPLLMGSLPGVDPNDFSKCMITFQFIATFTTLVPLVDCSSAPSRHSDLSEIE
KDLCFASAEFEDFVLQFLDRCFALIDSSTLEQTRDETETDTQTHLESLVELGLSSTVSTI
LTQCSTEVYKVALQKVYNFATSNIFETCVSGRMVADMCRAAAKCHPAESLRLFVPHCCSI
IFHITDNEELQSEEELDKELLWNLQLLSEVARVDGEQLLKYRGDLEQILCVCVRLRCKRA
YTLACSLLEHTLRSLSLIYPTEYRSTSGGFNSDLPIRDWGRAGDVAALGVCWHMPSTEEE
NFVFQLLSRLLHPELERIKGHVSGDQPMSREELLQSLAIVHHCLLGAGSMLPPLDGPHVS
DLVPSMVNLGEIKLYIGVDYDESRENYRESICQTMRLLLHHILEHSEDDTKSLFVIIKII
SDLMFFRGTHKKEFDSRWKSFTLVKKSMENRLHGKKQHIRALLIDRVLLQHEMRKLVVEG
SEYKVVHQELLCDLLLLSTSTYSQVRSRAQNVLTAALGTYNFSYRDLIPRILQLLSPQHT
TGMQQQLKGALYCLLCVHSGVCLASARDWDCVGEMWPTLVRCGLSPSMTLEKPSIGRLLD
DIIDRIHRQHDTIGIYFTVSERCIEIANQIAQSDSPLPSLEAPSVEELKEGLQRQRIRNV
VAARKYEKLVNDLLDCLEDRDLPWKFEHMATDLLSLLLREDHPLPPDAILYFTQSLIHDS
ISIRKVAISAMAGILKQLKRPRQKVAVKPSDISGIEDPEGVCVGDREGNRWLQYDSNNLP
LSQEQWDSQHYVEKTHWGYYSWPREMMIYAASEKPRDDLPYEEMSEGEKIIFEYFSDPEF
IDQLIEFLSLEDRKGKDSFNPRRFCLFKGLFRNYGDVFLPLLWPHLEQLASDPHESSQHC
VCEITAGLIRGSKLWSFSKVDRLWQLLCPLIRTALTNITVETYTDWGTCIATACEGRDPR
KLHWLFELLMESPLSGEGGSFRDASLLYVLQGGLAQQQWRVSELLHRLLSYLEPKLTQVY
KNVRERIGSVLTYIFMIDVALPHTRPTSSPHVAEFITRVLERLKPLTSEPEIHNHVHEEN
TQETDERTQAVKLLKTVLKWLMASAGRTFTTPVQQQLQLLPLLFKIAPVEIDESYDEMKQ
DARTCLSLMSQGLLYPEHIPLVLAALEEMAGSRSWHARYSVLTYLQIMVFYNLFTLLSVP
TEVSRIRKLVMQLLLDEQLEVRDMAGTTLSGLLQCQFFPLDSSLQTQLQTLSQTRLPKAR
GELASTDLVRRHAGVLGLSACILSSPYDVPDWMPQILMDLSDHLNDPQPIEMTVKKTLSE
FRRTHHDNWQEHRQCFTDDQLLVLTDLLVSPCYYA
NT seq 4428 nt   +upstreamnt  +downstreamnt
atgcggctgctacagcgtctccctgccagtgttgtgcgccgcgtgcaccgggaacgtcac
gctgcccccagctggatcacgctggttcctgagtgtcagaggctgagggatgaagacttg
caggagttcacccgcagcctcattggtgccgccctgctggccatgttcagtaaaaccggc
agtactgacgcagcctacgcgctacaaaacctggctctcctcacaccagaacttgccata
ccacctgtacttgagaagacttacgcagcgatggagacactgacggagccgcacaccctc
accgccactctcagctgcatgatcggcatggctcgcagcctggtttcccctaacaaccat
tacccagagggccgtgcacatgtgctcccgctgctcatgggctctctgccgggggtggac
cccaacgacttcagcaagtgcatgataacgttccagttcatcgccaccttcaccactctg
gtgcctttagtggattgttcttctgctccttctcggcacagcgatctctcagagattgag
aaagatctgtgttttgcctcagctgagtttgaagacttcgttcttcagttcctggacagg
tgttttgctctgatagacagcagtaccctggagcaaacgagagatgagacggagacagat
acccagactcatctggagagcctggtagagctgggcctgtcctctactgttagcaccatc
ctaacacagtgctccacagaagtatacaaggtggctctgcagaaggtgtataactttgcc
acctccaacatctttgagacgtgtgtgtcaggcaggatggtggctgacatgtgtcgagct
gcagcaaagtgtcatcccgctgagtctctccgtctgttcgtccctcactgctgcagcatc
attttccacattactgacaacgaggagttgcagagtgaagaggagctggataaggagctg
ttgtggaatctccagctgctctctgaggtagcccgtgtggatggtgaacagctgttaaaa
taccggggggacctggagcagatcctgtgtgtgtgcgtgcgtctgcgctgtaaacgggcg
tacactctcgcctgcagtttgctggagcacacactccggtcgctgtccctcatctatccc
accgagtaccgcagcacctctgggggctttaattctgacctccccatacgggactggggc
agagctggggatgtggcagccttgggtgtgtgttggcacatgcctagcacggaggaggag
aactttgttttccagctgttgtcccgcctcctgcaccccgagctggagcgaatcaagggt
cacgtctctggagatcagccaatgagcagggaggagctgttgcagagtcttgctattgtg
caccactgccttcttggagctggaagcatgctgccccctctggatggaccacacgtatct
gacctggtgccctccatggtgaacctgggggagatcaagctgtatataggtgttgactac
gatgagtcacgggagaactacagagagtccatctgccaaaccatgagactgctgctacat
