KEGG   Lates calcarifer (barramundi perch): 108902004
Entry
108902004         CDS       T04895                                 
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
  KO
K08518  syntaxin-binding protein 5
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108902004 (stxbp5b)
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    108902004 (stxbp5b)
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Tomosyn
    108902004 (stxbp5b)
SSDB
Motif
Pfam: LLGL ANAPC4_WD40 WD40 Lgl_C RAB3GAP2_N Synaptobrevin WD40_like
Other DBs
NCBI-GeneID: 108902004
NCBI-ProteinID: XP_018559212
UniProt: A0A4W6F1C6
Position
LG19:18924206..18950587
AA seq 1188 aa
MKKFNIRKVLDGLTAASSSSSAAAQPGTPRENDAVQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAVGTQTGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDSI
HLWNLRQKIPAILHSLKFSRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKSKKADYRYNYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNVRAPAKPAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVVIDLGQIGYPIFENPYPLTIHESPVTCCEYFADCPAELIPALYSVGSR
QKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
ERARGKEEKPSTDIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIVYRFSKQEITTEVVQL
LEVRMQCEFSDVDSPDPGGEQTPTLLTPGASSSPQETELPTQPSTGSNSSDGPRDNIPCL
QVRSSPLKQSPGYQVELVIQLVWVSGEPPQQITSLAINSSYGLVVFGNSNGLAVVDYLQK
TLLLNMGTSELYSPSDPYQRQPRSPRKARQPSGALCDSNDGSNASEDRCKSPTSGSTSPC
NSDDERKQKFIEKVKFKSRRFSKTVANDFAKMSRKISSSSEQKPDLEERFQRWRSRTCKK
RFYCMNEGKAEARMSQKAVVCRTKSAPNSYAKDNSFTRSRSSSVTSIERESREAISSFHF
CESFPRKTDSLLSPCLLVGTTQGSVMMVALSLPPGGDQRLQQPVGISSCGTVVRLKGGIL
TMALLDSTGTLLPPSYEPWYDPNASDEEKEKSRRRRPASPPSSQEGQDSQFAVLCSEKQA
KVVAMPSQTRVYKHNITETSFVLRADVVQMGGANCIACFCANGHIMTLSLPSLRPLLDVN
YLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNLQEMLSELFTPVETPEAP
NRGFFKGLFGGGAQSLDREDLFGETAAGKASRSLAQHIPGPGSMEGMKGAASGVVGELAR
ARIALDERGQKLGELEERTAAMMASAESFSKHAHDMMLKYKDKKWYQL
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgaagaagtttaacattaggaaggtgctggacggcttgacagcggcgtcctcctcctcc
tccgccgccgctcagccgggtactcccagggaaaacgatgctgttcaggagactctccag
tcggagcattttcagctgtgcaagactgtgcgtcatggcttcccatatcaaccatcctca
atggcttttgaccctgtgcagaaaatcttggccgtcgggactcagactggagctttgagg
ctctttggccgtgctggtgtggagtgctactgtcagcacgagagcggtgctgctgtcatc
cagctccagttcctgatcaacgagggggcgctggtgagtgccttagctgatgacagcatc
cacctgtggaacctgaggcaaaaaatcccagctatcctgcattctctcaagttcagcagg
gagaggatcacatactgccacctgcccttccagagcaaatggctttacattggcacagaa
agaggaaacatccacatcgtcaacgtggagtccttcactctctcaggctacgtcatcatg
tggaacaaagccatcgaactatccaccaagacacacccagggcctgttgtgcacatcagt
gacaaccccatggatgagggaaagcttctgattggatttgagtgtggggtagtggtgttg
tgggatctgaagtccaaaaaagctgactaccgctacaattatgatgaggcgatccactca
gtcgcttggcaccatgagggtaaacagtttgtttgcagccactcagatggcactctgacc
acatggaatgtacgagctccagccaagcctgcacagatcatcacaccacatggaaagcag
cctaaggatggaaaaaagccagaaccatgtaagcctatcctgaaggtggagtacaaaaca
