KEGG   Lates calcarifer (barramundi perch): 108901482
Entry
108901482         CDS       T04895                                 
Symbol
si:dkey-222f2.1
Name
(RefSeq) intermediate filament protein ON3
  KO
K07605  type II keratin, basic
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lcf04812]
    108901482 (si:dkey-222f2.1)
   04147 Exosome [BR:lcf04147]
    108901482 (si:dkey-222f2.1)
Cytoskeleton proteins [BR:lcf04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Types I and II: Acidic and basic keratins
     108901482 (si:dkey-222f2.1)
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   108901482 (si:dkey-222f2.1)
  Exosomal proteins of other body fluids (saliva and urine)
   108901482 (si:dkey-222f2.1)
  Exosomal proteins of colorectal cancer cells
   108901482 (si:dkey-222f2.1)
  Exosomal proteins of bladder cancer cells
   108901482 (si:dkey-222f2.1)
SSDB
Motif
Pfam: Filament Keratin_2_head TPR_MLP1_2 CENP-F_leu_zip ADIP DUF720 BRE1 UPF0184 SBD_N Rootletin Ribosomal_S30AE DUF1664
Other DBs
NCBI-GeneID: 108901482
NCBI-ProteinID: XP_018558471
UniProt: A0A4W6DCJ9
Position
LG12:1639220..1646223
AA seq 447 aa
MSLSRTKRISSSSSMRSSSGSRRLSGFGPGQGGFTGVSLSSSSLYTGSNGHHHGLGAPLA
SLSVNKSLLAPLNLEIDPSLSMSRAHEKEQIKSLNNRFASFIDKVRFLEQQNKMLETKLE
LLQGQGVGRSNVEPLFEAYMAGLRRQMDLVNNDKTKLDGELRNMQGLVEDYKHKYEDEIN
KRNNLENDFVILKKDVDSAYLVKADLEDKVGALTDEINFLRNVYDEELRELQASIKDTSV
VVQMDNSRSLNMEQIVAEVKAQYEEIAARSREEAEAWYKSKFDQMSVQASQFGDELRIVK
GEVAEVNRLISRLQSEIEAVKAQRASLENQLAEAEERGELAVKEAKARTRDLEDALQRAK
QDMARQLREYQDLMNLKLALDIEIATYRKLLEGEEDRLGQQSILNIQAVSTYSTKSTNGY
HSNSSSPAPKLLIKTTETRDNSRYSTH
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagtctgagtcgtaccaagcggatcagctccagcagctccatgcggagcagcagcggg
tcgaggaggctgagcggcttcggtccgggtcagggcgggttcaccggcgtctccctgagt
agcagctctctgtacacgggctccaacgggcaccaccacggcctgggcgccccgctggcc
tccctgtctgtcaacaagagcctgctggcccccctcaacctggagatcgaccccagcctg
tccatgagccgagcccacgagaaggagcagatcaagagcctcaacaaccgcttcgccagc
ttcatagataaggtgcgtttcctggagcagcagaataagatgcttgagacgaagctggag
ctgctgcagggccagggcgtgggccgctccaatgtggagcccctgtttgaggcctacatg
gcgggcctgaggcgccaaatggacctggtcaacaacgacaagaccaaactggatggggag
ctgaggaacatgcagggcctggtagaggactacaaacacaaatatgaggatgagattaac
aagagaaacaacctggagaatgactttgttatcctaaagaaggacgtagactctgcctac
ctggtgaaggcagatctggaagataaggtgggagctctgaccgacgaaatcaacttcctg
cgcaacgtctacgatgaggagctgcgtgagctgcaggcgagcatcaaagacacgtcagtg
gtggttcagatggacaacagtcgcagcctgaacatggagcagatcgtagccgaggtcaaa
gcccagtatgaggagattgctgcccgcagccgagaggaggccgaggcctggtacaagagc
aagttcgaccagatgtcggtgcaggccagccagtttggagacgaactccgcatcgtgaag
ggagaggtggccgaggtgaaccgcctgatcagccgactgcagagcgagatagaggccgtc
aaagctcagcgtgccagtctggagaaccagctcgccgaggcagaggagcgtggagagctg
gccgtgaaagaggccaaggcccggaccagagacctggaggatgcactgcagagagccaaa
caggacatggccaggcagctcagagagtaccaggacctgatgaacctgaaactggctctg
gacattgagatcgccacctacaggaagctgctggagggagaggaggacagactcgggcag
cagtccatcctcaacattcaggccgtctccacctacagtactaaaagtactaatggctac
cacagtaacagcagctcccctgctccaaaactgctgataaagacaactgagaccagagat
aacagcagatacagcacacactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (33)   

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