cacatcttggagcactcagaggacgacacaaagtcactgtttgtcatcattaagatcatc
agtgacctcatgtttttccgaggtactcacaagaaggagtttgactcacgctggaaaagc
ttcactctcgtcaagaagtccatggaaaacaggcttcatgggaaaaagcagcacattaga
gccctgctcatcgaccgggttttactccagcacgagatgaggaagctggtggttgagggc
agtgaatataaagtggttcatcaggagctgctctgcgatctgctgctgctctctaccagc
acttacagccaggtacgcagcagggcccagaatgtgctgacagccgcgctgggaacctat
aacttctcctacagagacctaattccccgaatcctacaactgctctcaccacaacacacc
accggcatgcaacagcagttgaagggtgctctgtactgcctgctgtgtgtgcacagtggt
gtttgtctggccagcgcaagggactgggactgcgttggggagatgtggcccaccctggtc
cgctgcggcctgtcgccctcgatgaccctggagaagccgtccatcggtcgactcctcgac
gacatcatcgataggatccatcgccagcacgacaccatcgggatctattttacagtgtct
gagagatgtatagagatagccaatcaaatcgcacagtctgacagtcctttgcctagctta
gaggcaccgtctgtagaggagctgaaagaggggcttcagcgtcagcgaatcagaaacgtc
gttgctgcaaggaaatatgagaagctggtcaatgatctcttggactgccttgaagacaga
gacctgccctggaagtttgagcacatggccacagacctgctctctctcctgctgagagaa
gatcacccactgccccctgacgccatcctctacttcacacagagcctcatacatgactcc
atcagcatacgcaaggtggcgatctcagcaatggctgggatcctgaagcagctgaaacga
ccgagacagaaagtggcagtgaagccatcagatatcagtggcattgaggatccagagggt
gtgtgtgtaggggatcgcgaggggaatcgctggctgcagtacgacagcaacaacctacct
ctcagtcaggagcagtgggactctcagcactatgtggagaaaacacactggggctactac
tcatggccgagagaaatgatgatctatgcagcttctgaaaagccaagagatgacctgccg
tatgaggagatgagtgagggtgaaaaaatcatctttgaatatttctcagacccggagttt
attgaccagcttatagagtttctctctctggaggatcggaaaggaaaagacagcttcaac
ccccgacgtttctgtctcttcaaggggctgtttcgtaactatggagacgtgttcctgcca
ttgctgtggcctcacctggagcagctcgccagcgacccccatgagagctctcagcactgt
gtgtgtgagattactgcaggactaatcagaggcagcaaactctggagcttcagcaaggtg
gacaggttatggcagcttttgtgccctttgatcagaacagcattaaccaacatcacagtg
gaaacctacacagactggggcacctgcatcgctactgcctgtgagggccgggaccccagg
aaactccactggctgtttgagctgctgatggagagccccctcagtggagagggcggctca
ttcagggatgccagtttgttatatgtgcttcagggaggtctggcccagcagcagtggaga
gtttctgaactgctgcacaggctgctgtcttacctggagcccaaactcacccaggtgtat
aagaatgtcagggagcgcattggcagtgtcctgacctatatcttcatgatcgacgtggcc
ctgccccacacccggcccacctcctccccccacgtggcagagttcatcactcgggtccta
gagcgactcaagcccctcacatcggagccggagatccacaaccacgtccacgaggagaac
acccaggagacggacgagcgcacccaggctgtcaaactgctcaaaacggtgttgaaatgg
ttgatggcgagcgcagggcgaacttttaccactcctgttcagcagcaactacagctcttg
cctctactcttcaagattgccccagtggagattgatgagagctatgatgagatgaagcag
gatgcacgcacgtgtctctctctcatgtcccagggcctgctgtatcctgagcacatccct
ctggttctggcagccctggaagagatggcaggcagcagatcatggcacgcacgctactca
gtgctgacctacctccagatcatggttttctacaacttgtttaccctgctcagcgtgccc
accgaggtgtcccgcatccgaaagctggtgatgcagctgttgcttgacgagcagctcgag
gtgagggacatggcaggcaccaccctcagtggtttactgcagtgccagttctttcctctg
gactccagtctgcagacacagctccagacgctgagtcagactcgcctccccaaggccaga
ggagagctggcctccacggacttagtgcggcgccacgccggagtgctcgggctcagtgca
tgcatcctgtcgagcccctacgacgtcccagactggatgcctcagatactgatggacctg
agtgaccatctcaacgacccacagcctatagagatgactgtgaagaagaccctgtctgag
ttcaggcgcactcaccacgacaactggcaggagcatcggcaatgcttcactgacgatcag
ctgctggtgctcacagacctgctggtgtcgccctgttactacgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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