acgagggctggggacccattcatggtcttgtctggaggtctgtcttacgacacagttggg
aggagagcctgtctgactgtgatgcacggaaagagcactgccgtcctcgagatggactac
cccattgtagatttcctaacgctgtgcgaaactccatatccaaatgactttcaggagcct
tatgctgtggtggtcctgctcgagaaggatttagttgtaatagacctcggacagattggt
tacccaatatttgagaatccatatcctctgactatccatgagtcaccagtgacctgctgt
gagtactttgccgactgccccgctgaacttattcctgcactttactctgtcggcagtcgg
caaaagagacaaggttacagcaagaaggaatggcccattagtgggggaaactggggccaa
ggcacacagagttacccagagatcataatcacaggacatgctgatgggtcaatcaaattt
tgggacgcttctgcactaatgcttcaagtgctgtacaagctgaagactgccaaggtgttt
gagagagctcgtggtaaagaggagaagccaagtacagatatagtagaagaggacccattt
gccatccagactttatcttggtgccctgagagcaggatgctctgtgtggctggagtgtct
gcccacgttatcgtctataggttcagcaaacaagaaatcaccactgaagttgtgcagctt
ctggaggtgcggatgcagtgtgagtttagcgacgtggactctcctgatccagggggggag
cagactcccaccctgctgacccccggagcctcctccagccctcaggagactgaactgccc
actcagccgtccacaggcagcaactcttcagacggaccccgggacaatataccatgcctg
caggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtgatccag
ctggtgtgggtgagcggggagccacctcagcagatcaccagcctggctatcaactcctcc
tacggccttgtggtgtttggaaacagtaacggtctggctgtggtggactacctccagaaa
actctgctcctcaacatgggcacatcagagctgtacagcccatccgacccctaccagagg
cagcctcgctccccgcgcaaagcacgacagccctctggagcactttgcgactccaacgat
ggatctaatgcctcagaggaccgctgcaagtcacctacttcaggatctacctcaccatgc
aattcagatgatgaacgaaaacagaagttcatagagaaggtgaagttcaaaagcagacgc
ttttccaagacggttgccaatgactttgccaagatgtcacggaaaattagctcgtctagt
gagcaaaagccagacctggaggagaggttccaacgatggcgctctcgcacatgtaagaag
cgcttttattgtatgaacgagggcaaagcagaagccaggatgagccagaaggcggtcgta
tgtagaactaagtctgcccccaactcctatgccaaggataactcattcacccgctcacgt
agttcaagtgtaaccagcatagagagagagtcccgagaggccatctcctcctttcacttc
tgtgagagttttccccggaagacggacagcctgctcagcccctgtctgctagtgggaacc
acccagggctctgtgatgatggtggccctcagcctgccgcctggcggggaccagaggctg
cagcaaccagtcggcatctcctcctgcggcactgtagtcagacttaagggaggcattttg
acgatggccctgctggactctactggaactctgctgcccccttcctacgagccatggtat
gacccaaatgcctcagatgaggagaaggagaagagccggaggcgcaggccagcctcccct
ccctcatctcaagagggtcaagactcccagtttgccgtgctgtgttcggaaaaacaggcc
aaggtggtggcgatgccgtctcaaacccgcgtctacaaacacaacatcacagagacctcc
ttcgtgctaagggctgatgttgtacagatgggcggagcaaactgcatcgcctgtttctgt
gctaatggacacatcatgactctgagtttgcccagtctacggcctctgctggatgtgaac
tacctgccgctgacagacatgcggatagccagaacgttctgcttctccaacctaggtcaa
gccctgtatctcacctctcccaccgagatccagaggatcacctacagccaggagacctgc
gacaacctgcaggaaatgctcagtgagttatttacccctgtggagacaccagaggctcct
aacagaggtttcttcaaaggtctttttggtggaggggctcagtctctggacagggaggac
ctctttggtgagacggctgctggtaaggcctctcgtagccttgcccagcacatccctggc
ccgggcagcatggagggcatgaagggtgcagcgtcgggggttgtgggagagctggcccgt
gctcggatagctctggacgagagagggcagaaactgggcgagctggaggagagaacggca
gccatgatggccagcgcagagtccttctccaaacatgcccatgatatgatgctgaagtac
aaagataagaagtggtaccagctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (41)   

Download RDF
DBGET integrated database retrieval system